RNA–Protein interactions for RNA: ENST00000588516.5

NEDD4L-223, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, human

TSL 5

Gene NEDD4L, Length 1,304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEDD4L-223	ENST00000588516	CYP1B1	Q16678	543 aa		15.06	■□□□□ 0
NEDD4L-223	ENST00000588516	XKR9	Q5GH70	373 aa		15.06	■□□□□ 0
NEDD4L-223	ENST00000588516	JAML	Q86YT9	394 aa		15.06	■□□□□ 0
NEDD4L-223	ENST00000588516	APOBEC3F	Q8IUX4	373 aa	Known RBP	15.06	■□□□□ 0
NEDD4L-223	ENST00000588516	MAP4K3	Q8IVH8	894 aa		15.06	■□□□□ 0
NEDD4L-223	ENST00000588516	SH2D3C	Q8N5H7	860 aa		15.06	■□□□□ 0
NEDD4L-223	ENST00000588516	C12orf50	Q8NA57	414 aa	Predicted RBP	15.06	■□□□□ 0
NEDD4L-223	ENST00000588516	RDH13	Q8NBN7	331 aa		15.06	■□□□□ 0
NEDD4L-223	ENST00000588516	FBXL13	Q8NEE6	735 aa		15.06	■□□□□ 0
NEDD4L-223	ENST00000588516	OLIG1	Q8TAK6	271 aa		15.06	■□□□□ 0
NEDD4L-223	ENST00000588516	SYTL5	Q8TDW5	730 aa	Predicted RBP	15.06	■□□□□ 0
NEDD4L-223	ENST00000588516	GRK7	Q8WTQ7	553 aa		15.06	■□□□□ 0
NEDD4L-223	ENST00000588516	ZNF473	Q8WTR7	871 aa	Known RBP	15.06	■□□□□ 0
NEDD4L-223	ENST00000588516	IFT74	Q96LB3	600 aa		15.06	■□□□□ 0
NEDD4L-223	ENST00000588516	ZNF341	Q9BYN7	854 aa		15.06	■□□□□ 0
NEDD4L-223	ENST00000588516	ROPN1B	Q9BZX4	212 aa	Predicted RBP	15.06	■□□□□ 0
NEDD4L-223	ENST00000588516	ROPN1	Q9HAT0	212 aa	Predicted RBP	15.06	■□□□□ 0
NEDD4L-223	ENST00000588516	WRAP73	Q9P2S5	460 aa	Predicted RBP	15.06	■□□□□ 0
NEDD4L-223	ENST00000588516	TBX20	Q9UMR3	447 aa		15.06	■□□□□ 0
NEDD4L-223	ENST00000588516	PCDHA3	Q9Y5H8	950 aa		15.06	■□□□□ 0
NEDD4L-223	ENST00000588516		E7EVH7	732 aa		15.05	■□□□□ -0
NEDD4L-223	ENST00000588516	DDX39A	O00148	427 aa	Known RBP	15.05	■□□□□ -0
NEDD4L-223	ENST00000588516	TRIM66	O15016	1216 aa		15.05	■□□□□ -0
NEDD4L-223	ENST00000588516	CTNND1	O60716	968 aa	Known RBP	15.05	■□□□□ -0
NEDD4L-223	ENST00000588516	LRRN2	O75325	713 aa		15.05	■□□□□ -0
NEDD4L-223	ENST00000588516	ALAS1	P13196	640 aa		15.05	■□□□□ -0
NEDD4L-223	ENST00000588516	CETN2	P41208	172 aa		15.05	■□□□□ -0
NEDD4L-223	ENST00000588516	MNX1	P50219	401 aa	Predicted RBP	15.05	■□□□□ -0
NEDD4L-223	ENST00000588516	OAZ1	P54368	228 aa		15.05	■□□□□ -0
NEDD4L-223	ENST00000588516	PEX3	P56589	373 aa		15.05	■□□□□ -0
NEDD4L-223	ENST00000588516	GCNT1	Q02742	428 aa		15.05	■□□□□ -0
NEDD4L-223	ENST00000588516	PPP3CA	Q08209	521 aa		15.05	■□□□□ -0
NEDD4L-223	ENST00000588516	CALCOCO2	Q13137	446 aa		15.05	■□□□□ -0
NEDD4L-223	ENST00000588516	UAP1	Q16222	522 aa	Predicted RBP	15.05	■□□□□ -0
NEDD4L-223	ENST00000588516	SNRNP35	Q16560	246 aa	Known RBP	15.05	■□□□□ -0
NEDD4L-223	ENST00000588516	BRDT	Q58F21	947 aa	Predicted RBP	15.05	■□□□□ -0
NEDD4L-223	ENST00000588516	FAM102B	Q5T8I3	360 aa		15.05	■□□□□ -0
NEDD4L-223	ENST00000588516	NAA35	Q5VZE5	725 aa		15.05	■□□□□ -0
NEDD4L-223	ENST00000588516	ACAD10	Q6JQN1	1059 aa		15.05	■□□□□ -0
NEDD4L-223	ENST00000588516	TRIM72	Q6ZMU5	477 aa		15.05	■□□□□ -0
NEDD4L-223	ENST00000588516	TRMT10C	Q7L0Y3	403 aa	Known RBP	15.05	■□□□□ -0
NEDD4L-223	ENST00000588516	TAOK1	Q7L7X3	1001 aa		15.05	■□□□□ -0
NEDD4L-223	ENST00000588516	KSR1	Q8IVT5	923 aa		15.05	■□□□□ -0
NEDD4L-223	ENST00000588516	MICALL1	Q8N3F8	863 aa		15.05	■□□□□ -0
NEDD4L-223	ENST00000588516	BBOF1	Q8ND07	529 aa		15.05	■□□□□ -0
NEDD4L-223	ENST00000588516	MYCBPAP	Q8TBZ2	947 aa		15.05	■□□□□ -0
NEDD4L-223	ENST00000588516	SLCO2A1	Q92959	643 aa		15.05	■□□□□ -0
NEDD4L-223	ENST00000588516	ARHGEF26	Q96DR7	871 aa		15.05	■□□□□ -0
NEDD4L-223	ENST00000588516	CLMN	Q96JQ2	1002 aa		15.05	■□□□□ -0
NEDD4L-223	ENST00000588516	MFSD14A	Q96MC6	490 aa		15.05	■□□□□ -0
NEDD4L-223	ENST00000588516	AGBL1	Q96MI9	1066 aa		15.05	■□□□□ -0
NEDD4L-223	ENST00000588516	MOV10L1	Q9BXT6	1211 aa	Known RBP	15.05	■□□□□ -0
NEDD4L-223	ENST00000588516	TXLNGY	Q9BZA5	131 aa		15.05	■□□□□ -0
NEDD4L-223	ENST00000588516	TMEM117	Q9H0C3	514 aa		15.05	■□□□□ -0
NEDD4L-223	ENST00000588516	DPH5	Q9H2P9	285 aa		15.05	■□□□□ -0
NEDD4L-223	ENST00000588516	GOLPH3	Q9H4A6	298 aa		15.05	■□□□□ -0
NEDD4L-223	ENST00000588516	PCIF1	Q9H4Z3	704 aa		15.05	■□□□□ -0
NEDD4L-223	ENST00000588516	AS3MT	Q9HBK9	375 aa		15.05	■□□□□ -0
NEDD4L-223	ENST00000588516	POLD4	Q9HCU8	107 aa		15.05	■□□□□ -0
NEDD4L-223	ENST00000588516	KMT5A	Q9NQR1	393 aa		15.05	■□□□□ -0
NEDD4L-223	ENST00000588516	AVEN	Q9NQS1	362 aa	Predicted RBP	15.05	■□□□□ -0
NEDD4L-223	ENST00000588516	BCCIP	Q9P287	314 aa	Known RBP eCLIP	15.05	■□□□□ -0	5e-9	■■■■□ 23.6
NEDD4L-223	ENST00000588516	PCDHA10	Q9Y5I2	948 aa		15.05	■□□□□ -0
NEDD4L-223	ENST00000588516	MYO1F	O00160	1098 aa		15.04	■□□□□ -0
NEDD4L-223	ENST00000588516	DGAT1	O75907	488 aa		15.04	■□□□□ -0
NEDD4L-223	ENST00000588516	AGT	P01019	485 aa		15.04	■□□□□ -0
NEDD4L-223	ENST00000588516	PSAP	P07602	524 aa		15.04	■□□□□ -0
NEDD4L-223	ENST00000588516	HPD	P32754	393 aa	Predicted RBP	15.04	■□□□□ -0
NEDD4L-223	ENST00000588516	CAP1	Q01518	475 aa		15.04	■□□□□ -0
NEDD4L-223	ENST00000588516	GUCY1A3	Q02108	690 aa		15.04	■□□□□ -0
NEDD4L-223	ENST00000588516	PGM5	Q15124	567 aa		15.04	■□□□□ -0
NEDD4L-223	ENST00000588516	ZYX	Q15942	572 aa	Known RBP	15.04	■□□□□ -0
NEDD4L-223	ENST00000588516	WDR44	Q5JSH3	913 aa		15.04	■□□□□ -0
NEDD4L-223	ENST00000588516	ARHGEF16	Q5VV41	709 aa		15.04	■□□□□ -0
NEDD4L-223	ENST00000588516	RNF207	Q6ZRF8	634 aa		15.04	■□□□□ -0
NEDD4L-223	ENST00000588516	DDX42	Q86XP3	938 aa	Known RBP eCLIP	15.04	■□□□□ -0
NEDD4L-223	ENST00000588516	PPM1K	Q8N3J5	372 aa		15.04	■□□□□ -0
NEDD4L-223	ENST00000588516	ZNF564	Q8TBZ8	553 aa	Predicted RBP	15.04	■□□□□ -0
NEDD4L-223	ENST00000588516	EPS8L1	Q8TE68	723 aa		15.04	■□□□□ -0
NEDD4L-223	ENST00000588516	KCNN1	Q92952	543 aa		15.04	■□□□□ -0
NEDD4L-223	ENST00000588516	ZBTB9	Q96C00	473 aa		15.04	■□□□□ -0
NEDD4L-223	ENST00000588516	ZBED3	Q96IU2	234 aa	Predicted RBP	15.04	■□□□□ -0
NEDD4L-223	ENST00000588516	FBXL18	Q96ME1	805 aa		15.04	■□□□□ -0
NEDD4L-223	ENST00000588516	CBWD1	Q9BRT8	395 aa		15.04	■□□□□ -0
NEDD4L-223	ENST00000588516	NOCT	Q9UK39	431 aa	Known RBP	15.04	■□□□□ -0
NEDD4L-223	ENST00000588516	BRCA2	P51587	3418 aa		15.04	■□□□□ -0
NEDD4L-223	ENST00000588516	SLC16A4	O15374	487 aa		15.03	■□□□□ -0
NEDD4L-223	ENST00000588516	TRAPPC3	O43617	180 aa		15.03	■□□□□ -0
NEDD4L-223	ENST00000588516	FSBP	O95073	299 aa		15.03	■□□□□ -0
NEDD4L-223	ENST00000588516	RARG	P13631	454 aa		15.03	■□□□□ -0
NEDD4L-223	ENST00000588516	COMT	P21964	271 aa		15.03	■□□□□ -0
NEDD4L-223	ENST00000588516	PEX5	P50542	639 aa		15.03	■□□□□ -0
NEDD4L-223	ENST00000588516	MESD	Q14696	234 aa		15.03	■□□□□ -0
NEDD4L-223	ENST00000588516	LIN9	Q5TKA1	542 aa		15.03	■□□□□ -0
NEDD4L-223	ENST00000588516	DCAF15	Q66K64	600 aa		15.03	■□□□□ -0
NEDD4L-223	ENST00000588516	CCDC137	Q6PK04	289 aa	Known RBP	15.03	■□□□□ -0
NEDD4L-223	ENST00000588516	CCDC121	Q6ZUS5	278 aa		15.03	■□□□□ -0
NEDD4L-223	ENST00000588516	SLC13A5	Q86YT5	568 aa	Predicted RBP	15.03	■□□□□ -0
NEDD4L-223	ENST00000588516	ARHGEF19	Q8IW93	802 aa		15.03	■□□□□ -0
NEDD4L-223	ENST00000588516	TMEM161B	Q8NDZ6	487 aa		15.03	■□□□□ -0

Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms