RNA–Protein interactions for RNA: ENST00000593223.1

SMAD4-216, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-216ENST00000593223 SP140Q13342 867 aa6.35□□□□□ -1.39
SMAD4-216ENST00000593223 NRN1LQ496H8 165 aa6.35□□□□□ -1.39
SMAD4-216ENST00000593223 SPDYAQ5MJ70 313 aa6.35□□□□□ -1.39
SMAD4-216ENST00000593223 TMEM240Q5SV17 173 aa6.35□□□□□ -1.39
SMAD4-216ENST00000593223 Q6ZRM9 215 aa6.35□□□□□ -1.39
SMAD4-216ENST00000593223 DOK3Q7L591 496 aa6.35□□□□□ -1.39
SMAD4-216ENST00000593223 ZNF572Q7Z3I7 529 aaPredicted RBP6.35□□□□□ -1.39
SMAD4-216ENST00000593223 CMTR2Q8IYT2 770 aaKnown RBP6.35□□□□□ -1.39
SMAD4-216ENST00000593223 TFAP2CQ92754 450 aa6.35□□□□□ -1.39
SMAD4-216ENST00000593223 LSM14BQ9BX40 385 aaKnown RBP6.35□□□□□ -1.39
SMAD4-216ENST00000593223 POGKQ9P215 609 aa6.35□□□□□ -1.39
SMAD4-216ENST00000593223 SERPINB13Q9UIV8 391 aa6.35□□□□□ -1.39
SMAD4-216ENST00000593223 SIK3Q9Y2K2 1263 aa6.35□□□□□ -1.39
SMAD4-216ENST00000593223 TESMINQ9Y4I5 508 aa6.35□□□□□ -1.39
SMAD4-216ENST00000593223 E2F8A0AVK6 867 aa6.34□□□□□ -1.39
SMAD4-216ENST00000593223 TEX33O43247 280 aa6.34□□□□□ -1.39
SMAD4-216ENST00000593223 DTNBO60941 627 aa6.34□□□□□ -1.39
SMAD4-216ENST00000593223 ZRANB2O95218 330 aaKnown RBP eCLIP6.34□□□□□ -1.39
SMAD4-216ENST00000593223 RPLP2P05387 115 aaKnown RBP6.34□□□□□ -1.39
SMAD4-216ENST00000593223 PF4V1P10720 104 aa6.34□□□□□ -1.39
SMAD4-216ENST00000593223 ZSCAN20P17040 1043 aaPredicted RBP6.34□□□□□ -1.39
SMAD4-216ENST00000593223 VCAM1P19320 739 aa6.34□□□□□ -1.39
SMAD4-216ENST00000593223 ACRV1P26436 265 aa6.34□□□□□ -1.39
SMAD4-216ENST00000593223 SLC6A9P48067 706 aa6.34□□□□□ -1.39
SMAD4-216ENST00000593223 RAB27AP51159 221 aa6.34□□□□□ -1.39
SMAD4-216ENST00000593223 SCNN1GP51170 649 aa6.34□□□□□ -1.39
SMAD4-216ENST00000593223 RAP2BP61225 183 aa6.34□□□□□ -1.39
SMAD4-216ENST00000593223 PIN1Q13526 163 aaPredicted RBP6.34□□□□□ -1.39
SMAD4-216ENST00000593223 IL10RAQ13651 578 aa6.34□□□□□ -1.39
SMAD4-216ENST00000593223 RRP1BQ14684 758 aaKnown RBP6.34□□□□□ -1.39
SMAD4-216ENST00000593223 R3HDM1Q15032 1099 aaKnown RBP6.34□□□□□ -1.39
SMAD4-216ENST00000593223 C3orf36Q3SXR2 165 aa6.34□□□□□ -1.39
SMAD4-216ENST00000593223 USP39Q53GS9 565 aaKnown RBP6.34□□□□□ -1.39
SMAD4-216ENST00000593223 RRP12Q5JTH9 1297 aaKnown RBP6.34□□□□□ -1.39
SMAD4-216ENST00000593223 AFMIDQ63HM1 303 aa6.34□□□□□ -1.39
SMAD4-216ENST00000593223 ANKS6Q68DC2 871 aa6.34□□□□□ -1.39
SMAD4-216ENST00000593223 PPP4R3AQ6IN85 833 aa6.34□□□□□ -1.39
SMAD4-216ENST00000593223 EFCAB12Q6NXP0 572 aa6.34□□□□□ -1.39
SMAD4-216ENST00000593223 C1orf210Q8IVY1 113 aa6.34□□□□□ -1.39
SMAD4-216ENST00000593223 ZFP28Q8NHY6 868 aa6.34□□□□□ -1.39
SMAD4-216ENST00000593223 SH3RF3Q8TEJ3 882 aaPredicted RBP6.34□□□□□ -1.39
SMAD4-216ENST00000593223 RAB24Q969Q5 203 aa6.34□□□□□ -1.39
SMAD4-216ENST00000593223 MNTQ99583 582 aa6.34□□□□□ -1.39
SMAD4-216ENST00000593223 KRTAP3-1Q9BYR8 98 aa6.34□□□□□ -1.39
SMAD4-216ENST00000593223 ZNF180Q9UJW8 692 aa6.34□□□□□ -1.39
SMAD4-216ENST00000593223 RUVBL1Q9Y265 456 aaKnown RBP6.34□□□□□ -1.39
SMAD4-216ENST00000593223 ANKRD6Q9Y2G4 727 aa6.34□□□□□ -1.39
SMAD4-216ENST00000593223 IPPQ9Y573 584 aa6.34□□□□□ -1.39
SMAD4-216ENST00000593223 ACTL7AQ9Y615 435 aa6.34□□□□□ -1.39
SMAD4-216ENST00000593223 MYBBP1AQ9BQG0 1328 aaKnown RBP6.33□□□□□ -1.4
SMAD4-216ENST00000593223 TBKBP1A7MCY6 615 aa6.33□□□□□ -1.4
SMAD4-216ENST00000593223 AKAP10O43572 662 aa6.33□□□□□ -1.4
SMAD4-216ENST00000593223 SNRPA1P09661 255 aaKnown RBP6.33□□□□□ -1.4
SMAD4-216ENST00000593223 ALOX15P16050 662 aaPredicted RBP6.33□□□□□ -1.4
SMAD4-216ENST00000593223 ATP5JP18859 108 aa6.33□□□□□ -1.4
SMAD4-216ENST00000593223 DDCP20711 480 aa6.33□□□□□ -1.4
SMAD4-216ENST00000593223 GUCY1A2P33402 732 aa6.33□□□□□ -1.4
SMAD4-216ENST00000593223 CLRN1P58418 232 aa6.33□□□□□ -1.4
SMAD4-216ENST00000593223 CDSNQ15517 529 aa6.33□□□□□ -1.4
SMAD4-216ENST00000593223 ATP2B3Q16720 1220 aa6.33□□□□□ -1.4
SMAD4-216ENST00000593223 DCAF17Q5H9S7 520 aaPredicted RBP6.33□□□□□ -1.4
SMAD4-216ENST00000593223 RNF169Q8NCN4 708 aa6.33□□□□□ -1.4
SMAD4-216ENST00000593223 SLC35B2Q8TB61 432 aa6.33□□□□□ -1.4
SMAD4-216ENST00000593223 JDP2Q8WYK2 163 aa6.33□□□□□ -1.4
SMAD4-216ENST00000593223 EXTL1Q92935 676 aa6.33□□□□□ -1.4
SMAD4-216ENST00000593223 KAT5Q92993 513 aa6.33□□□□□ -1.4
SMAD4-216ENST00000593223 TMX3Q96JJ7 454 aa6.33□□□□□ -1.4
SMAD4-216ENST00000593223 MRI1Q9BV20 369 aa6.33□□□□□ -1.4
SMAD4-216ENST00000593223 KRTAP9-3Q9BYQ3 159 aa6.33□□□□□ -1.4
SMAD4-216ENST00000593223 CPEB1Q9BZB8 566 aaKnown RBP6.33□□□□□ -1.4
SMAD4-216ENST00000593223 AURKAIP1Q9NWT8 199 aaPredicted RBP6.33□□□□□ -1.4
SMAD4-216ENST00000593223 TCEAL9Q9UHQ7 104 aa6.33□□□□□ -1.4
SMAD4-216ENST00000593223 G3BP2Q9UN86 482 aaKnown RBP6.33□□□□□ -1.4
SMAD4-216ENST00000593223 PCF11O94913 1555 aaKnown RBP6.32□□□□□ -1.4
SMAD4-216ENST00000593223 MAPKBP1O60336 1514 aa6.32□□□□□ -1.4
SMAD4-216ENST00000593223 CXorf49A8MYA2 514 aaPredicted RBP6.32□□□□□ -1.4
SMAD4-216ENST00000593223 PJA2O43164 708 aa6.32□□□□□ -1.4
SMAD4-216ENST00000593223 FPR1P21462 350 aa6.32□□□□□ -1.4
SMAD4-216ENST00000593223 EDNRBP24530 442 aa6.32□□□□□ -1.4
SMAD4-216ENST00000593223 ALDH1A3P47895 512 aa6.32□□□□□ -1.4
SMAD4-216ENST00000593223 RABGGTBP53611 331 aa6.32□□□□□ -1.4
SMAD4-216ENST00000593223 CREMQ03060 361 aa6.32□□□□□ -1.4
SMAD4-216ENST00000593223 VPS72Q15906 364 aa6.32□□□□□ -1.4
SMAD4-216ENST00000593223 BMT2Q1RMZ1 405 aa6.32□□□□□ -1.4
SMAD4-216ENST00000593223 KRTAP5-3Q6L8H2 238 aa6.32□□□□□ -1.4
SMAD4-216ENST00000593223 DRC7Q8IY82 874 aa6.32□□□□□ -1.4
SMAD4-216ENST00000593223 OR52N2Q8NGI0 321 aa6.32□□□□□ -1.4
SMAD4-216ENST00000593223 CASKIN2Q8WXE0 1202 aa6.32□□□□□ -1.4
SMAD4-216ENST00000593223 JPH3Q8WXH2 748 aaPredicted RBP6.32□□□□□ -1.4
SMAD4-216ENST00000593223 PHACTR3Q96KR7 559 aa6.32□□□□□ -1.4
SMAD4-216ENST00000593223 FAM193BQ96PV7 902 aaPredicted RBP6.32□□□□□ -1.4
SMAD4-216ENST00000593223 ZIM2Q9NZV7 527 aa6.32□□□□□ -1.4
SMAD4-216ENST00000593223 KRTAP23-1A1A580 65 aa6.31□□□□□ -1.4
SMAD4-216ENST00000593223 ABLIM3O94929 683 aa6.31□□□□□ -1.4
SMAD4-216ENST00000593223 AMY1AP04745 511 aa6.31□□□□□ -1.4
SMAD4-216ENST00000593223 INSRRP14616 1297 aa6.31□□□□□ -1.4
SMAD4-216ENST00000593223 MGAT1P26572 445 aa6.31□□□□□ -1.4
SMAD4-216ENST00000593223 PCSK1P29120 753 aa6.31□□□□□ -1.4
SMAD4-216ENST00000593223 CDC42EP1Q00587 391 aa6.31□□□□□ -1.4
SMAD4-216ENST00000593223 METTL24Q5JXM2 366 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms