RNA–Protein interactions for RNA: ENST00000586813.5

TRAF4-216, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-216ENST00000586813 ELAVL2Q12926 359 aaKnown RBP21.33■■□□□ 1.01
TRAF4-216ENST00000586813 HTR4Q13639 388 aa21.33■■□□□ 1.01
TRAF4-216ENST00000586813 ECM1Q16610 540 aa21.33■■□□□ 1.01
TRAF4-216ENST00000586813 DCAF4L1Q3SXM0 396 aa21.33■■□□□ 1.01
TRAF4-216ENST00000586813 LIN9Q5TKA1 542 aa21.33■■□□□ 1.01
TRAF4-216ENST00000586813 DTWD2Q8NBA8 298 aa21.33■■□□□ 1.01
TRAF4-216ENST00000586813 FBXO18Q8NFZ0 1043 aa21.33■■□□□ 1.01
TRAF4-216ENST00000586813 BHMT2Q9H2M3 363 aa21.33■■□□□ 1.01
TRAF4-216ENST00000586813 CA14Q9ULX7 337 aa21.33■■□□□ 1.01
TRAF4-216ENST00000586813 GDAQ9Y2T3 454 aa21.33■■□□□ 1.01
TRAF4-216ENST00000586813 HNRNPA1P09651 372 aaKnown RBP eCLIP21.32■■□□□ 1
TRAF4-216ENST00000586813 FSHRP23945 695 aa21.32■■□□□ 1
TRAF4-216ENST00000586813 CCT6AP40227 531 aaKnown RBP21.32■■□□□ 1
TRAF4-216ENST00000586813 TRAPPC10P48553 1259 aa21.32■■□□□ 1
TRAF4-216ENST00000586813 RBM25P49756 843 aaKnown RBP21.32■■□□□ 1
TRAF4-216ENST00000586813 FXR2P51116 673 aaKnown RBP eCLIP21.32■■□□□ 1
TRAF4-216ENST00000586813 EFNA5P52803 228 aa21.32■■□□□ 1
TRAF4-216ENST00000586813 ANGPT1Q15389 498 aa21.32■■□□□ 1
TRAF4-216ENST00000586813 PDXDC1Q6P996 788 aa21.32■■□□□ 1
TRAF4-216ENST00000586813 IFT74Q96LB3 600 aa21.32■■□□□ 1
TRAF4-216ENST00000586813 NUMBLQ9Y6R0 609 aa21.32■■□□□ 1
TRAF4-216ENST00000586813 CITO14578 2027 aa21.31■■□□□ 1
TRAF4-216ENST00000586813 TMEM189-UBE2V1I3L0A0 370 aa21.31■■□□□ 1
TRAF4-216ENST00000586813 STK25O00506 426 aa21.31■■□□□ 1
TRAF4-216ENST00000586813 ADAM12O43184 909 aa21.31■■□□□ 1
TRAF4-216ENST00000586813 C8AP07357 584 aa21.31■■□□□ 1
TRAF4-216ENST00000586813 RFX1P22670 979 aa21.31■■□□□ 1
TRAF4-216ENST00000586813 HOXA9P31269 272 aa21.31■■□□□ 1
TRAF4-216ENST00000586813 GNL2Q13823 731 aaKnown RBP21.31■■□□□ 1
TRAF4-216ENST00000586813 NBR1Q14596 966 aa21.31■■□□□ 1
TRAF4-216ENST00000586813 GLRA4Q5JXX5 417 aa21.31■■□□□ 1
TRAF4-216ENST00000586813 PPM1LQ5SGD2 360 aa21.31■■□□□ 1
TRAF4-216ENST00000586813 NT5DC1Q5TFE4 455 aa21.31■■□□□ 1
TRAF4-216ENST00000586813 ATF7IP2Q5U623 682 aa21.31■■□□□ 1
TRAF4-216ENST00000586813 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.31■■□□□ 1
TRAF4-216ENST00000586813 GRASPQ7Z6J2 395 aaPredicted RBP21.31■■□□□ 1
TRAF4-216ENST00000586813 C4orf32Q8N8J7 132 aa21.31■■□□□ 1
TRAF4-216ENST00000586813 GPR152Q8TDT2 470 aa21.31■■□□□ 1
TRAF4-216ENST00000586813 KIFAP3Q92845 792 aa21.31■■□□□ 1
TRAF4-216ENST00000586813 NKD2Q969F2 451 aaPredicted RBP21.31■■□□□ 1
TRAF4-216ENST00000586813 PPP1R10Q96QC0 940 aaKnown RBP21.31■■□□□ 1
TRAF4-216ENST00000586813 TBC1D17Q9HA65 648 aa21.31■■□□□ 1
TRAF4-216ENST00000586813 POLD4Q9HCU8 107 aa21.31■■□□□ 1
TRAF4-216ENST00000586813 DAXXQ9UER7 740 aaPredicted RBP21.31■■□□□ 1
TRAF4-216ENST00000586813 ZFP37Q9Y6Q3 630 aaPredicted RBP21.31■■□□□ 1
TRAF4-216ENST00000586813 MIA3Q5JRA6 1907 aa21.31■■□□□ 1
TRAF4-216ENST00000586813 NOTCH4Q99466 2003 aa21.31■■□□□ 1
TRAF4-216ENST00000586813 PDCD11Q14690 1871 aaKnown RBP21.3■■□□□ 1
TRAF4-216ENST00000586813 HMGN5P82970 282 aaKnown RBP21.3■■□□□ 1
TRAF4-216ENST00000586813 SLC2A4RGQ9NR83 387 aa21.3■■□□□ 1
TRAF4-216ENST00000586813 LRWD1Q9UFC0 647 aa21.3■■□□□ 1
TRAF4-216ENST00000586813 NOL7Q9UMY1 257 aaKnown RBP21.3■■□□□ 1
TRAF4-216ENST00000586813 KIAA1024Q9UPX6 916 aa21.3■■□□□ 1
TRAF4-216ENST00000586813 FAM186AA6NE01 2351 aa21.29■■□□□ 1
TRAF4-216ENST00000586813 MYH11P35749 1972 aa21.29■■□□□ 1
TRAF4-216ENST00000586813 B3GAT3O94766 335 aa21.29■■□□□ 1
TRAF4-216ENST00000586813 FGFR3P22607 806 aa21.29■■□□□ 1
TRAF4-216ENST00000586813 NTHL1P78549 312 aa21.29■■□□□ 1
TRAF4-216ENST00000586813 APBB1IPQ7Z5R6 666 aaPredicted RBP21.29■■□□□ 1
TRAF4-216ENST00000586813 FAM184AQ8NB25 1140 aa21.29■■□□□ 1
TRAF4-216ENST00000586813 ST13P5Q8NFI4 369 aaPredicted RBP21.29■■□□□ 1
TRAF4-216ENST00000586813 SLC7A14Q8TBB6 771 aa21.29■■□□□ 1
TRAF4-216ENST00000586813 ARHGEF3Q9NR81 526 aa21.29■■□□□ 1
TRAF4-216ENST00000586813 DDX19AQ9NUU7 478 aaKnown RBP21.29■■□□□ 1
TRAF4-216ENST00000586813 MTRRQ9UBK8 725 aa21.29■■□□□ 1
TRAF4-216ENST00000586813 CDH7Q9ULB5 785 aa21.29■■□□□ 1
TRAF4-216ENST00000586813 PHLPP2Q6ZVD8 1323 aa21.29■■□□□ 1
TRAF4-216ENST00000586813 RIF1Q5UIP0 2472 aaKnown RBP21.28■■□□□ 1
TRAF4-216ENST00000586813 CCL16O15467 120 aa21.28■■□□□ 1
TRAF4-216ENST00000586813 XYLBO75191 536 aa21.28■■□□□ 1
TRAF4-216ENST00000586813 IGFBP6P24592 240 aaPredicted RBP21.28■■□□□ 1
TRAF4-216ENST00000586813 CLCNKBP51801 687 aa21.28■■□□□ 1
TRAF4-216ENST00000586813 RAB33AQ14088 237 aa21.28■■□□□ 1
TRAF4-216ENST00000586813 ERICH6BQ5W0A0 696 aa21.28■■□□□ 1
TRAF4-216ENST00000586813 IGSF22Q8N9C0 903 aa21.28■■□□□ 1
TRAF4-216ENST00000586813 SNX29Q8TEQ0 813 aa21.28■■□□□ 1
TRAF4-216ENST00000586813 FGF14Q92915 247 aa21.28■■□□□ 1
TRAF4-216ENST00000586813 UROC1Q96N76 676 aa21.28■■□□□ 1
TRAF4-216ENST00000586813 POLIQ9UNA4 740 aa21.28■■□□□ 1
TRAF4-216ENST00000586813 TNFSF13BQ9Y275 285 aa21.28■■□□□ 1
TRAF4-216ENST00000586813 K7ERI5 159 aa21.27■■□□□ 1
TRAF4-216ENST00000586813 POU2F2P09086 479 aa21.27■■□□□ 1
TRAF4-216ENST00000586813 OR1D2P34982 312 aa21.27■■□□□ 1
TRAF4-216ENST00000586813 PDIA5Q14554 519 aa21.27■■□□□ 1
TRAF4-216ENST00000586813 UPP1Q16831 310 aa21.27■■□□□ 1
TRAF4-216ENST00000586813 AXDND1Q5T1B0 1012 aaPredicted RBP21.27■■□□□ 1
TRAF4-216ENST00000586813 PHLDB3Q6NSJ2 640 aa21.27■■□□□ 1
TRAF4-216ENST00000586813 DCLRE1AQ6PJP8 1040 aa21.27■■□□□ 1
TRAF4-216ENST00000586813 PARM1Q6UWI2 310 aa21.27■■□□□ 1
TRAF4-216ENST00000586813 CEP120Q8N960 986 aa21.27■■□□□ 1
TRAF4-216ENST00000586813 FGF13Q92913 245 aa21.27■■□□□ 1
TRAF4-216ENST00000586813 ZSCAN31Q96LW9 406 aaPredicted RBP21.27■■□□□ 1
TRAF4-216ENST00000586813 RAB34Q9BZG1 259 aa21.27■■□□□ 1
TRAF4-216ENST00000586813 GOLGA2P5Q9HBQ8 144 aa21.27■■□□□ 1
TRAF4-216ENST00000586813 SH2B1Q9NRF2 756 aaPredicted RBP21.27■■□□□ 1
TRAF4-216ENST00000586813 STK24Q9Y6E0 443 aa21.27■■□□□ 1
TRAF4-216ENST00000586813 FANCMQ8IYD8 2048 aa21.26■□□□□ 0.99
TRAF4-216ENST00000586813 PTPRZ1P23471 2315 aaPredicted RBP21.26■□□□□ 0.99
TRAF4-216ENST00000586813 COL4A3Q01955 1670 aa21.26■□□□□ 0.99
TRAF4-216ENST00000586813 CCDC169A6NNP5 214 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms