RNA–Protein interactions for RNA: ENST00000588477.5

IFT20-216, Transcript of intraflagellar transport 20, humanhuman

TSL 5 BASIC

Gene IFT20, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-216ENST00000588477 SLC7A14Q8TBB6 771 aa16.95■□□□□ 0.3
IFT20-216ENST00000588477 EPC1Q9H2F5 836 aa16.95■□□□□ 0.3
IFT20-216ENST00000588477 DNMT3BQ9UBC3 853 aaKnown RBP16.95■□□□□ 0.3
IFT20-216ENST00000588477 CDV3Q9UKY7 258 aaKnown RBP16.95■□□□□ 0.3
IFT20-216ENST00000588477 USP18Q9UMW8 372 aa16.95■□□□□ 0.3
IFT20-216ENST00000588477 TPRP12270 2363 aaKnown RBP16.95■□□□□ 0.3
IFT20-216ENST00000588477 ZMYM2Q9UBW7 1377 aa16.94■□□□□ 0.3
IFT20-216ENST00000588477 A0A1B0GUA9 196 aa16.94■□□□□ 0.3
IFT20-216ENST00000588477 DCDC2BA2VCK2 349 aa16.94■□□□□ 0.3
IFT20-216ENST00000588477 NCAM2O15394 837 aa16.94■□□□□ 0.3
IFT20-216ENST00000588477 SLITRK3O94933 977 aa16.94■□□□□ 0.3
IFT20-216ENST00000588477 GCFC2P16383 781 aaKnown RBP16.94■□□□□ 0.3
IFT20-216ENST00000588477 GLRA2P23416 452 aa16.94■□□□□ 0.3
IFT20-216ENST00000588477 ARL2P36404 184 aa16.94■□□□□ 0.3
IFT20-216ENST00000588477 SPIRE1Q08AE8 756 aa16.94■□□□□ 0.3
IFT20-216ENST00000588477 POTEDQ86YR6 584 aa16.94■□□□□ 0.3
IFT20-216ENST00000588477 NPAS3Q8IXF0 933 aa16.94■□□□□ 0.3
IFT20-216ENST00000588477 ING5Q8WYH8 240 aa16.94■□□□□ 0.3
IFT20-216ENST00000588477 NELL1Q92832 810 aa16.94■□□□□ 0.3
IFT20-216ENST00000588477 CLDN23Q96B33 292 aa16.94■□□□□ 0.3
IFT20-216ENST00000588477 NELL2Q99435 816 aa16.94■□□□□ 0.3
IFT20-216ENST00000588477 LARP6Q9BRS8 491 aaKnown RBP16.94■□□□□ 0.3
IFT20-216ENST00000588477 DGAT1O75907 488 aa16.93■□□□□ 0.3
IFT20-216ENST00000588477 BAG4O95429 457 aaKnown RBP16.93■□□□□ 0.3
IFT20-216ENST00000588477 OR1D2P34982 312 aa16.93■□□□□ 0.3
IFT20-216ENST00000588477 LMNB2Q03252 620 aa16.93■□□□□ 0.3
IFT20-216ENST00000588477 STK3Q13188 491 aa16.93■□□□□ 0.3
IFT20-216ENST00000588477 UVSSAQ2YD98 709 aa16.93■□□□□ 0.3
IFT20-216ENST00000588477 PABPC1LQ4VXU2 614 aaKnown RBP16.93■□□□□ 0.3
IFT20-216ENST00000588477 FAM177A1Q8N128 213 aaPredicted RBP16.93■□□□□ 0.3
IFT20-216ENST00000588477 MCRS1Q96EZ8 462 aa16.93■□□□□ 0.3
IFT20-216ENST00000588477 EIF2AK1Q9BQI3 630 aaKnown RBP16.93■□□□□ 0.3
IFT20-216ENST00000588477 RTKNQ9BST9 563 aa16.93■□□□□ 0.3
IFT20-216ENST00000588477 NFKBIZQ9BYH8 718 aa16.93■□□□□ 0.3
IFT20-216ENST00000588477 PLA2G2FQ9BZM2 168 aa16.93■□□□□ 0.3
IFT20-216ENST00000588477 HEBP1Q9NRV9 189 aa16.93■□□□□ 0.3
IFT20-216ENST00000588477 EPG5Q9HCE0 2579 aa16.93■□□□□ 0.3
IFT20-216ENST00000588477 PTGESO14684 152 aa16.92■□□□□ 0.3
IFT20-216ENST00000588477 TBC1D4O60343 1298 aa16.92■□□□□ 0.3
IFT20-216ENST00000588477 THP07101 528 aa16.92■□□□□ 0.3
IFT20-216ENST00000588477 TGM1P22735 817 aa16.92■□□□□ 0.3
IFT20-216ENST00000588477 RPS9P46781 194 aaKnown RBP16.92■□□□□ 0.3
IFT20-216ENST00000588477 FZD5Q13467 585 aa16.92■□□□□ 0.3
IFT20-216ENST00000588477 PDXDC1Q6P996 788 aa16.92■□□□□ 0.3
IFT20-216ENST00000588477 ZNF852Q6ZMS4 543 aa16.92■□□□□ 0.3
IFT20-216ENST00000588477 PIK3AP1Q6ZUJ8 805 aa16.92■□□□□ 0.3
IFT20-216ENST00000588477 RUFY3Q7L099 469 aa16.92■□□□□ 0.3
IFT20-216ENST00000588477 CXCL16Q9H2A7 254 aa16.92■□□□□ 0.3
IFT20-216ENST00000588477 SNTG2Q9NY99 539 aa16.92■□□□□ 0.3
IFT20-216ENST00000588477 KCNH3Q9ULD8 1083 aa16.92■□□□□ 0.3
IFT20-216ENST00000588477 MRPS23Q9Y3D9 190 aaKnown RBP16.92■□□□□ 0.3
IFT20-216ENST00000588477 COL4A2P08572 1712 aa16.92■□□□□ 0.3
IFT20-216ENST00000588477 LRRIQ4A6NIV6 560 aa16.91■□□□□ 0.3
IFT20-216ENST00000588477 ECI2O75521 394 aa16.91■□□□□ 0.3
IFT20-216ENST00000588477 ADCY1Q08828 1119 aa16.91■□□□□ 0.3
IFT20-216ENST00000588477 ELAVL2Q12926 359 aaKnown RBP16.91■□□□□ 0.3
IFT20-216ENST00000588477 MTAPQ13126 283 aa16.91■□□□□ 0.3
IFT20-216ENST00000588477 RAB33AQ14088 237 aa16.91■□□□□ 0.3
IFT20-216ENST00000588477 CPLX2Q6PUV4 134 aaKnown RBP16.91■□□□□ 0.3
IFT20-216ENST00000588477 SLFN12Q8IYM2 578 aa16.91■□□□□ 0.3
IFT20-216ENST00000588477 OXER1Q8TDS5 423 aa16.91■□□□□ 0.3
IFT20-216ENST00000588477 ZNF274Q96GC6 653 aaPredicted RBP16.91■□□□□ 0.3
IFT20-216ENST00000588477 CCDC43Q96MW1 224 aaKnown RBP16.91■□□□□ 0.3
IFT20-216ENST00000588477 NAP1L4Q99733 375 aaKnown RBP16.91■□□□□ 0.3
IFT20-216ENST00000588477 POLR3FQ9H1D9 316 aaPredicted RBP16.91■□□□□ 0.3
IFT20-216ENST00000588477 PARD6AQ9NPB6 346 aa16.91■□□□□ 0.3
IFT20-216ENST00000588477 PRMT8Q9NR22 394 aaPredicted RBP16.91■□□□□ 0.3
IFT20-216ENST00000588477 ANKEF1Q9NU02 776 aa16.91■□□□□ 0.3
IFT20-216ENST00000588477 GMEB2Q9UKD1 530 aa16.91■□□□□ 0.3
IFT20-216ENST00000588477 MRPS17Q9Y2R5 130 aaKnown RBP16.91■□□□□ 0.3
IFT20-216ENST00000588477 A0A087WWV3 80 aa16.9■□□□□ 0.3
IFT20-216ENST00000588477 SHISA7A6NL88 538 aa16.9■□□□□ 0.3
IFT20-216ENST00000588477 POU2F2P09086 479 aa16.9■□□□□ 0.3
IFT20-216ENST00000588477 NAB2Q15742 525 aa16.9■□□□□ 0.3
IFT20-216ENST00000588477 TANGO2Q6ICL3 276 aa16.9■□□□□ 0.3
IFT20-216ENST00000588477 POTEHQ6S545 545 aa16.9■□□□□ 0.3
IFT20-216ENST00000588477 MAEAQ7L5Y9 396 aa16.9■□□□□ 0.3
IFT20-216ENST00000588477 PIGOQ8TEQ8 1089 aa16.9■□□□□ 0.3
IFT20-216ENST00000588477 HSD17B14Q9BPX1 270 aa16.9■□□□□ 0.3
IFT20-216ENST00000588477 FAM126AQ9BYI3 521 aaPredicted RBP16.9■□□□□ 0.3
IFT20-216ENST00000588477 GJB4Q9NTQ9 266 aa16.9■□□□□ 0.3
IFT20-216ENST00000588477 PRMT7Q9NVM4 692 aaPredicted RBP16.9■□□□□ 0.3
IFT20-216ENST00000588477 NDRG2Q9UN36 371 aaKnown RBP16.9■□□□□ 0.3
IFT20-216ENST00000588477 CDY1Q9Y6F8 540 aa16.9■□□□□ 0.3
IFT20-216ENST00000588477 CITO14578 2027 aa16.9■□□□□ 0.3
IFT20-216ENST00000588477 ACACBO00763 2458 aa16.9■□□□□ 0.3
IFT20-216ENST00000588477 TTLL13PA6NNM8 815 aa16.89■□□□□ 0.29
IFT20-216ENST00000588477 USO1O60763 962 aaKnown RBP16.89■□□□□ 0.29
IFT20-216ENST00000588477 RECQL4O94761 1208 aa16.89■□□□□ 0.29
IFT20-216ENST00000588477 LYPLA2O95372 231 aa16.89■□□□□ 0.29
IFT20-216ENST00000588477 RHOP08100 348 aa16.89■□□□□ 0.29
IFT20-216ENST00000588477 RARRES1P49788 294 aa16.89■□□□□ 0.29
IFT20-216ENST00000588477 SPEM2Q0P670 501 aa16.89■□□□□ 0.29
IFT20-216ENST00000588477 LPAL2Q16609 132 aa16.89■□□□□ 0.29
IFT20-216ENST00000588477 SLC5A9Q2M3M2 681 aa16.89■□□□□ 0.29
IFT20-216ENST00000588477 EARS2Q5JPH6 523 aaKnown RBP16.89■□□□□ 0.29
IFT20-216ENST00000588477 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.89■□□□□ 0.29
IFT20-216ENST00000588477 PRIMPOLQ96LW4 560 aa16.89■□□□□ 0.29
IFT20-216ENST00000588477 ZSWIM6Q9HCJ5 1215 aa16.89■□□□□ 0.29
IFT20-216ENST00000588477 GPRC5CQ9NQ84 441 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms