RNA–Protein interactions for RNA: ENST00000593639.5

SRRM1-221, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-221ENST00000593639 PPP2R5CQ13362 524 aa10.23□□□□□ -0.77
SRRM1-221ENST00000593639 COL9A2Q14055 689 aaPredicted RBP10.23□□□□□ -0.77
SRRM1-221ENST00000593639 RAB33AQ14088 237 aa10.23□□□□□ -0.77
SRRM1-221ENST00000593639 GRM2Q14416 872 aa10.23□□□□□ -0.77
SRRM1-221ENST00000593639 PCBP1Q15365 356 aaKnown RBP eCLIP10.23□□□□□ -0.77
SRRM1-221ENST00000593639 CSRP2Q16527 193 aa10.23□□□□□ -0.77
SRRM1-221ENST00000593639 TSGA10IPQ3SY00 556 aa10.23□□□□□ -0.77
SRRM1-221ENST00000593639 IFNLR1Q8IU57 520 aaPredicted RBP10.23□□□□□ -0.77
SRRM1-221ENST00000593639 EXOC8Q8IYI6 725 aa10.23□□□□□ -0.77
SRRM1-221ENST00000593639 HACE1Q8IYU2 909 aa10.23□□□□□ -0.77
SRRM1-221ENST00000593639 ASAP3Q8TDY4 903 aa10.23□□□□□ -0.77
SRRM1-221ENST00000593639 TCP11Q8WWU5 503 aa10.23□□□□□ -0.77
SRRM1-221ENST00000593639 MTRQ99707 1265 aa10.23□□□□□ -0.77
SRRM1-221ENST00000593639 SLC26A6Q9BXS9 759 aa10.23□□□□□ -0.77
SRRM1-221ENST00000593639 RNF26Q9BY78 433 aaPredicted RBP10.23□□□□□ -0.77
SRRM1-221ENST00000593639 XPNPEP1Q9NQW7 623 aa10.23□□□□□ -0.77
SRRM1-221ENST00000593639 GDE1Q9NZC3 331 aa10.23□□□□□ -0.77
SRRM1-221ENST00000593639 PARP2Q9UGN5 583 aa10.23□□□□□ -0.77
SRRM1-221ENST00000593639 DDX25Q9UHL0 483 aaKnown RBP10.23□□□□□ -0.77
SRRM1-221ENST00000593639 ANGPTL2Q9UKU9 493 aa10.23□□□□□ -0.77
SRRM1-221ENST00000593639 ANKRD11Q6UB99 2663 aaPredicted RBP10.23□□□□□ -0.77
SRRM1-221ENST00000593639 NID2Q14112 1375 aa10.23□□□□□ -0.77
SRRM1-221ENST00000593639 DKC1O60832 514 aaKnown RBP eCLIP10.22□□□□□ -0.77
SRRM1-221ENST00000593639 NPTXRO95502 500 aa10.22□□□□□ -0.77
SRRM1-221ENST00000593639 P4HBP07237 508 aaKnown RBP10.22□□□□□ -0.77
SRRM1-221ENST00000593639 RHOP08100 348 aa10.22□□□□□ -0.77
SRRM1-221ENST00000593639 IGFBP6P24592 240 aaPredicted RBP10.22□□□□□ -0.77
SRRM1-221ENST00000593639 OR1D2P34982 312 aa10.22□□□□□ -0.77
SRRM1-221ENST00000593639 CCR3P51677 355 aa10.22□□□□□ -0.77
SRRM1-221ENST00000593639 FGD1P98174 961 aa10.22□□□□□ -0.77
SRRM1-221ENST00000593639 TUSC3Q13454 348 aa10.22□□□□□ -0.77
SRRM1-221ENST00000593639 CAPSQ13938 189 aa10.22□□□□□ -0.77
SRRM1-221ENST00000593639 SIM2Q14190 667 aaPredicted RBP10.22□□□□□ -0.77
SRRM1-221ENST00000593639 GAS6Q14393 721 aa10.22□□□□□ -0.77
SRRM1-221ENST00000593639 UVSSAQ2YD98 709 aa10.22□□□□□ -0.77
SRRM1-221ENST00000593639 N4BP2L1Q5TBK1 243 aaPredicted RBP10.22□□□□□ -0.77
SRRM1-221ENST00000593639 MOXD1Q6UVY6 613 aa10.22□□□□□ -0.77
SRRM1-221ENST00000593639 Q6ZUG5 572 aa10.22□□□□□ -0.77
SRRM1-221ENST00000593639 C4orf19Q8IY42 314 aa10.22□□□□□ -0.77
SRRM1-221ENST00000593639 DNASE1L2Q92874 299 aa10.22□□□□□ -0.77
SRRM1-221ENST00000593639 BRF1Q92994 677 aa10.22□□□□□ -0.77
SRRM1-221ENST00000593639 ELSPBP1Q96BH3 223 aa10.22□□□□□ -0.77
SRRM1-221ENST00000593639 LXNQ9BS40 222 aa10.22□□□□□ -0.77
SRRM1-221ENST00000593639 C22orf23Q9BZE7 217 aa10.22□□□□□ -0.77
SRRM1-221ENST00000593639 CXCL16Q9H2A7 254 aa10.22□□□□□ -0.77
SRRM1-221ENST00000593639 LMAN1LQ9HAT1 526 aa10.22□□□□□ -0.77
SRRM1-221ENST00000593639 KCNMB3Q9NPA1 279 aa10.22□□□□□ -0.77
SRRM1-221ENST00000593639 RGL1Q9NZL6 768 aa10.22□□□□□ -0.77
SRRM1-221ENST00000593639 PCDHA4Q9UN74 947 aa10.22□□□□□ -0.77
SRRM1-221ENST00000593639 FASNP49327 2511 aaKnown RBP10.22□□□□□ -0.77
SRRM1-221ENST00000593639 WDFY3Q8IZQ1 3526 aa10.21□□□□□ -0.77
SRRM1-221ENST00000593639 A0A1B0GUA9 196 aa10.21□□□□□ -0.77
SRRM1-221ENST00000593639 CHURC1-FNTBB4DL54 471 aa10.21□□□□□ -0.77
SRRM1-221ENST00000593639 MAN2B1O00754 1011 aa10.21□□□□□ -0.77
SRRM1-221ENST00000593639 PTGESO14684 152 aa10.21□□□□□ -0.77
SRRM1-221ENST00000593639 CHRNB1P11230 501 aa10.21□□□□□ -0.77
SRRM1-221ENST00000593639 HOXB3P14651 431 aaPredicted RBP10.21□□□□□ -0.77
SRRM1-221ENST00000593639 IFNAR1P17181 557 aa10.21□□□□□ -0.77
SRRM1-221ENST00000593639 FNTBP49356 437 aa10.21□□□□□ -0.77
SRRM1-221ENST00000593639 SHC2P98077 582 aa10.21□□□□□ -0.77
SRRM1-221ENST00000593639 MXD4Q14582 209 aaPredicted RBP10.21□□□□□ -0.77
SRRM1-221ENST00000593639 PPP2R5DQ14738 602 aa10.21□□□□□ -0.77
SRRM1-221ENST00000593639 NPY5RQ15761 445 aa10.21□□□□□ -0.77
SRRM1-221ENST00000593639 XKR9Q5GH70 373 aa10.21□□□□□ -0.77
SRRM1-221ENST00000593639 FAM78AQ5JUQ0 283 aa10.21□□□□□ -0.77
SRRM1-221ENST00000593639 SLC27A1Q6PCB7 646 aa10.21□□□□□ -0.77
SRRM1-221ENST00000593639 FAM3CQ92520 227 aa10.21□□□□□ -0.77
SRRM1-221ENST00000593639 IER2Q9BTL4 223 aa10.21□□□□□ -0.77
SRRM1-221ENST00000593639 SLKQ9H2G2 1235 aaPredicted RBP10.21□□□□□ -0.77
SRRM1-221ENST00000593639 BRD9Q9H8M2 597 aa10.21□□□□□ -0.77
SRRM1-221ENST00000593639 NCOA5Q9HCD5 579 aaKnown RBP10.21□□□□□ -0.77
SRRM1-221ENST00000593639 SH3GLB2Q9NR46 395 aa10.21□□□□□ -0.77
SRRM1-221ENST00000593639 MTRRQ9UBK8 725 aa10.21□□□□□ -0.77
SRRM1-221ENST00000593639 ZMYM2Q9UBW7 1377 aa10.21□□□□□ -0.78
SRRM1-221ENST00000593639 PATJQ8NI35 1801 aa10.21□□□□□ -0.78
SRRM1-221ENST00000593639 TM4SF5O14894 197 aa10.2□□□□□ -0.78
SRRM1-221ENST00000593639 HMGB1P09429 215 aaKnown RBP10.2□□□□□ -0.78
SRRM1-221ENST00000593639 FGFR3P22607 806 aa10.2□□□□□ -0.78
SRRM1-221ENST00000593639 GLRA2P23416 452 aa10.2□□□□□ -0.78
SRRM1-221ENST00000593639 HOXC13P31276 330 aa10.2□□□□□ -0.78
SRRM1-221ENST00000593639 ARL2P36404 184 aa10.2□□□□□ -0.78
SRRM1-221ENST00000593639 CXCL12P48061 93 aa10.2□□□□□ -0.78
SRRM1-221ENST00000593639 CYP4A11Q02928 519 aa10.2□□□□□ -0.78
SRRM1-221ENST00000593639 POU5F1BQ06416 359 aa10.2□□□□□ -0.78
SRRM1-221ENST00000593639 TFDP1Q14186 410 aa10.2□□□□□ -0.78
SRRM1-221ENST00000593639 CTTNQ14247 550 aaKnown RBP10.2□□□□□ -0.78
SRRM1-221ENST00000593639 KRT32Q14532 448 aa10.2□□□□□ -0.78
SRRM1-221ENST00000593639 EPHA7Q15375 998 aa10.2□□□□□ -0.78
SRRM1-221ENST00000593639 NAB2Q15742 525 aa10.2□□□□□ -0.78
SRRM1-221ENST00000593639 INF2Q27J81 1249 aa10.2□□□□□ -0.78
SRRM1-221ENST00000593639 PRSS36Q5K4E3 855 aa10.2□□□□□ -0.78
SRRM1-221ENST00000593639 PDXDC1Q6P996 788 aa10.2□□□□□ -0.78
SRRM1-221ENST00000593639 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.2□□□□□ -0.78
SRRM1-221ENST00000593639 RTL10Q7L3V2 364 aa10.2□□□□□ -0.78
SRRM1-221ENST00000593639 OTUD6AQ7L8S5 288 aa10.2□□□□□ -0.78
SRRM1-221ENST00000593639 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.2□□□□□ -0.78
SRRM1-221ENST00000593639 MAP4K3Q8IVH8 894 aa10.2□□□□□ -0.78
SRRM1-221ENST00000593639 BLIDQ8IZY5 108 aa10.2□□□□□ -0.78
SRRM1-221ENST00000593639 DDX1Q92499 740 aaKnown RBP10.2□□□□□ -0.78
SRRM1-221ENST00000593639 HAS1Q92839 578 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms