RNA–Protein interactions for RNA: ENST00000592822.1

TPM4-216, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 262 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-216ENST00000592822 RFXAPO00287 272 aa10.83□□□□□ -0.68
TPM4-216ENST00000592822 BIN1O00499 593 aa10.83□□□□□ -0.68
TPM4-216ENST00000592822 PDXKO00764 312 aa10.83□□□□□ -0.68
TPM4-216ENST00000592822 CLIC2O15247 247 aa10.83□□□□□ -0.68
TPM4-216ENST00000592822 ADRB2P07550 413 aa10.83□□□□□ -0.68
TPM4-216ENST00000592822 KCNE1P15382 129 aa10.83□□□□□ -0.68
TPM4-216ENST00000592822 LAG3P18627 525 aa10.83□□□□□ -0.68
TPM4-216ENST00000592822 CTNNB1P35222 781 aa10.83□□□□□ -0.68
TPM4-216ENST00000592822 PBX3P40426 434 aa10.83□□□□□ -0.68
TPM4-216ENST00000592822 PRCPP42785 496 aa10.83□□□□□ -0.68
TPM4-216ENST00000592822 DSC1Q08554 894 aa10.83□□□□□ -0.68
TPM4-216ENST00000592822 GRIK3Q13003 919 aa10.83□□□□□ -0.68
TPM4-216ENST00000592822 COBLL1Q53SF7 1204 aa10.83□□□□□ -0.68
TPM4-216ENST00000592822 GLRA4Q5JXX5 417 aa10.83□□□□□ -0.68
TPM4-216ENST00000592822 SPOUT1Q5T280 376 aaKnown RBP10.83□□□□□ -0.68
TPM4-216ENST00000592822 ARMCX5Q6P1M9 558 aa10.83□□□□□ -0.68
TPM4-216ENST00000592822 KCNT2Q6UVM3 1135 aa10.83□□□□□ -0.68
TPM4-216ENST00000592822 C12orf56Q8IXR9 622 aa10.83□□□□□ -0.68
TPM4-216ENST00000592822 COLGALT2Q8IYK4 626 aa10.83□□□□□ -0.68
TPM4-216ENST00000592822 DEFB123Q8N688 67 aa10.83□□□□□ -0.68
TPM4-216ENST00000592822 SAAL1Q96ER3 474 aa10.83□□□□□ -0.68
TPM4-216ENST00000592822 ZMAT2Q96NC0 199 aaKnown RBP10.83□□□□□ -0.68
TPM4-216ENST00000592822 ZNF558Q96NG5 402 aa10.83□□□□□ -0.68
TPM4-216ENST00000592822 PPP1R10Q96QC0 940 aaKnown RBP10.83□□□□□ -0.68
TPM4-216ENST00000592822 RPS6KC1Q96S38 1066 aa10.83□□□□□ -0.68
TPM4-216ENST00000592822 FAM213AQ9BRX8 229 aa10.83□□□□□ -0.68
TPM4-216ENST00000592822 NUP62CLQ9H1M0 184 aa10.83□□□□□ -0.68
TPM4-216ENST00000592822 PLEKHA5Q9HAU0 1116 aa10.83□□□□□ -0.68
TPM4-216ENST00000592822 HSPBP1Q9NZL4 362 aa10.83□□□□□ -0.68
TPM4-216ENST00000592822 CNTN3Q9P232 1028 aa10.83□□□□□ -0.68
TPM4-216ENST00000592822 RWDD3Q9Y3V2 267 aa10.83□□□□□ -0.68
TPM4-216ENST00000592822 LACTBL1A8MY62 500 aa10.82□□□□□ -0.68
TPM4-216ENST00000592822 NT5C1B-RDH14C9J2C7 533 aa10.82□□□□□ -0.68
TPM4-216ENST00000592822 H3BNC9 293 aa10.82□□□□□ -0.68
TPM4-216ENST00000592822 KIAA0391O15091 583 aaKnown RBP10.82□□□□□ -0.68
TPM4-216ENST00000592822 EXTL3O43909 919 aa10.82□□□□□ -0.68
TPM4-216ENST00000592822 ZC3H11AO75152 810 aaKnown RBP eCLIP10.82□□□□□ -0.68
TPM4-216ENST00000592822 KIF20AO95235 890 aa10.82□□□□□ -0.68
TPM4-216ENST00000592822 MBD3O95983 291 aa10.82□□□□□ -0.68
TPM4-216ENST00000592822 RB1P06400 928 aa10.82□□□□□ -0.68
TPM4-216ENST00000592822 THP07101 528 aa10.82□□□□□ -0.68
TPM4-216ENST00000592822 GALTP07902 379 aa10.82□□□□□ -0.68
TPM4-216ENST00000592822 CD44P16070 742 aaKnown RBP10.82□□□□□ -0.68
TPM4-216ENST00000592822 SLC11A1P49279 550 aa10.82□□□□□ -0.68
TPM4-216ENST00000592822 CYP2J2P51589 502 aa10.82□□□□□ -0.68
TPM4-216ENST00000592822 WNT7BP56706 349 aa10.82□□□□□ -0.68
TPM4-216ENST00000592822 BCAR1P56945 870 aa10.82□□□□□ -0.68
TPM4-216ENST00000592822 POU5F1Q01860 360 aaKnown RBP10.82□□□□□ -0.68
TPM4-216ENST00000592822 SPAG1Q07617 926 aa10.82□□□□□ -0.68
TPM4-216ENST00000592822 ZBTB6Q15916 424 aa10.82□□□□□ -0.68
TPM4-216ENST00000592822 ZCWPW2Q504Y3 356 aa10.82□□□□□ -0.68
TPM4-216ENST00000592822 ADSSL1Q8N142 457 aa10.82□□□□□ -0.68
TPM4-216ENST00000592822 SLC39A11Q8N1S5 342 aa10.82□□□□□ -0.68
TPM4-216ENST00000592822 GPD1LQ8N335 351 aa10.82□□□□□ -0.68
TPM4-216ENST00000592822 KLHL23Q8NBE8 558 aa10.82□□□□□ -0.68
TPM4-216ENST00000592822 FBXO22Q8NEZ5 403 aa10.82□□□□□ -0.68
TPM4-216ENST00000592822 GOLGA5Q8TBA6 731 aa10.82□□□□□ -0.68
TPM4-216ENST00000592822 BCL7CQ8WUZ0 217 aaPredicted RBP10.82□□□□□ -0.68
TPM4-216ENST00000592822 FBXL18Q96ME1 805 aa10.82□□□□□ -0.68
TPM4-216ENST00000592822 FAM193BQ96PV7 902 aaPredicted RBP10.82□□□□□ -0.68
TPM4-216ENST00000592822 TMEM175Q9BSA9 504 aa10.82□□□□□ -0.68
TPM4-216ENST00000592822 PLVAPQ9BX97 442 aa10.82□□□□□ -0.68
TPM4-216ENST00000592822 GTPBP4Q9BZE4 634 aaKnown RBP10.82□□□□□ -0.68
TPM4-216ENST00000592822 PRDM12Q9H4Q4 367 aa10.82□□□□□ -0.68
TPM4-216ENST00000592822 RPF1Q9H9Y2 349 aaKnown RBP10.82□□□□□ -0.68
TPM4-216ENST00000592822 AAASQ9NRG9 546 aa10.82□□□□□ -0.68
TPM4-216ENST00000592822 DMAC2Q9NW81 257 aa10.82□□□□□ -0.68
TPM4-216ENST00000592822 CGNQ9P2M7 1197 aaKnown RBP10.82□□□□□ -0.68
TPM4-216ENST00000592822 CACNG4Q9UBN1 327 aa10.82□□□□□ -0.68
TPM4-216ENST00000592822 TRAF3IP3Q9Y228 551 aa10.82□□□□□ -0.68
TPM4-216ENST00000592822 PCDHB12Q9Y5F1 795 aa10.82□□□□□ -0.68
TPM4-216ENST00000592822 PPP1R3GB7ZBB8 358 aa10.81□□□□□ -0.68
TPM4-216ENST00000592822 F8W810 466 aa10.81□□□□□ -0.68
TPM4-216ENST00000592822 NRP1O14786 923 aa10.81□□□□□ -0.68
TPM4-216ENST00000592822 LPXNO60711 386 aa10.81□□□□□ -0.68
TPM4-216ENST00000592822 FGF18O76093 207 aa10.81□□□□□ -0.68
TPM4-216ENST00000592822 LDHAP00338 332 aaKnown RBP10.81□□□□□ -0.68
TPM4-216ENST00000592822 NR3C1P04150 777 aa10.81□□□□□ -0.68
TPM4-216ENST00000592822 ALDH2P05091 517 aa10.81□□□□□ -0.68
TPM4-216ENST00000592822 ALDH7A1P49419 539 aaKnown RBP10.81□□□□□ -0.68
TPM4-216ENST00000592822 PPP2R3AQ06190 1150 aa10.81□□□□□ -0.68
TPM4-216ENST00000592822 SOX4Q06945 474 aaPredicted RBP10.81□□□□□ -0.68
TPM4-216ENST00000592822 TUSC3Q13454 348 aa10.81□□□□□ -0.68
TPM4-216ENST00000592822 GPM6BQ13491 265 aa10.81□□□□□ -0.68
TPM4-216ENST00000592822 CENPPQ6IPU0 288 aa10.81□□□□□ -0.68
TPM4-216ENST00000592822 RBM43Q6ZSC3 357 aaKnown RBP10.81□□□□□ -0.68
TPM4-216ENST00000592822 TMEM173Q86WV6 379 aaPredicted RBP10.81□□□□□ -0.68
TPM4-216ENST00000592822 CBWD2Q8IUF1 395 aa10.81□□□□□ -0.68
TPM4-216ENST00000592822 SLC9A9Q8IVB4 645 aa10.81□□□□□ -0.68
TPM4-216ENST00000592822 BRSK2Q8IWQ3 736 aa10.81□□□□□ -0.68
TPM4-216ENST00000592822 TMEM130Q8N3G9 435 aa10.81□□□□□ -0.68
TPM4-216ENST00000592822 TRIML1Q8N9V2 468 aa10.81□□□□□ -0.68
TPM4-216ENST00000592822 XXYLT1Q8NBI6 393 aa10.81□□□□□ -0.68
TPM4-216ENST00000592822 NOC3LQ8WTT2 800 aaKnown RBP10.81□□□□□ -0.68
TPM4-216ENST00000592822 TMEM174Q8WUU8 243 aa10.81□□□□□ -0.68
TPM4-216ENST00000592822 RABGGTAQ92696 567 aa10.81□□□□□ -0.68
TPM4-216ENST00000592822 P2RX5Q93086 422 aa10.81□□□□□ -0.68
TPM4-216ENST00000592822 C18orf25Q96B23 403 aaPredicted RBP10.81□□□□□ -0.68
TPM4-216ENST00000592822 FAM212AQ96EL1 285 aa10.81□□□□□ -0.68
TPM4-216ENST00000592822 GUCD1Q96NT3 240 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms