RNA–Protein interactions for RNA: ENST00000589823.6

VMP1-210, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-210ENST00000589823 SLC16A3O15427 465 aaKnown RBP14.8□□□□□ -0.04
VMP1-210ENST00000589823 AKAP3O75969 853 aa14.8□□□□□ -0.04
VMP1-210ENST00000589823 CAVIN2O95810 425 aa14.8□□□□□ -0.04
VMP1-210ENST00000589823 KRT13P13646 458 aa14.8□□□□□ -0.04
VMP1-210ENST00000589823 CASP4P49662 377 aa14.8□□□□□ -0.04
VMP1-210ENST00000589823 ZNF165P49910 485 aa14.8□□□□□ -0.04
VMP1-210ENST00000589823 SURF1Q15526 300 aa14.8□□□□□ -0.04
VMP1-210ENST00000589823 SLC10A6Q3KNW5 377 aa14.8□□□□□ -0.04
VMP1-210ENST00000589823 NOMO2Q5JPE7 1267 aa14.8□□□□□ -0.04
VMP1-210ENST00000589823 CLLU1OSQ5K130 101 aa14.8□□□□□ -0.04
VMP1-210ENST00000589823 SPATA1Q5VX52 437 aa14.8□□□□□ -0.04
VMP1-210ENST00000589823 FILIP1Q7Z7B0 1213 aa14.8□□□□□ -0.04
VMP1-210ENST00000589823 ENOX1Q8TC92 643 aaKnown RBP14.8□□□□□ -0.04
VMP1-210ENST00000589823 EEF2KMTQ96G04 330 aa14.8□□□□□ -0.04
VMP1-210ENST00000589823 MKNK1Q9BUB5 465 aa14.8□□□□□ -0.04
VMP1-210ENST00000589823 MRPL9Q9BYD2 267 aaKnown RBP14.8□□□□□ -0.04
VMP1-210ENST00000589823 TSPY26PQ9H489 355 aa14.8□□□□□ -0.04
VMP1-210ENST00000589823 RNF19AQ9NV58 838 aa14.8□□□□□ -0.04
VMP1-210ENST00000589823 CNTN3Q9P232 1028 aa14.8□□□□□ -0.04
VMP1-210ENST00000589823 KANSL3Q9P2N6 904 aa14.8□□□□□ -0.04
VMP1-210ENST00000589823 INSL6Q9Y581 213 aa14.8□□□□□ -0.04
VMP1-210ENST00000589823 TTC26A0AVF1 554 aa14.79□□□□□ -0.04
VMP1-210ENST00000589823 LACTBL1A8MY62 500 aa14.79□□□□□ -0.04
VMP1-210ENST00000589823 TLL1O43897 1013 aa14.79□□□□□ -0.04
VMP1-210ENST00000589823 GNA14O95837 355 aa14.79□□□□□ -0.04
VMP1-210ENST00000589823 GATMP50440 423 aa14.79□□□□□ -0.04
VMP1-210ENST00000589823 ZNF445P59923 1031 aa14.79□□□□□ -0.04
VMP1-210ENST00000589823 MYL5Q02045 173 aa14.79□□□□□ -0.04
VMP1-210ENST00000589823 RNASELQ05823 741 aaKnown RBP14.79□□□□□ -0.04
VMP1-210ENST00000589823 CYP24A1Q07973 514 aa14.79□□□□□ -0.04
VMP1-210ENST00000589823 CCDC40Q4G0X9 1142 aa14.79□□□□□ -0.04
VMP1-210ENST00000589823 PAN2Q504Q3 1202 aaKnown RBP14.79□□□□□ -0.04
VMP1-210ENST00000589823 PRPF38BQ5VTL8 546 aaKnown RBP14.79□□□□□ -0.04
VMP1-210ENST00000589823 ALKAL1Q6UXT8 129 aa14.79□□□□□ -0.04
VMP1-210ENST00000589823 LRRC55Q6ZSA7 311 aa14.79□□□□□ -0.04
VMP1-210ENST00000589823 USP37Q86T82 979 aa14.79□□□□□ -0.04
VMP1-210ENST00000589823 KIF12Q96FN5 646 aa14.79□□□□□ -0.04
VMP1-210ENST00000589823 ZFP42Q96MM3 310 aa14.79□□□□□ -0.04
VMP1-210ENST00000589823 CASD1Q96PB1 797 aa14.79□□□□□ -0.04
VMP1-210ENST00000589823 MED15Q96RN5 788 aa14.79□□□□□ -0.04
VMP1-210ENST00000589823 FNBP1Q96RU3 617 aa14.79□□□□□ -0.04
VMP1-210ENST00000589823 TSPAN18Q96SJ8 248 aa14.79□□□□□ -0.04
VMP1-210ENST00000589823 RAD9AQ99638 391 aa14.79□□□□□ -0.04
VMP1-210ENST00000589823 BPIFA3Q9BQP9 254 aa14.79□□□□□ -0.04
VMP1-210ENST00000589823 ASB7Q9H672 318 aa14.79□□□□□ -0.04
VMP1-210ENST00000589823 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.78□□□□□ -0.04
VMP1-210ENST00000589823 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.78□□□□□ -0.04
VMP1-210ENST00000589823 SMTNL1A8MU46 457 aa14.78□□□□□ -0.04
VMP1-210ENST00000589823 BECN2A8MW95 431 aa14.78□□□□□ -0.04
VMP1-210ENST00000589823 INPPL1O15357 1258 aa14.78□□□□□ -0.04
VMP1-210ENST00000589823 XPOTO43592 962 aaKnown RBP14.78□□□□□ -0.04
VMP1-210ENST00000589823 POMCP01189 267 aa14.78□□□□□ -0.04
VMP1-210ENST00000589823 THP07101 528 aa14.78□□□□□ -0.04
VMP1-210ENST00000589823 ADRB2P07550 413 aa14.78□□□□□ -0.04
VMP1-210ENST00000589823 SCNN1GP51170 649 aa14.78□□□□□ -0.04
VMP1-210ENST00000589823 HTRA4P83105 476 aaPredicted RBP14.78□□□□□ -0.04
VMP1-210ENST00000589823 GRIK3Q13003 919 aa14.78□□□□□ -0.04
VMP1-210ENST00000589823 BTG3Q14201 252 aaPredicted RBP14.78□□□□□ -0.04
VMP1-210ENST00000589823 PSMD6Q15008 389 aa14.78□□□□□ -0.04
VMP1-210ENST00000589823 XKR4Q5GH76 650 aa14.78□□□□□ -0.04
VMP1-210ENST00000589823 INTS8Q75QN2 995 aaKnown RBP14.78□□□□□ -0.04
VMP1-210ENST00000589823 FAM114A1Q8IWE2 563 aa14.78□□□□□ -0.04
VMP1-210ENST00000589823 CMTR2Q8IYT2 770 aaKnown RBP14.78□□□□□ -0.04
VMP1-210ENST00000589823 AOPEPQ8N6M6 819 aa14.78□□□□□ -0.04
VMP1-210ENST00000589823 ZNF689Q96CS4 500 aaPredicted RBP14.78□□□□□ -0.04
VMP1-210ENST00000589823 MFSD14AQ96MC6 490 aa14.78□□□□□ -0.04
VMP1-210ENST00000589823 FAM193BQ96PV7 902 aaPredicted RBP14.78□□□□□ -0.04
VMP1-210ENST00000589823 PRO3102Q9H379 93 aa14.78□□□□□ -0.04
VMP1-210ENST00000589823 THAP9Q9H5L6 903 aa14.78□□□□□ -0.04
VMP1-210ENST00000589823 METTL14Q9HCE5 456 aaKnown RBP14.78□□□□□ -0.04
VMP1-210ENST00000589823 PDE11AQ9HCR9 933 aa14.78□□□□□ -0.04
VMP1-210ENST00000589823 SLC38A7Q9NVC3 462 aa14.78□□□□□ -0.04
VMP1-210ENST00000589823 MAGEC2Q9UBF1 373 aaPredicted RBP14.78□□□□□ -0.04
VMP1-210ENST00000589823 DERAQ9Y315 318 aa14.78□□□□□ -0.04
VMP1-210ENST00000589823 NFE2L3Q9Y4A8 694 aa14.78□□□□□ -0.04
VMP1-210ENST00000589823 SMIM28A0A1B0GU29 152 aa14.77□□□□□ -0.05
VMP1-210ENST00000589823 PTGESO14684 152 aa14.77□□□□□ -0.05
VMP1-210ENST00000589823 MEFVO15553 781 aaPredicted RBP14.77□□□□□ -0.05
VMP1-210ENST00000589823 DLATP10515 647 aaKnown RBP14.77□□□□□ -0.05
VMP1-210ENST00000589823 KCNE1P15382 129 aa14.77□□□□□ -0.05
VMP1-210ENST00000589823 VAMP7P51809 220 aa14.77□□□□□ -0.05
VMP1-210ENST00000589823 AFF1P51825 1210 aaKnown RBP14.77□□□□□ -0.05
VMP1-210ENST00000589823 TMEM132DQ14C87 1099 aa14.77□□□□□ -0.05
VMP1-210ENST00000589823 GLRA4Q5JXX5 417 aa14.77□□□□□ -0.05
VMP1-210ENST00000589823 SPOUT1Q5T280 376 aaKnown RBP14.77□□□□□ -0.05
VMP1-210ENST00000589823 JADE1Q6IE81 842 aa14.77□□□□□ -0.05
VMP1-210ENST00000589823 FRMD5Q7Z6J6 570 aa14.77□□□□□ -0.05
VMP1-210ENST00000589823 NT5DC4Q86YG4 428 aa14.77□□□□□ -0.05
VMP1-210ENST00000589823 CREBRFQ8IUR6 639 aa14.77□□□□□ -0.05
VMP1-210ENST00000589823 LRRC43Q8N309 656 aa14.77□□□□□ -0.05
VMP1-210ENST00000589823 FIBCD1Q8N539 461 aa14.77□□□□□ -0.05
VMP1-210ENST00000589823 TMC2Q8TDI7 906 aa14.77□□□□□ -0.05
VMP1-210ENST00000589823 CACTINQ8WUQ7 758 aaKnown RBP14.77□□□□□ -0.05
VMP1-210ENST00000589823 CCDC127Q96BQ5 260 aa14.77□□□□□ -0.05
VMP1-210ENST00000589823 MIOSQ9NXC5 875 aa14.77□□□□□ -0.05
VMP1-210ENST00000589823 ARMCX3Q9UH62 379 aaPredicted RBP14.77□□□□□ -0.05
VMP1-210ENST00000589823 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.77□□□□□ -0.05
VMP1-210ENST00000589823 A0A1W2PPC1 479 aa14.76□□□□□ -0.05
VMP1-210ENST00000589823 GRXCR1A8MXD5 290 aa14.76□□□□□ -0.05
VMP1-210ENST00000589823 IKBKBO14920 756 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms