RNA–Protein interactions for RNA: ENST00000592839.6

SF3A2-207, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 2

Gene SF3A2, Length 724 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-207ENST00000592839 GRIN1Q05586 938 aa16.31■□□□□ 0.2
SF3A2-207ENST00000592839 MCL1Q07820 350 aa16.31■□□□□ 0.2
SF3A2-207ENST00000592839 LLGL2Q6P1M3 1020 aa16.31■□□□□ 0.2
SF3A2-207ENST00000592839 PDXDC1Q6P996 788 aa16.31■□□□□ 0.2
SF3A2-207ENST00000592839 ZDHHC14Q8IZN3 488 aa16.31■□□□□ 0.2
SF3A2-207ENST00000592839 RAD54LQ92698 747 aa16.31■□□□□ 0.2
SF3A2-207ENST00000592839 CDK5RAP3Q96JB5 506 aa16.31■□□□□ 0.2
SF3A2-207ENST00000592839 SNX27Q96L92 541 aa16.31■□□□□ 0.2
SF3A2-207ENST00000592839 PAAF1Q9BRP4 392 aa16.31■□□□□ 0.2
SF3A2-207ENST00000592839 KCNH6Q9H252 994 aa16.31■□□□□ 0.2
SF3A2-207ENST00000592839 CXCL16Q9H2A7 254 aa16.31■□□□□ 0.2
SF3A2-207ENST00000592839 PLEKHA4Q9H4M7 779 aa16.31■□□□□ 0.2
SF3A2-207ENST00000592839 ZSCAN16Q9H4T2 348 aaPredicted RBP16.31■□□□□ 0.2
SF3A2-207ENST00000592839 POMKQ9H5K3 350 aa16.31■□□□□ 0.2
SF3A2-207ENST00000592839 TOPORSQ9NS56 1045 aaPredicted RBP16.31■□□□□ 0.2
SF3A2-207ENST00000592839 KLK14Q9P0G3 267 aa16.31■□□□□ 0.2
SF3A2-207ENST00000592839 FBXO2Q9UK22 296 aaPredicted RBP16.31■□□□□ 0.2
SF3A2-207ENST00000592839 NR2E1Q9Y466 385 aa16.31■□□□□ 0.2
SF3A2-207ENST00000592839 ZDBF2Q9HCK1 2354 aa16.31■□□□□ 0.2
SF3A2-207ENST00000592839 CCDC169A6NNP5 214 aa16.3■□□□□ 0.2
SF3A2-207ENST00000592839 KIF4AO95239 1232 aa16.3■□□□□ 0.2
SF3A2-207ENST00000592839 ADRB2P07550 413 aa16.3■□□□□ 0.2
SF3A2-207ENST00000592839 UPP1Q16831 310 aa16.3■□□□□ 0.2
SF3A2-207ENST00000592839 ZNF568Q3ZCX4 644 aa16.3■□□□□ 0.2
SF3A2-207ENST00000592839 CD300LGQ6UXG3 332 aa16.3■□□□□ 0.2
SF3A2-207ENST00000592839 RTL10Q7L3V2 364 aa16.3■□□□□ 0.2
SF3A2-207ENST00000592839 CEP120Q8N960 986 aa16.3■□□□□ 0.2
SF3A2-207ENST00000592839 REEP2Q9BRK0 252 aa16.3■□□□□ 0.2
SF3A2-207ENST00000592839 CCDC94Q9BW85 323 aaPredicted RBP16.3■□□□□ 0.2
SF3A2-207ENST00000592839 TARS2Q9BW92 718 aaKnown RBP16.3■□□□□ 0.2
SF3A2-207ENST00000592839 POLD4Q9HCU8 107 aa16.3■□□□□ 0.2
SF3A2-207ENST00000592839 ZDHHC7Q9NXF8 308 aa16.3■□□□□ 0.2
SF3A2-207ENST00000592839 STK17AQ9UEE5 414 aa16.3■□□□□ 0.2
SF3A2-207ENST00000592839 MUTYHQ9UIF7 546 aa16.3■□□□□ 0.2
SF3A2-207ENST00000592839 USP20Q9Y2K6 914 aa16.3■□□□□ 0.2
SF3A2-207ENST00000592839 SMIM28A0A1B0GU29 152 aa16.29■□□□□ 0.2
SF3A2-207ENST00000592839 VPS37CA5D8V6 355 aaPredicted RBP16.29■□□□□ 0.2
SF3A2-207ENST00000592839 SLC16A4O15374 487 aa16.29■□□□□ 0.2
SF3A2-207ENST00000592839 MEFVO15553 781 aaPredicted RBP16.29■□□□□ 0.2
SF3A2-207ENST00000592839 FAM189A1O60320 539 aa16.29■□□□□ 0.2
SF3A2-207ENST00000592839 GLUD1P00367 558 aa16.29■□□□□ 0.2
SF3A2-207ENST00000592839 PLCG1P19174 1290 aa16.29■□□□□ 0.2
SF3A2-207ENST00000592839 FGFR3P22607 806 aa16.29■□□□□ 0.2
SF3A2-207ENST00000592839 KLRC2P26717 231 aa16.29■□□□□ 0.2
SF3A2-207ENST00000592839 NASPP49321 788 aaPredicted RBP16.29■□□□□ 0.2
SF3A2-207ENST00000592839 PTPN21Q16825 1174 aa16.29■□□□□ 0.2
SF3A2-207ENST00000592839 RTP2Q5QGT7 225 aa16.29■□□□□ 0.2
SF3A2-207ENST00000592839 ATAT1Q5SQI0 421 aa16.29■□□□□ 0.2
SF3A2-207ENST00000592839 ELMSAN1Q6PJG2 1045 aa16.29■□□□□ 0.2
SF3A2-207ENST00000592839 DCLRE1AQ6PJP8 1040 aa16.29■□□□□ 0.2
SF3A2-207ENST00000592839 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.29■□□□□ 0.2
SF3A2-207ENST00000592839 LARP4BQ92615 738 aaKnown RBP16.29■□□□□ 0.2
SF3A2-207ENST00000592839 DDX27Q96GQ7 796 aaKnown RBP16.29■□□□□ 0.2
SF3A2-207ENST00000592839 TSPAN18Q96SJ8 248 aa16.29■□□□□ 0.2
SF3A2-207ENST00000592839 SLC38A7Q9NVC3 462 aa16.29■□□□□ 0.2
SF3A2-207ENST00000592839 MYO10Q9HD67 2058 aa16.29■□□□□ 0.2
SF3A2-207ENST00000592839 HOXA9P31269 272 aa16.28■□□□□ 0.2
SF3A2-207ENST00000592839 DDIT3P35638 169 aa16.28■□□□□ 0.2
SF3A2-207ENST00000592839 ZXDAP98168 799 aa16.28■□□□□ 0.2
SF3A2-207ENST00000592839 GTF2BQ00403 316 aa16.28■□□□□ 0.2
SF3A2-207ENST00000592839 POU5F1Q01860 360 aaKnown RBP16.28■□□□□ 0.2
SF3A2-207ENST00000592839 STRN3Q13033 797 aa16.28■□□□□ 0.2
SF3A2-207ENST00000592839 NOLC1Q14978 699 aaKnown RBP eCLIP16.28■□□□□ 0.2
SF3A2-207ENST00000592839 KYAT1Q16773 422 aa16.28■□□□□ 0.2
SF3A2-207ENST00000592839 LNX1Q8TBB1 728 aaPredicted RBP16.28■□□□□ 0.2
SF3A2-207ENST00000592839 MFSD14AQ96MC6 490 aa16.28■□□□□ 0.2
SF3A2-207ENST00000592839 TTPALQ9BTX7 342 aa16.28■□□□□ 0.2
SF3A2-207ENST00000592839 PLEKHA5Q9HAU0 1116 aa16.28■□□□□ 0.2
SF3A2-207ENST00000592839 PARVGQ9HBI0 331 aa16.28■□□□□ 0.2
SF3A2-207ENST00000592839 FBXW11Q9UKB1 542 aa16.28■□□□□ 0.2
SF3A2-207ENST00000592839 CLIC4Q9Y696 253 aa16.28■□□□□ 0.2
SF3A2-207ENST00000592839 CASTOR2A6NHX0 329 aa16.27■□□□□ 0.2
SF3A2-207ENST00000592839 SFI1A8K8P3 1242 aa16.27■□□□□ 0.2
SF3A2-207ENST00000592839 TGM5O43548 720 aa16.27■□□□□ 0.2
SF3A2-207ENST00000592839 STX6O43752 255 aa16.27■□□□□ 0.2
SF3A2-207ENST00000592839 TADA2AO75478 443 aa16.27■□□□□ 0.2
SF3A2-207ENST00000592839 PPP1R37O75864 691 aa16.27■□□□□ 0.2
SF3A2-207ENST00000592839 RPL9P32969 192 aaKnown RBP16.27■□□□□ 0.2
SF3A2-207ENST00000592839 YARSP54577 528 aaKnown RBP16.27■□□□□ 0.2
SF3A2-207ENST00000592839 SIGLEC14Q08ET2 396 aa16.27■□□□□ 0.2
SF3A2-207ENST00000592839 SLC39A14Q15043 492 aa16.27■□□□□ 0.2
SF3A2-207ENST00000592839 KARSQ15046 597 aaKnown RBP16.27■□□□□ 0.2
SF3A2-207ENST00000592839 TMEM132AQ24JP5 1023 aa16.27■□□□□ 0.2
SF3A2-207ENST00000592839 RARS2Q5T160 578 aaKnown RBP16.27■□□□□ 0.2
SF3A2-207ENST00000592839 HAUS6Q7Z4H7 955 aa16.27■□□□□ 0.2
SF3A2-207ENST00000592839 MAP4K3Q8IVH8 894 aa16.27■□□□□ 0.2
SF3A2-207ENST00000592839 PLCD3Q8N3E9 789 aa16.27■□□□□ 0.2
SF3A2-207ENST00000592839 TMEM87AQ8NBN3 555 aa16.27■□□□□ 0.2
SF3A2-207ENST00000592839 ZNF707Q96C28 371 aaPredicted RBP16.27■□□□□ 0.2
SF3A2-207ENST00000592839 ASIC4Q96FT7 647 aa16.27■□□□□ 0.2
SF3A2-207ENST00000592839 RPGRIP1Q96KN7 1286 aa16.27■□□□□ 0.2
SF3A2-207ENST00000592839 ZMAT2Q96NC0 199 aaKnown RBP16.27■□□□□ 0.2
SF3A2-207ENST00000592839 ACAP3Q96P50 834 aa16.27■□□□□ 0.2
SF3A2-207ENST00000592839 STRA6Q9BX79 667 aa16.27■□□□□ 0.2
SF3A2-207ENST00000592839 MAN1C1Q9NR34 630 aa16.27■□□□□ 0.2
SF3A2-207ENST00000592839 GDAQ9Y2T3 454 aa16.27■□□□□ 0.2
SF3A2-207ENST00000592839 BACE2Q9Y5Z0 518 aa16.27■□□□□ 0.2
SF3A2-207ENST00000592839 STYXL1Q9Y6J8 313 aa16.27■□□□□ 0.2
SF3A2-207ENST00000592839 TTC26A0AVF1 554 aa16.26■□□□□ 0.19
SF3A2-207ENST00000592839 FRMD3A2A2Y4 597 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms