RNA–Protein interactions for RNA: ENST00000587260.1

NFIX-208, Transcript of nuclear factor I X, humanhuman

TSL 1 (best) BASIC

Gene NFIX, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-208ENST00000587260 SMG8Q8ND04 991 aaKnown RBP16.2■□□□□ 0.18
NFIX-208ENST00000587260 IL23AQ9NPF7 189 aa16.2■□□□□ 0.18
NFIX-208ENST00000587260 RGS18Q9NS28 235 aa16.2■□□□□ 0.18
NFIX-208ENST00000587260 SNTG2Q9NY99 539 aa16.2■□□□□ 0.18
NFIX-208ENST00000587260 RBAKQ9NYW8 714 aaPredicted RBP16.2■□□□□ 0.18
NFIX-208ENST00000587260 MEIS3P2A8K0S8 358 aa16.19■□□□□ 0.18
NFIX-208ENST00000587260 KRT13P13646 458 aa16.19■□□□□ 0.18
NFIX-208ENST00000587260 AKAP5P24588 427 aa16.19■□□□□ 0.18
NFIX-208ENST00000587260 GRM5P41594 1212 aa16.19■□□□□ 0.18
NFIX-208ENST00000587260 RAB27AP51159 221 aa16.19■□□□□ 0.18
NFIX-208ENST00000587260 VAMP7P51809 220 aa16.19■□□□□ 0.18
NFIX-208ENST00000587260 CLDN10P78369 228 aa16.19■□□□□ 0.18
NFIX-208ENST00000587260 UBXN1Q04323 297 aa16.19■□□□□ 0.18
NFIX-208ENST00000587260 CYP24A1Q07973 514 aa16.19■□□□□ 0.18
NFIX-208ENST00000587260 KCNH2Q12809 1159 aa16.19■□□□□ 0.18
NFIX-208ENST00000587260 KYAT1Q16773 422 aa16.19■□□□□ 0.18
NFIX-208ENST00000587260 USP37Q86T82 979 aa16.19■□□□□ 0.18
NFIX-208ENST00000587260 PARD3BQ8TEW8 1205 aa16.19■□□□□ 0.18
NFIX-208ENST00000587260 LPPQ93052 612 aa16.19■□□□□ 0.18
NFIX-208ENST00000587260 FAM212AQ96EL1 285 aa16.19■□□□□ 0.18
NFIX-208ENST00000587260 ERGIC2Q96RQ1 377 aa16.19■□□□□ 0.18
NFIX-208ENST00000587260 CCDC94Q9BW85 323 aaPredicted RBP16.19■□□□□ 0.18
NFIX-208ENST00000587260 TSPYL2Q9H2G4 693 aaPredicted RBP16.19■□□□□ 0.18
NFIX-208ENST00000587260 RNF39Q9H2S5 420 aa16.19■□□□□ 0.18
NFIX-208ENST00000587260 PARP2Q9UGN5 583 aa16.19■□□□□ 0.18
NFIX-208ENST00000587260 CPSF3Q9UKF6 684 aaKnown RBP16.19■□□□□ 0.18
NFIX-208ENST00000587260 ITIH6Q6UXX5 1313 aa16.19■□□□□ 0.18
NFIX-208ENST00000587260 PMM2O15305 246 aa16.19■□□□□ 0.18
NFIX-208ENST00000587260 RECQL4O94761 1208 aa16.19■□□□□ 0.18
NFIX-208ENST00000587260 AFPP02771 609 aaKnown RBP16.19■□□□□ 0.18
NFIX-208ENST00000587260 PFKMP08237 780 aa16.19■□□□□ 0.18
NFIX-208ENST00000587260 DEKP35659 375 aaKnown RBP16.19■□□□□ 0.18
NFIX-208ENST00000587260 EPHB4P54760 987 aa16.19■□□□□ 0.18
NFIX-208ENST00000587260 WNT7BP56706 349 aa16.19■□□□□ 0.18
NFIX-208ENST00000587260 IKBKEQ14164 716 aa16.19■□□□□ 0.18
NFIX-208ENST00000587260 DCAF17Q5H9S7 520 aaPredicted RBP16.19■□□□□ 0.18
NFIX-208ENST00000587260 FKBP15Q5T1M5 1219 aa16.19■□□□□ 0.18
NFIX-208ENST00000587260 SLC24A5Q71RS6 500 aa16.19■□□□□ 0.18
NFIX-208ENST00000587260 OTOP2Q7RTS6 562 aa16.19■□□□□ 0.18
NFIX-208ENST00000587260 ECHDC2Q86YB7 292 aa16.19■□□□□ 0.18
NFIX-208ENST00000587260 RPUSD2Q8IZ73 545 aaKnown RBP16.19■□□□□ 0.18
NFIX-208ENST00000587260 LBHD1Q9BQE6 289 aaPredicted RBP16.19■□□□□ 0.18
NFIX-208ENST00000587260 C1orf112Q9NSG2 853 aa16.19■□□□□ 0.18
NFIX-208ENST00000587260 A0A0U1RQF3 1178 aa16.18■□□□□ 0.18
NFIX-208ENST00000587260 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.18■□□□□ 0.18
NFIX-208ENST00000587260 GTPBP10A4D1E9 387 aaKnown RBP16.18■□□□□ 0.18
NFIX-208ENST00000587260 C9IYK1 514 aa16.18■□□□□ 0.18
NFIX-208ENST00000587260 ENPP3O14638 875 aa16.18■□□□□ 0.18
NFIX-208ENST00000587260 MEFVO15553 781 aaPredicted RBP16.18■□□□□ 0.18
NFIX-208ENST00000587260 CLTAP09496 248 aa16.18■□□□□ 0.18
NFIX-208ENST00000587260 ITGA4P13612 1032 aa16.18■□□□□ 0.18
NFIX-208ENST00000587260 ATF7P17544 494 aaPredicted RBP16.18■□□□□ 0.18
NFIX-208ENST00000587260 PSMD6Q15008 389 aa16.18■□□□□ 0.18
NFIX-208ENST00000587260 ENOX2Q16206 610 aaKnown RBP16.18■□□□□ 0.18
NFIX-208ENST00000587260 C1orf220Q5T0J3 134 aa16.18■□□□□ 0.18
NFIX-208ENST00000587260 SPECC1LQ69YQ0 1117 aa16.18■□□□□ 0.18
NFIX-208ENST00000587260 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.18■□□□□ 0.18
NFIX-208ENST00000587260 FAM43BQ6ZT52 329 aaPredicted RBP16.18■□□□□ 0.18
NFIX-208ENST00000587260 BRSK2Q8IWQ3 736 aa16.18■□□□□ 0.18
NFIX-208ENST00000587260 PLEKHO2Q8TD55 490 aa16.18■□□□□ 0.18
NFIX-208ENST00000587260 CCDC127Q96BQ5 260 aa16.18■□□□□ 0.18
NFIX-208ENST00000587260 ACAP3Q96P50 834 aa16.18■□□□□ 0.18
NFIX-208ENST00000587260 TRAIPQ9BWF2 469 aa16.18■□□□□ 0.18
NFIX-208ENST00000587260 RPF1Q9H9Y2 349 aaKnown RBP16.18■□□□□ 0.18
NFIX-208ENST00000587260 KLK14Q9P0G3 267 aa16.18■□□□□ 0.18
NFIX-208ENST00000587260 IMPACTQ9P2X3 320 aa16.18■□□□□ 0.18
NFIX-208ENST00000587260 NR2E3Q9Y5X4 410 aa16.18■□□□□ 0.18
NFIX-208ENST00000587260 TDRD15B5MCY1 1934 aaKnown RBP16.18■□□□□ 0.18
NFIX-208ENST00000587260 P4HA2O15460 535 aa16.17■□□□□ 0.18
NFIX-208ENST00000587260 STX10O60499 249 aa16.17■□□□□ 0.18
NFIX-208ENST00000587260 TRIM49P0CI25 452 aa16.17■□□□□ 0.18
NFIX-208ENST00000587260 TRIM49CP0CI26 452 aa16.17■□□□□ 0.18
NFIX-208ENST00000587260 GTF2H1P32780 548 aa16.17■□□□□ 0.18
NFIX-208ENST00000587260 YARSP54577 528 aaKnown RBP16.17■□□□□ 0.18
NFIX-208ENST00000587260 TCERG1LQ5VWI1 586 aa16.17■□□□□ 0.18
NFIX-208ENST00000587260 C16orf59Q7L2K0 433 aa16.17■□□□□ 0.18
NFIX-208ENST00000587260 HACE1Q8IYU2 909 aa16.17■□□□□ 0.18
NFIX-208ENST00000587260 FAM84AQ96KN4 292 aa16.17■□□□□ 0.18
NFIX-208ENST00000587260 CXCL16Q9H2A7 254 aa16.17■□□□□ 0.18
NFIX-208ENST00000587260 MMRN2Q9H8L6 949 aa16.17■□□□□ 0.18
NFIX-208ENST00000587260 PDE11AQ9HCR9 933 aa16.17■□□□□ 0.18
NFIX-208ENST00000587260 RNF19AQ9NV58 838 aa16.17■□□□□ 0.18
NFIX-208ENST00000587260 ZBBXA8MT70 800 aa16.16■□□□□ 0.18
NFIX-208ENST00000587260 PES1O00541 588 aaKnown RBP16.16■□□□□ 0.18
NFIX-208ENST00000587260 DLATP10515 647 aaKnown RBP16.16■□□□□ 0.18
NFIX-208ENST00000587260 SKIP12755 728 aa16.16■□□□□ 0.18
NFIX-208ENST00000587260 ACTN1P12814 892 aa16.16■□□□□ 0.18
NFIX-208ENST00000587260 MLH1P40692 756 aa16.16■□□□□ 0.18
NFIX-208ENST00000587260 FMO5P49326 533 aa16.16■□□□□ 0.18
NFIX-208ENST00000587260 DLG4P78352 724 aa16.16■□□□□ 0.18
NFIX-208ENST00000587260 TBX2Q13207 712 aaPredicted RBP16.16■□□□□ 0.18
NFIX-208ENST00000587260 SURF1Q15526 300 aa16.16■□□□□ 0.18
NFIX-208ENST00000587260 LMBRD2Q68DH5 695 aaPredicted RBP16.16■□□□□ 0.18
NFIX-208ENST00000587260 ZNF365Q70YC5 407 aa16.16■□□□□ 0.18
NFIX-208ENST00000587260 SNX27Q96L92 541 aa16.16■□□□□ 0.18
NFIX-208ENST00000587260 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.16■□□□□ 0.18
NFIX-208ENST00000587260 SIK3Q9Y2K2 1263 aa16.16■□□□□ 0.18
NFIX-208ENST00000587260 TTC3P53804 2025 aa16.16■□□□□ 0.18
NFIX-208ENST00000587260 PTPRJQ12913 1337 aa16.15■□□□□ 0.18
NFIX-208ENST00000587260 LACTBL1A8MY62 500 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms