RNA–Protein interactions for RNA: ENST00000588483.1

TPM4-209, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-209ENST00000588483 PAPLNO95428 1278 aa11.49□□□□□ -0.57
TPM4-209ENST00000588483 KCNE1P15382 129 aa11.49□□□□□ -0.57
TPM4-209ENST00000588483 GLUD2P49448 558 aa11.49□□□□□ -0.57
TPM4-209ENST00000588483 RBM10P98175 930 aaKnown RBP11.49□□□□□ -0.57
TPM4-209ENST00000588483 E2F4Q16254 413 aa11.49□□□□□ -0.57
TPM4-209ENST00000588483 KYAT1Q16773 422 aa11.49□□□□□ -0.57
TPM4-209ENST00000588483 SV2BQ7L1I2 683 aa11.49□□□□□ -0.57
TPM4-209ENST00000588483 MYCT1Q8N699 235 aa11.49□□□□□ -0.57
TPM4-209ENST00000588483 SLC22A17Q8WUG5 538 aa11.49□□□□□ -0.57
TPM4-209ENST00000588483 AUTS2Q8WXX7 1259 aa11.49□□□□□ -0.57
TPM4-209ENST00000588483 DDX12PQ92771 950 aa11.49□□□□□ -0.57
TPM4-209ENST00000588483 HVCN1Q96D96 273 aa11.49□□□□□ -0.57
TPM4-209ENST00000588483 UROC1Q96N76 676 aa11.49□□□□□ -0.57
TPM4-209ENST00000588483 PAAF1Q9BRP4 392 aa11.49□□□□□ -0.57
TPM4-209ENST00000588483 STRA6Q9BX79 667 aa11.49□□□□□ -0.57
TPM4-209ENST00000588483 EMILIN2Q9BXX0 1053 aa11.49□□□□□ -0.57
TPM4-209ENST00000588483 GPR62Q9BZJ7 368 aa11.49□□□□□ -0.57
TPM4-209ENST00000588483 CUEDC2Q9H467 287 aa11.49□□□□□ -0.57
TPM4-209ENST00000588483 OLFML3Q9NRN5 406 aa11.49□□□□□ -0.57
TPM4-209ENST00000588483 MRPL17Q9NRX2 175 aaKnown RBP11.49□□□□□ -0.57
TPM4-209ENST00000588483 DZANK1Q9NVP4 752 aa11.49□□□□□ -0.57
TPM4-209ENST00000588483 FNIP2Q9P278 1114 aa11.49□□□□□ -0.57
TPM4-209ENST00000588483 TBX20Q9UMR3 447 aa11.49□□□□□ -0.57
TPM4-209ENST00000588483 GDAQ9Y2T3 454 aa11.49□□□□□ -0.57
TPM4-209ENST00000588483 VWA8A3KMH1 1905 aa11.48□□□□□ -0.57
TPM4-209ENST00000588483 SMIM28A0A1B0GU29 152 aa11.48□□□□□ -0.57
TPM4-209ENST00000588483 CLDN3O15551 220 aa11.48□□□□□ -0.57
TPM4-209ENST00000588483 KIF4AO95239 1232 aa11.48□□□□□ -0.57
TPM4-209ENST00000588483 KRT18P05783 430 aaKnown RBP11.48□□□□□ -0.57
TPM4-209ENST00000588483 URODP06132 367 aa11.48□□□□□ -0.57
TPM4-209ENST00000588483 ADRB2P07550 413 aa11.48□□□□□ -0.57
TPM4-209ENST00000588483 CNPP09543 421 aaKnown RBP11.48□□□□□ -0.57
TPM4-209ENST00000588483 GAP43P17677 238 aa11.48□□□□□ -0.57
TPM4-209ENST00000588483 CLCN4P51793 760 aa11.48□□□□□ -0.57
TPM4-209ENST00000588483 YARSP54577 528 aaKnown RBP11.48□□□□□ -0.57
TPM4-209ENST00000588483 CREMQ03060 361 aa11.48□□□□□ -0.57
TPM4-209ENST00000588483 ITIH3Q06033 890 aa11.48□□□□□ -0.57
TPM4-209ENST00000588483 ELAVL2Q12926 359 aaKnown RBP11.48□□□□□ -0.57
TPM4-209ENST00000588483 DHX8Q14562 1220 aaKnown RBP11.48□□□□□ -0.57
TPM4-209ENST00000588483 CBX2Q14781 532 aaPredicted RBP11.48□□□□□ -0.57
TPM4-209ENST00000588483 CLUL1Q15846 466 aa11.48□□□□□ -0.57
TPM4-209ENST00000588483 USP41Q3LFD5 358 aa11.48□□□□□ -0.57
TPM4-209ENST00000588483 TPRNQ4KMQ1 711 aa11.48□□□□□ -0.57
TPM4-209ENST00000588483 CNNM4Q6P4Q7 775 aa11.48□□□□□ -0.57
TPM4-209ENST00000588483 TAS1R1Q7RTX1 841 aa11.48□□□□□ -0.57
TPM4-209ENST00000588483 ZNF720Q7Z2F6 126 aa11.48□□□□□ -0.57
TPM4-209ENST00000588483 GJD3Q8N144 294 aa11.48□□□□□ -0.57
TPM4-209ENST00000588483 ZBTB45Q96K62 511 aaPredicted RBP11.48□□□□□ -0.57
TPM4-209ENST00000588483 ACAP3Q96P50 834 aa11.48□□□□□ -0.57
TPM4-209ENST00000588483 KLHL5Q96PQ7 755 aa11.48□□□□□ -0.57
TPM4-209ENST00000588483 POP1Q99575 1024 aaKnown RBP11.48□□□□□ -0.57
TPM4-209ENST00000588483 RHOBTB2Q9BYZ6 727 aa11.48□□□□□ -0.57
TPM4-209ENST00000588483 HAPLN2Q9GZV7 340 aa11.48□□□□□ -0.57
TPM4-209ENST00000588483 TNMDQ9H2S6 317 aa11.48□□□□□ -0.57
TPM4-209ENST00000588483 PLEKHA5Q9HAU0 1116 aa11.48□□□□□ -0.57
TPM4-209ENST00000588483 CD320Q9NPF0 282 aa11.48□□□□□ -0.57
TPM4-209ENST00000588483 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.48□□□□□ -0.57
TPM4-209ENST00000588483 SLC38A7Q9NVC3 462 aa11.48□□□□□ -0.57
TPM4-209ENST00000588483 KBTBD4Q9NVX7 518 aa11.48□□□□□ -0.57
TPM4-209ENST00000588483 TFIP11Q9UBB9 837 aaKnown RBP11.48□□□□□ -0.57
TPM4-209ENST00000588483 CFAP45Q9UL16 551 aa11.48□□□□□ -0.57
TPM4-209ENST00000588483 USP15Q9Y4E8 981 aaPredicted RBP11.48□□□□□ -0.57
TPM4-209ENST00000588483 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.48□□□□□ -0.57
TPM4-209ENST00000588483 STYXL1Q9Y6J8 313 aa11.48□□□□□ -0.57
TPM4-209ENST00000588483 SF3B1O75533 1304 aaKnown RBP eCLIP11.48□□□□□ -0.572e-7■■■■□ 26.7
TPM4-209ENST00000588483 MTCL1Q9Y4B5 1905 aaKnown RBP11.48□□□□□ -0.57
TPM4-209ENST00000588483 DENND4AQ7Z401 1863 aa11.47□□□□□ -0.57
TPM4-209ENST00000588483 A0A0B4J269 797 aa11.47□□□□□ -0.57
TPM4-209ENST00000588483 CASTOR2A6NHX0 329 aa11.47□□□□□ -0.57
TPM4-209ENST00000588483 LOC730098B7Z3J9 87 aa11.47□□□□□ -0.57
TPM4-209ENST00000588483 HNRNPDLO14979 420 aaKnown RBP11.47□□□□□ -0.57
TPM4-209ENST00000588483 ADH1AP07327 375 aa11.47□□□□□ -0.57
TPM4-209ENST00000588483 CLTAP09496 248 aa11.47□□□□□ -0.57
TPM4-209ENST00000588483 NMT1P30419 496 aaKnown RBP11.47□□□□□ -0.57
TPM4-209ENST00000588483 STAT6P42226 847 aa11.47□□□□□ -0.57
TPM4-209ENST00000588483 POU5F1Q01860 360 aaKnown RBP11.47□□□□□ -0.57
TPM4-209ENST00000588483 SOX4Q06945 474 aaPredicted RBP11.47□□□□□ -0.57
TPM4-209ENST00000588483 UPP1Q16831 310 aa11.47□□□□□ -0.57
TPM4-209ENST00000588483 SLC10A6Q3KNW5 377 aa11.47□□□□□ -0.57
TPM4-209ENST00000588483 SLC39A4Q6P5W5 647 aa11.47□□□□□ -0.57
TPM4-209ENST00000588483 SHC4Q6S5L8 630 aa11.47□□□□□ -0.57
TPM4-209ENST00000588483 CD300LGQ6UXG3 332 aa11.47□□□□□ -0.57
TPM4-209ENST00000588483 HDAC7Q8WUI4 952 aa11.47□□□□□ -0.57
TPM4-209ENST00000588483 DDX27Q96GQ7 796 aaKnown RBP11.47□□□□□ -0.57
TPM4-209ENST00000588483 ZMAT2Q96NC0 199 aaKnown RBP11.47□□□□□ -0.57
TPM4-209ENST00000588483 TSPAN18Q96SJ8 248 aa11.47□□□□□ -0.57
TPM4-209ENST00000588483 TCHPQ9BT92 498 aa11.47□□□□□ -0.57
TPM4-209ENST00000588483 PHF7Q9BWX1 381 aaPredicted RBP11.47□□□□□ -0.57
TPM4-209ENST00000588483 ADAM7Q9H2U9 754 aa11.47□□□□□ -0.57
TPM4-209ENST00000588483 MAGEF1Q9HAY2 307 aa11.47□□□□□ -0.57
TPM4-209ENST00000588483 ANKFY1Q9P2R3 1169 aa11.47□□□□□ -0.57
TPM4-209ENST00000588483 CACNG4Q9UBN1 327 aa11.47□□□□□ -0.57
TPM4-209ENST00000588483 RCOR1Q9UKL0 485 aa11.47□□□□□ -0.57
TPM4-209ENST00000588483 ZDHHC9Q9Y397 364 aa11.47□□□□□ -0.57
TPM4-209ENST00000588483 PLXNA3P51805 1871 aa11.46□□□□□ -0.57
TPM4-209ENST00000588483 TTC26A0AVF1 554 aa11.46□□□□□ -0.57
TPM4-209ENST00000588483 OGTO15294 1046 aa11.46□□□□□ -0.57
TPM4-209ENST00000588483 TEX28O15482 410 aa11.46□□□□□ -0.57
TPM4-209ENST00000588483 TADA2AO75478 443 aa11.46□□□□□ -0.57
TPM4-209ENST00000588483 EPCAMP16422 314 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms