RNA–Protein interactions for RNA: ENST00000585876.1

LRFN3-202, Transcript of leucine rich repeat and fibronectin type III domain containing 3, humanhuman

TSL 4

Gene LRFN3, Length 558 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3-202ENST00000585876 ACAP3Q96P50 834 aa12.68□□□□□ -0.38
LRFN3-202ENST00000585876 PPP1R10Q96QC0 940 aaKnown RBP12.68□□□□□ -0.38
LRFN3-202ENST00000585876 RPS6KC1Q96S38 1066 aa12.68□□□□□ -0.38
LRFN3-202ENST00000585876 TSPAN18Q96SJ8 248 aa12.68□□□□□ -0.38
LRFN3-202ENST00000585876 MSTO1Q9BUK6 570 aa12.68□□□□□ -0.38
LRFN3-202ENST00000585876 PLEKHA5Q9HAU0 1116 aa12.68□□□□□ -0.38
LRFN3-202ENST00000585876 EXOC1Q9NV70 894 aa12.68□□□□□ -0.38
LRFN3-202ENST00000585876 MIOSQ9NXC5 875 aa12.68□□□□□ -0.38
LRFN3-202ENST00000585876 SPG21Q9NZD8 308 aa12.68□□□□□ -0.38
LRFN3-202ENST00000585876 DNAJB4Q9UDY4 337 aa12.68□□□□□ -0.38
LRFN3-202ENST00000585876 STK39Q9UEW8 545 aa12.68□□□□□ -0.38
LRFN3-202ENST00000585876 PARP2Q9UGN5 583 aa12.68□□□□□ -0.38
LRFN3-202ENST00000585876 CPSF3Q9UKF6 684 aaKnown RBP12.68□□□□□ -0.38
LRFN3-202ENST00000585876 GDAQ9Y2T3 454 aa12.68□□□□□ -0.38
LRFN3-202ENST00000585876 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.68□□□□□ -0.38
LRFN3-202ENST00000585876 TTC26A0AVF1 554 aa12.67□□□□□ -0.38
LRFN3-202ENST00000585876 TISP43B9A030 160 aa12.67□□□□□ -0.38
LRFN3-202ENST00000585876 KIAA0391O15091 583 aaKnown RBP12.67□□□□□ -0.38
LRFN3-202ENST00000585876 GRM6O15303 877 aa12.67□□□□□ -0.38
LRFN3-202ENST00000585876 GALTP07902 379 aa12.67□□□□□ -0.38
LRFN3-202ENST00000585876 SLC11A1P49279 550 aa12.67□□□□□ -0.38
LRFN3-202ENST00000585876 YARSP54577 528 aaKnown RBP12.67□□□□□ -0.38
LRFN3-202ENST00000585876 PTPROQ16827 1216 aa12.67□□□□□ -0.38
LRFN3-202ENST00000585876 SLC10A6Q3KNW5 377 aa12.67□□□□□ -0.38
LRFN3-202ENST00000585876 KMT5BQ4FZB7 885 aa12.67□□□□□ -0.38
LRFN3-202ENST00000585876 SPOUT1Q5T280 376 aaKnown RBP12.67□□□□□ -0.38
LRFN3-202ENST00000585876 THNSL1Q8IYQ7 743 aa12.67□□□□□ -0.38
LRFN3-202ENST00000585876 RNF168Q8IYW5 571 aaPredicted RBP12.67□□□□□ -0.38
LRFN3-202ENST00000585876 IGSF21Q96ID5 467 aa12.67□□□□□ -0.38
LRFN3-202ENST00000585876 GBP3Q9H0R5 595 aa12.67□□□□□ -0.38
LRFN3-202ENST00000585876 CXCL16Q9H2A7 254 aa12.67□□□□□ -0.38
LRFN3-202ENST00000585876 IKZF4Q9H2S9 585 aa12.67□□□□□ -0.38
LRFN3-202ENST00000585876 KLK14Q9P0G3 267 aa12.67□□□□□ -0.38
LRFN3-202ENST00000585876 CGNQ9P2M7 1197 aaKnown RBP12.67□□□□□ -0.38
LRFN3-202ENST00000585876 NCOR1O75376 2440 aa12.67□□□□□ -0.38
LRFN3-202ENST00000585876 SCN1AP35498 2009 aa12.66□□□□□ -0.38
LRFN3-202ENST00000585876 SMIM28A0A1B0GU29 152 aa12.66□□□□□ -0.38
LRFN3-202ENST00000585876 KINO60870 393 aaKnown RBP12.66□□□□□ -0.38
LRFN3-202ENST00000585876 PRPF6O94906 941 aaKnown RBP12.66□□□□□ -0.38
LRFN3-202ENST00000585876 THP07101 528 aa12.66□□□□□ -0.38
LRFN3-202ENST00000585876 CXCL8P10145 99 aa12.66□□□□□ -0.38
LRFN3-202ENST00000585876 HARSP12081 509 aaKnown RBP12.66□□□□□ -0.38
LRFN3-202ENST00000585876 DNAJB1P25685 340 aa12.66□□□□□ -0.38
LRFN3-202ENST00000585876 PBX3P40426 434 aa12.66□□□□□ -0.38
LRFN3-202ENST00000585876 STK4Q13043 487 aa12.66□□□□□ -0.38
LRFN3-202ENST00000585876 COL19A1Q14993 1142 aa12.66□□□□□ -0.38
LRFN3-202ENST00000585876 ENOX2Q16206 610 aaKnown RBP12.66□□□□□ -0.38
LRFN3-202ENST00000585876 TIGD5Q53EQ6 642 aa12.66□□□□□ -0.38
LRFN3-202ENST00000585876 ZBTB41Q5SVQ8 909 aa12.66□□□□□ -0.38
LRFN3-202ENST00000585876 PDE12Q6L8Q7 609 aaKnown RBP12.66□□□□□ -0.38
LRFN3-202ENST00000585876 TMEM173Q86WV6 379 aaPredicted RBP12.66□□□□□ -0.38
LRFN3-202ENST00000585876 C12orf56Q8IXR9 622 aa12.66□□□□□ -0.38
LRFN3-202ENST00000585876 BCL7CQ8WUZ0 217 aaPredicted RBP12.66□□□□□ -0.38
LRFN3-202ENST00000585876 FAM193BQ96PV7 902 aaPredicted RBP12.66□□□□□ -0.38
LRFN3-202ENST00000585876 GSDMAQ96QA5 445 aa12.66□□□□□ -0.38
LRFN3-202ENST00000585876 SLC39A2Q9NP94 309 aa12.66□□□□□ -0.38
LRFN3-202ENST00000585876 SLC38A7Q9NVC3 462 aa12.66□□□□□ -0.38
LRFN3-202ENST00000585876 MARCH5Q9NX47 278 aa12.66□□□□□ -0.38
LRFN3-202ENST00000585876 HOOK1Q9UJC3 728 aaKnown RBP12.66□□□□□ -0.38
LRFN3-202ENST00000585876 AGO2Q9UKV8 859 aaKnown RBP12.66□□□□□ -0.38
LRFN3-202ENST00000585876 C5orf42Q9H799 3197 aa12.66□□□□□ -0.38
LRFN3-202ENST00000585876 MTCL1Q9Y4B5 1905 aaKnown RBP12.65□□□□□ -0.38
LRFN3-202ENST00000585876 TMEM189-UBE2V1I3L0A0 370 aa12.65□□□□□ -0.38
LRFN3-202ENST00000585876 NRP1O14786 923 aa12.65□□□□□ -0.38
LRFN3-202ENST00000585876 FSCN2O14926 492 aa12.65□□□□□ -0.38
LRFN3-202ENST00000585876 TGFB1I1O43294 461 aa12.65□□□□□ -0.38
LRFN3-202ENST00000585876 TNFSF9P41273 254 aa12.65□□□□□ -0.38
LRFN3-202ENST00000585876 MATR3P43243 847 aaKnown RBP eCLIP12.65□□□□□ -0.38
LRFN3-202ENST00000585876 OSTNP61366 133 aa12.65□□□□□ -0.38
LRFN3-202ENST00000585876 PNOCQ13519 176 aa12.65□□□□□ -0.38
LRFN3-202ENST00000585876 ZBTB6Q15916 424 aa12.65□□□□□ -0.38
LRFN3-202ENST00000585876 COBLL1Q53SF7 1204 aa12.65□□□□□ -0.38
LRFN3-202ENST00000585876 CRELD2Q6UXH1 353 aaPredicted RBP12.65□□□□□ -0.38
LRFN3-202ENST00000585876 DDX53Q86TM3 631 aaKnown RBP12.65□□□□□ -0.38
LRFN3-202ENST00000585876 CD302Q8IX05 232 aa12.65□□□□□ -0.38
LRFN3-202ENST00000585876 SYCP3Q8IZU3 236 aa12.65□□□□□ -0.38
LRFN3-202ENST00000585876 GOLGA5Q8TBA6 731 aa12.65□□□□□ -0.38
LRFN3-202ENST00000585876 POF1BQ8WVV4 589 aa12.65□□□□□ -0.38
LRFN3-202ENST00000585876 POMGNT1Q8WZA1 660 aa12.65□□□□□ -0.38
LRFN3-202ENST00000585876 CCDC47Q96A33 483 aaKnown RBP12.65□□□□□ -0.38
LRFN3-202ENST00000585876 TMEM169Q96HH4 297 aa12.65□□□□□ -0.38
LRFN3-202ENST00000585876 FBXL18Q96ME1 805 aa12.65□□□□□ -0.38
LRFN3-202ENST00000585876 UROC1Q96N76 676 aa12.65□□□□□ -0.38
LRFN3-202ENST00000585876 ZMAT2Q96NC0 199 aaKnown RBP12.65□□□□□ -0.38
LRFN3-202ENST00000585876 GBP4Q96PP9 640 aa12.65□□□□□ -0.38
LRFN3-202ENST00000585876 VN1R3Q9BXE9 311 aa12.65□□□□□ -0.38
LRFN3-202ENST00000585876 GTPBP4Q9BZE4 634 aaKnown RBP12.65□□□□□ -0.38
LRFN3-202ENST00000585876 ALG13Q9NP73 1137 aaKnown RBP12.65□□□□□ -0.38
LRFN3-202ENST00000585876 TLR9Q9NR96 1032 aa12.65□□□□□ -0.38
LRFN3-202ENST00000585876 AGPAT3Q9NRZ7 376 aa12.65□□□□□ -0.38
LRFN3-202ENST00000585876 RMND1Q9NWS8 449 aa12.65□□□□□ -0.38
LRFN3-202ENST00000585876 DERAQ9Y315 318 aa12.65□□□□□ -0.38
LRFN3-202ENST00000585876 PLXNA3P51805 1871 aa12.64□□□□□ -0.39
LRFN3-202ENST00000585876 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.64□□□□□ -0.39
LRFN3-202ENST00000585876 LDHAP00338 332 aaKnown RBP12.64□□□□□ -0.39
LRFN3-202ENST00000585876 ALDH2P05091 517 aa12.64□□□□□ -0.39
LRFN3-202ENST00000585876 KRT17Q04695 432 aa12.64□□□□□ -0.39
LRFN3-202ENST00000585876 PPP2R3AQ06190 1150 aa12.64□□□□□ -0.39
LRFN3-202ENST00000585876 SOX4Q06945 474 aaPredicted RBP12.64□□□□□ -0.39
LRFN3-202ENST00000585876 HSP90AA2PQ14568 343 aaPredicted RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms