RNA–Protein interactions for RNA: ENST00000586869.5

NLE1-203, Transcript of notchless homolog 1, humanhuman

TSL 1 (best) BASIC

Gene NLE1, Length 5,286 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLE1-203ENST00000586869 LINC00116Q8NCU8 138 aa18.89■□□□□ 0.61
NLE1-203ENST00000586869 SCFD1Q8WVM8 642 aa18.89■□□□□ 0.61
NLE1-203ENST00000586869 FAM161BQ96MY7 647 aa18.89■□□□□ 0.61
NLE1-203ENST00000586869 AGPAT3Q9NRZ7 376 aa18.89■□□□□ 0.61
NLE1-203ENST00000586869 KIAA0391O15091 583 aaKnown RBP18.88■□□□□ 0.61
NLE1-203ENST00000586869 MED24O75448 989 aa18.88■□□□□ 0.61
NLE1-203ENST00000586869 ART3Q13508 389 aa18.88■□□□□ 0.61
NLE1-203ENST00000586869 CDC42EP5Q6NZY7 148 aa18.88■□□□□ 0.61
NLE1-203ENST00000586869 NEU2Q9Y3R4 380 aa18.88■□□□□ 0.61
NLE1-203ENST00000586869 A0A0U1RQJ8 604 aa18.88■□□□□ 0.61
NLE1-203ENST00000586869 AP3M2P53677 418 aa18.88■□□□□ 0.61
NLE1-203ENST00000586869 STX1BP61266 288 aa18.88■□□□□ 0.61
NLE1-203ENST00000586869 AP2B1P63010 937 aa18.88■□□□□ 0.61
NLE1-203ENST00000586869 ARMC2Q8NEN0 867 aa18.88■□□□□ 0.61
NLE1-203ENST00000586869 ZHX2Q9Y6X8 837 aa18.88■□□□□ 0.61
NLE1-203ENST00000586869 CES2O00748 559 aa18.88■□□□□ 0.61
NLE1-203ENST00000586869 ITGA8P53708 1063 aa18.88■□□□□ 0.61
NLE1-203ENST00000586869 RTKN2Q8IZC4 609 aa18.88■□□□□ 0.61
NLE1-203ENST00000586869 PPWD1Q96BP3 646 aaKnown RBP18.88■□□□□ 0.61
NLE1-203ENST00000586869 NLRP4Q96MN2 994 aa18.88■□□□□ 0.61
NLE1-203ENST00000586869 RPS6KC1Q96S38 1066 aa18.88■□□□□ 0.61
NLE1-203ENST00000586869 TMEM117Q9H0C3 514 aa18.88■□□□□ 0.61
NLE1-203ENST00000586869 GTF3C4Q9UKN8 822 aa18.88■□□□□ 0.61
NLE1-203ENST00000586869 PRR12Q9ULL5 1215 aa18.88■□□□□ 0.61
NLE1-203ENST00000586869 CCDC22O60826 627 aa18.88■□□□□ 0.61
NLE1-203ENST00000586869 HSPA4LO95757 839 aa18.88■□□□□ 0.61
NLE1-203ENST00000586869 FSCBQ5H9T9 825 aa18.88■□□□□ 0.61
NLE1-203ENST00000586869 CPA5Q8WXQ8 436 aa18.88■□□□□ 0.61
NLE1-203ENST00000586869 ALKBH8Q96BT7 664 aaKnown RBP18.88■□□□□ 0.61
NLE1-203ENST00000586869 ERP27Q96DN0 273 aa18.88■□□□□ 0.61
NLE1-203ENST00000586869 NOD2Q9HC29 1040 aa18.88■□□□□ 0.61
NLE1-203ENST00000586869 CD248Q9HCU0 757 aa18.88■□□□□ 0.61
NLE1-203ENST00000586869 IPO11Q9UI26 975 aaKnown RBP18.88■□□□□ 0.61
NLE1-203ENST00000586869 HEY1Q9Y5J3 304 aa18.88■□□□□ 0.61
NLE1-203ENST00000586869 CENPCQ03188 943 aa18.87■□□□□ 0.61
NLE1-203ENST00000586869 RHPN2Q8IUC4 686 aa18.87■□□□□ 0.61
NLE1-203ENST00000586869 NUDCD3Q8IVD9 361 aa18.87■□□□□ 0.61
NLE1-203ENST00000586869 FAM167AQ96KS9 214 aa18.87■□□□□ 0.61
NLE1-203ENST00000586869 OSBPL8Q9BZF1 889 aa18.87■□□□□ 0.61
NLE1-203ENST00000586869 AFG3L2Q9Y4W6 797 aa18.87■□□□□ 0.61
NLE1-203ENST00000586869 TTC4O95801 387 aa18.87■□□□□ 0.61
NLE1-203ENST00000586869 ROR1Q01973 937 aa18.87■□□□□ 0.61
NLE1-203ENST00000586869 RNF146Q9NTX7 359 aa18.87■□□□□ 0.61
NLE1-203ENST00000586869 PSMC3IPQ9P2W1 217 aaPredicted RBP18.87■□□□□ 0.61
NLE1-203ENST00000586869 NOD1Q9Y239 953 aa18.87■□□□□ 0.61
NLE1-203ENST00000586869 SCTRP47872 440 aa18.87■□□□□ 0.61
NLE1-203ENST00000586869 GABPAQ06546 454 aa18.87■□□□□ 0.61
NLE1-203ENST00000586869 FOXR1Q6PIV2 292 aa18.87■□□□□ 0.61
NLE1-203ENST00000586869 ZNF507Q8TCN5 953 aa18.87■□□□□ 0.61
NLE1-203ENST00000586869 RASSF10A6NK89 507 aa18.87■□□□□ 0.61
NLE1-203ENST00000586869 SKOR1P84550 965 aa18.87■□□□□ 0.61
NLE1-203ENST00000586869 GIT2Q14161 759 aa18.87■□□□□ 0.61
NLE1-203ENST00000586869 STXBP2Q15833 593 aa18.87■□□□□ 0.61
NLE1-203ENST00000586869 BTNL9Q6UXG8 535 aa18.87■□□□□ 0.61
NLE1-203ENST00000586869 RIT2Q99578 217 aa18.87■□□□□ 0.61
NLE1-203ENST00000586869 SENP7Q9BQF6 1050 aa18.87■□□□□ 0.61
NLE1-203ENST00000586869 PCDHB2Q9Y5E7 798 aa18.87■□□□□ 0.61
NLE1-203ENST00000586869 PI4K2BG5E9Z4 385 aa18.87■□□□□ 0.61
NLE1-203ENST00000586869 ATMINO43313 823 aaPredicted RBP18.87■□□□□ 0.61
NLE1-203ENST00000586869 MAGEA4P43358 317 aa18.87■□□□□ 0.61
NLE1-203ENST00000586869 SPOPLQ6IQ16 392 aa18.87■□□□□ 0.61
NLE1-203ENST00000586869 PRR5LQ6MZQ0 368 aa18.87■□□□□ 0.61
NLE1-203ENST00000586869 ZNF662Q6ZS27 426 aa18.87■□□□□ 0.61
NLE1-203ENST00000586869 CCDC117Q8IWD4 279 aaPredicted RBP18.87■□□□□ 0.61
NLE1-203ENST00000586869 RIOX1Q9H6W3 641 aa18.87■□□□□ 0.61
NLE1-203ENST00000586869 NDE1Q9NXR1 346 aa18.87■□□□□ 0.61
NLE1-203ENST00000586869 RARGP13631 454 aa18.86■□□□□ 0.61
NLE1-203ENST00000586869 GPC3P51654 580 aa18.86■□□□□ 0.61
NLE1-203ENST00000586869 CIAPIN1Q6FI81 312 aa18.86■□□□□ 0.61
NLE1-203ENST00000586869 ANKMY2Q8IV38 441 aa18.86■□□□□ 0.61
NLE1-203ENST00000586869 RUSC1Q9BVN2 902 aa18.86■□□□□ 0.61
NLE1-203ENST00000586869 TMEM8AQ9HCN3 771 aa18.86■□□□□ 0.61
NLE1-203ENST00000586869 GDF3Q9NR23 364 aa18.86■□□□□ 0.61
NLE1-203ENST00000586869 IGF2BP3O00425 579 aaKnown RBP eCLIP18.86■□□□□ 0.61
NLE1-203ENST00000586869 PFDN1O60925 122 aa18.86■□□□□ 0.61
NLE1-203ENST00000586869 COPS2P61201 443 aa18.86■□□□□ 0.61
NLE1-203ENST00000586869 TMEM139Q8IV31 216 aa18.86■□□□□ 0.61
NLE1-203ENST00000586869 HIPK4Q8NE63 616 aa18.86■□□□□ 0.61
NLE1-203ENST00000586869 MSH4O15457 936 aa18.86■□□□□ 0.61
NLE1-203ENST00000586869 CFLARO15519 480 aa18.86■□□□□ 0.61
NLE1-203ENST00000586869 KITP10721 976 aa18.86■□□□□ 0.61
NLE1-203ENST00000586869 ITKQ08881 620 aa18.86■□□□□ 0.61
NLE1-203ENST00000586869 SLC10A5Q5PT55 438 aa18.86■□□□□ 0.61
NLE1-203ENST00000586869 WWP1Q9H0M0 922 aa18.86■□□□□ 0.61
NLE1-203ENST00000586869 CAND2O75155 1236 aa18.86■□□□□ 0.61
NLE1-203ENST00000586869 MX2P20592 715 aa18.86■□□□□ 0.61
NLE1-203ENST00000586869 ESRRGP62508 458 aa18.86■□□□□ 0.61
NLE1-203ENST00000586869 C4orf33Q8N1A6 199 aa18.86■□□□□ 0.61
NLE1-203ENST00000586869 APOL6Q9BWW8 343 aa18.86■□□□□ 0.61
NLE1-203ENST00000586869 LRRC4Q9HBW1 653 aa18.86■□□□□ 0.61
NLE1-203ENST00000586869 ZNF302Q9NR11 478 aa18.86■□□□□ 0.61
NLE1-203ENST00000586869 G3BP2Q9UN86 482 aaKnown RBP18.86■□□□□ 0.61
NLE1-203ENST00000586869 FOXN3O00409 490 aaPredicted RBP18.85■□□□□ 0.61
NLE1-203ENST00000586869 LONP2Q86WA8 852 aa18.85■□□□□ 0.61
NLE1-203ENST00000586869 KIF2BQ8N4N8 673 aa18.85■□□□□ 0.61
NLE1-203ENST00000586869 SPATA20Q8TB22 786 aa18.85■□□□□ 0.61
NLE1-203ENST00000586869 HDAC11Q96DB2 347 aa18.85■□□□□ 0.61
NLE1-203ENST00000586869 KDM4CQ9H3R0 1056 aa18.85■□□□□ 0.61
NLE1-203ENST00000586869 IL17RBQ9NRM6 502 aa18.85■□□□□ 0.61
NLE1-203ENST00000586869 IFT172Q9UG01 1749 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms