RNA–Protein interactions for RNA: ENST00000587457.1

PPP6R1-204, Transcript of protein phosphatase 6 regulatory subunit 1, humanhuman

TSL 2

Gene PPP6R1, Length 2,389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP6R1-204ENST00000587457 SLC9A1P19634 815 aa17.04■□□□□ 0.32
PPP6R1-204ENST00000587457 NLGN2Q8NFZ4 835 aa17.04■□□□□ 0.32
PPP6R1-204ENST00000587457 GRHL1Q9NZI5 618 aa17.04■□□□□ 0.32
PPP6R1-204ENST00000587457 FZD1Q9UP38 647 aa17.04■□□□□ 0.32
PPP6R1-204ENST00000587457 WDR46O15213 610 aaKnown RBP17.03■□□□□ 0.32
PPP6R1-204ENST00000587457 DDX3YO15523 660 aaKnown RBP17.03■□□□□ 0.32
PPP6R1-204ENST00000587457 DRG2P55039 364 aaKnown RBP17.03■□□□□ 0.32
PPP6R1-204ENST00000587457 POLE2P56282 527 aa17.03■□□□□ 0.32
PPP6R1-204ENST00000587457 KCNH2Q12809 1159 aa17.03■□□□□ 0.32
PPP6R1-204ENST00000587457 ZNF211Q13398 564 aaPredicted RBP17.03■□□□□ 0.32
PPP6R1-204ENST00000587457 MTMR2Q13614 643 aa17.03■□□□□ 0.32
PPP6R1-204ENST00000587457 CTTNQ14247 550 aaKnown RBP17.03■□□□□ 0.32
PPP6R1-204ENST00000587457 CMPK2Q5EBM0 449 aa17.03■□□□□ 0.32
PPP6R1-204ENST00000587457 OTOP1Q7RTM1 612 aa17.03■□□□□ 0.32
PPP6R1-204ENST00000587457 LONP2Q86WA8 852 aa17.03■□□□□ 0.32
PPP6R1-204ENST00000587457 ECHDC2Q86YB7 292 aa17.03■□□□□ 0.32
PPP6R1-204ENST00000587457 SYT2Q8N9I0 419 aaPredicted RBP17.03■□□□□ 0.32
PPP6R1-204ENST00000587457 CKAP2Q8WWK9 683 aa17.03■□□□□ 0.32
PPP6R1-204ENST00000587457 CEP63Q96MT8 703 aa17.03■□□□□ 0.32
PPP6R1-204ENST00000587457 DDX23Q9BUQ8 820 aaKnown RBP17.03■□□□□ 0.32
PPP6R1-204ENST00000587457 KIAA1683Q9H0B3 1180 aa17.03■□□□□ 0.32
PPP6R1-204ENST00000587457 KCNK9Q9NPC2 374 aa17.03■□□□□ 0.32
PPP6R1-204ENST00000587457 PPP1R9AQ9ULJ8 1098 aa17.03■□□□□ 0.32
PPP6R1-204ENST00000587457 A0A0A6YYK5 440 aaPredicted RBP17.03■□□□□ 0.32
PPP6R1-204ENST00000587457 GNA14O95837 355 aa17.03■□□□□ 0.32
PPP6R1-204ENST00000587457 ARP10275 920 aa17.03■□□□□ 0.32
PPP6R1-204ENST00000587457 GM2AP17900 193 aa17.03■□□□□ 0.32
PPP6R1-204ENST00000587457 HOXA7P31268 230 aaPredicted RBP17.03■□□□□ 0.32
PPP6R1-204ENST00000587457 MAPK7Q13164 816 aa17.03■□□□□ 0.32
PPP6R1-204ENST00000587457 DHX34Q14147 1143 aaKnown RBP17.03■□□□□ 0.32
PPP6R1-204ENST00000587457 GIT2Q14161 759 aa17.03■□□□□ 0.32
PPP6R1-204ENST00000587457 PPP2R5EQ16537 467 aa17.03■□□□□ 0.32
PPP6R1-204ENST00000587457 PARP6Q2NL67 630 aa17.03■□□□□ 0.32
PPP6R1-204ENST00000587457 CEP55Q53EZ4 464 aa17.03■□□□□ 0.32
PPP6R1-204ENST00000587457 RNF43Q68DV7 783 aa17.03■□□□□ 0.32
PPP6R1-204ENST00000587457 CGB2Q6NT52 195 aa17.03■□□□□ 0.32
PPP6R1-204ENST00000587457 FOXR2Q6PJQ5 311 aa17.03■□□□□ 0.32
PPP6R1-204ENST00000587457 DNAJC9Q8WXX5 260 aa17.03■□□□□ 0.32
PPP6R1-204ENST00000587457 ARHGEF2Q92974 986 aaKnown RBP17.03■□□□□ 0.32
PPP6R1-204ENST00000587457 NUDCD1Q96RS6 583 aa17.03■□□□□ 0.32
PPP6R1-204ENST00000587457 BHMT2Q9H2M3 363 aa17.03■□□□□ 0.32
PPP6R1-204ENST00000587457 EHMT1Q9H9B1 1298 aa17.03■□□□□ 0.32
PPP6R1-204ENST00000587457 RAVER2Q9HCJ3 691 aaKnown RBP17.03■□□□□ 0.32
PPP6R1-204ENST00000587457 OSGEPQ9NPF4 335 aa17.03■□□□□ 0.32
PPP6R1-204ENST00000587457 HOMER2Q9NSB8 354 aa17.03■□□□□ 0.32
PPP6R1-204ENST00000587457 COL20A1Q9P218 1284 aa17.03■□□□□ 0.32
PPP6R1-204ENST00000587457 LTBP3Q9NS15 1303 aa17.03■□□□□ 0.32
PPP6R1-204ENST00000587457 H0Y3Z8 333 aa17.02■□□□□ 0.32
PPP6R1-204ENST00000587457 PSMD10O75832 226 aa17.02■□□□□ 0.32
PPP6R1-204ENST00000587457 UCHL3P15374 230 aa17.02■□□□□ 0.32
PPP6R1-204ENST00000587457 ACADSP16219 412 aa17.02■□□□□ 0.32
PPP6R1-204ENST00000587457 RPL21P46778 160 aaKnown RBP17.02■□□□□ 0.32
PPP6R1-204ENST00000587457 LONRF1Q17RB8 773 aa17.02■□□□□ 0.32
PPP6R1-204ENST00000587457 VSTM1Q6UX27 236 aa17.02■□□□□ 0.32
PPP6R1-204ENST00000587457 ARHGAP22Q7Z5H3 698 aa17.02■□□□□ 0.32
PPP6R1-204ENST00000587457 RBM46Q8TBY0 533 aaKnown RBP17.02■□□□□ 0.32
PPP6R1-204ENST00000587457 U2AF1L4Q8WU68 220 aaKnown RBP17.02■□□□□ 0.32
PPP6R1-204ENST00000587457 SCFD1Q8WVM8 642 aa17.02■□□□□ 0.32
PPP6R1-204ENST00000587457 LPAR1Q92633 364 aa17.02■□□□□ 0.32
PPP6R1-204ENST00000587457 REEP2Q9BRK0 252 aa17.02■□□□□ 0.32
PPP6R1-204ENST00000587457 TXLNGQ9NUQ3 528 aa17.02■□□□□ 0.32
PPP6R1-204ENST00000587457 MTRF1LQ9UGC7 380 aaKnown RBP17.02■□□□□ 0.32
PPP6R1-204ENST00000587457 RASAL2Q9UJF2 1139 aa17.02■□□□□ 0.32
PPP6R1-204ENST00000587457 ALAS1P13196 640 aa17.02■□□□□ 0.31
PPP6R1-204ENST00000587457 KRT13P13646 458 aa17.02■□□□□ 0.31
PPP6R1-204ENST00000587457 RANBP1P43487 201 aa17.02■□□□□ 0.31
PPP6R1-204ENST00000587457 PTDSS1P48651 473 aaKnown RBP17.02■□□□□ 0.31
PPP6R1-204ENST00000587457 NPEPPSP55786 919 aa17.02■□□□□ 0.31
PPP6R1-204ENST00000587457 TSNAXIP1Q2TAA8 658 aa17.02■□□□□ 0.31
PPP6R1-204ENST00000587457 MFSD5Q6N075 450 aa17.02■□□□□ 0.31
PPP6R1-204ENST00000587457 APBB1IPQ7Z5R6 666 aaPredicted RBP17.02■□□□□ 0.31
PPP6R1-204ENST00000587457 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.02■□□□□ 0.31
PPP6R1-204ENST00000587457 FAM13CQ8NE31 585 aa17.02■□□□□ 0.31
PPP6R1-204ENST00000587457 ASAP3Q8TDY4 903 aa17.02■□□□□ 0.31
PPP6R1-204ENST00000587457 CLEC4DQ8WXI8 215 aa17.02■□□□□ 0.31
PPP6R1-204ENST00000587457 SLC5A5Q92911 643 aa17.02■□□□□ 0.31
PPP6R1-204ENST00000587457 C18orf8Q96DM3 657 aa17.02■□□□□ 0.31
PPP6R1-204ENST00000587457 DYDC2Q96IM9 177 aa17.02■□□□□ 0.31
PPP6R1-204ENST00000587457 POLR3CQ9BUI4 534 aaPredicted RBP17.02■□□□□ 0.31
PPP6R1-204ENST00000587457 RUSC1Q9BVN2 902 aa17.02■□□□□ 0.31
PPP6R1-204ENST00000587457 BCAS3Q9H6U6 928 aa17.02■□□□□ 0.31
PPP6R1-204ENST00000587457 PITPNM2Q9BZ72 1349 aa17.02■□□□□ 0.31
PPP6R1-204ENST00000587457 FOXO6A8MYZ6 492 aa17.01■□□□□ 0.31
PPP6R1-204ENST00000587457 RSPH10B2B2RC85 870 aa17.01■□□□□ 0.31
PPP6R1-204ENST00000587457 GAS7O60861 476 aa17.01■□□□□ 0.31
PPP6R1-204ENST00000587457 AFPP02771 609 aaKnown RBP17.01■□□□□ 0.31
PPP6R1-204ENST00000587457 RSPH10BP0C881 870 aa17.01■□□□□ 0.31
PPP6R1-204ENST00000587457 VCAM1P19320 739 aa17.01■□□□□ 0.31
PPP6R1-204ENST00000587457 PTGIRP43119 386 aa17.01■□□□□ 0.31
PPP6R1-204ENST00000587457 CASP5P51878 434 aa17.01■□□□□ 0.31
PPP6R1-204ENST00000587457 GALCP54803 685 aa17.01■□□□□ 0.31
PPP6R1-204ENST00000587457 CUL3Q13618 768 aa17.01■□□□□ 0.31
PPP6R1-204ENST00000587457 TPH2Q8IWU9 490 aa17.01■□□□□ 0.31
PPP6R1-204ENST00000587457 TMEM237Q96Q45 408 aa17.01■□□□□ 0.31
PPP6R1-204ENST00000587457 TGS1Q96RS0 853 aaKnown RBP17.01■□□□□ 0.31
PPP6R1-204ENST00000587457 ZNF577Q9BSK1 485 aa17.01■□□□□ 0.31
PPP6R1-204ENST00000587457 EMILIN3Q9NT22 766 aa17.01■□□□□ 0.31
PPP6R1-204ENST00000587457 NENFQ9UMX5 172 aa17.01■□□□□ 0.31
PPP6R1-204ENST00000587457 RABGAP1Q9Y3P9 1069 aa17.01■□□□□ 0.31
PPP6R1-204ENST00000587457 STK24Q9Y6E0 443 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms