RNA–Protein interactions for RNA: ENST00000585042.5

VAPA-209, Transcript of VAMP associated protein A, humanhuman

TSL 4

Gene VAPA, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-209ENST00000585042 PHLPP2Q6ZVD8 1323 aa16.53■□□□□ 0.24
VAPA-209ENST00000585042 KRBA1A5PL33 1030 aa16.53■□□□□ 0.24
VAPA-209ENST00000585042 CASTOR2A6NHX0 329 aa16.53■□□□□ 0.24
VAPA-209ENST00000585042 TTLL13PA6NNM8 815 aa16.53■□□□□ 0.24
VAPA-209ENST00000585042 TRAPPC3O43617 180 aa16.53■□□□□ 0.24
VAPA-209ENST00000585042 KIF4AO95239 1232 aa16.53■□□□□ 0.24
VAPA-209ENST00000585042 CFHP08603 1231 aa16.53■□□□□ 0.24
VAPA-209ENST00000585042 RPL17P18621 184 aaKnown RBP16.53■□□□□ 0.24
VAPA-209ENST00000585042 FSHRP23945 695 aa16.53■□□□□ 0.24
VAPA-209ENST00000585042 FOSBP53539 338 aa16.53■□□□□ 0.24
VAPA-209ENST00000585042 ST3GAL1Q11201 340 aa16.53■□□□□ 0.24
VAPA-209ENST00000585042 RAB33AQ14088 237 aa16.53■□□□□ 0.24
VAPA-209ENST00000585042 PSMD5Q16401 504 aa16.53■□□□□ 0.24
VAPA-209ENST00000585042 TTC38Q5R3I4 469 aa16.53■□□□□ 0.24
VAPA-209ENST00000585042 LIN9Q5TKA1 542 aa16.53■□□□□ 0.24
VAPA-209ENST00000585042 PRSS55Q6UWB4 352 aaPredicted RBP16.53■□□□□ 0.24
VAPA-209ENST00000585042 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.53■□□□□ 0.24
VAPA-209ENST00000585042 ASCL5Q7RTU5 278 aa16.53■□□□□ 0.24
VAPA-209ENST00000585042 CEP57Q86XR8 500 aa16.53■□□□□ 0.24
VAPA-209ENST00000585042 NOSTRINQ8IVI9 506 aa16.53■□□□□ 0.24
VAPA-209ENST00000585042 GLYCTKQ8IVS8 523 aa16.53■□□□□ 0.24
VAPA-209ENST00000585042 C4orf32Q8N8J7 132 aa16.53■□□□□ 0.24
VAPA-209ENST00000585042 RABGGTAQ92696 567 aa16.53■□□□□ 0.24
VAPA-209ENST00000585042 RAB34Q9BZG1 259 aa16.53■□□□□ 0.24
VAPA-209ENST00000585042 PTPRZ1P23471 2315 aaPredicted RBP16.53■□□□□ 0.24
VAPA-209ENST00000585042 K7ERI5 159 aa16.52■□□□□ 0.24
VAPA-209ENST00000585042 STK25O00506 426 aa16.52■□□□□ 0.24
VAPA-209ENST00000585042 ABCB7O75027 752 aa16.52■□□□□ 0.24
VAPA-209ENST00000585042 XYLBO75191 536 aa16.52■□□□□ 0.24
VAPA-209ENST00000585042 MYBP10242 640 aa16.52■□□□□ 0.24
VAPA-209ENST00000585042 FGFR3P22607 806 aa16.52■□□□□ 0.24
VAPA-209ENST00000585042 CCT6AP40227 531 aaKnown RBP16.52■□□□□ 0.24
VAPA-209ENST00000585042 GUCY1B3Q02153 619 aa16.52■□□□□ 0.24
VAPA-209ENST00000585042 HTR4Q13639 388 aa16.52■□□□□ 0.24
VAPA-209ENST00000585042 ANGPT1Q15389 498 aa16.52■□□□□ 0.24
VAPA-209ENST00000585042 PPM1LQ5SGD2 360 aa16.52■□□□□ 0.24
VAPA-209ENST00000585042 ATF7IP2Q5U623 682 aa16.52■□□□□ 0.24
VAPA-209ENST00000585042 LRWD1Q9UFC0 647 aa16.52■□□□□ 0.24
VAPA-209ENST00000585042 CDH7Q9ULB5 785 aa16.52■□□□□ 0.24
VAPA-209ENST00000585042 NOL7Q9UMY1 257 aaKnown RBP16.52■□□□□ 0.24
VAPA-209ENST00000585042 TNFSF13BQ9Y275 285 aa16.52■□□□□ 0.24
VAPA-209ENST00000585042 CFAP54Q96N23 3096 aa16.52■□□□□ 0.23
VAPA-209ENST00000585042 LAD1O00515 517 aa16.51■□□□□ 0.23
VAPA-209ENST00000585042 U2AF2P26368 475 aaKnown RBP eCLIP16.51■□□□□ 0.232e-7■■■□□ 17.5
VAPA-209ENST00000585042 FOXK2Q01167 660 aa16.51■□□□□ 0.23
VAPA-209ENST00000585042 GNL2Q13823 731 aaKnown RBP16.51■□□□□ 0.23
VAPA-209ENST00000585042 NT5DC1Q5TFE4 455 aa16.51■□□□□ 0.23
VAPA-209ENST00000585042 MTSS1LQ765P7 747 aa16.51■□□□□ 0.23
VAPA-209ENST00000585042 GET4Q7L5D6 327 aaPredicted RBP16.51■□□□□ 0.23
VAPA-209ENST00000585042 GRASPQ7Z6J2 395 aaPredicted RBP16.51■□□□□ 0.23
VAPA-209ENST00000585042 FRMD5Q7Z6J6 570 aa16.51■□□□□ 0.23
VAPA-209ENST00000585042 CCDC83Q8IWF9 413 aa16.51■□□□□ 0.23
VAPA-209ENST00000585042 IGSF22Q8N9C0 903 aa16.51■□□□□ 0.23
VAPA-209ENST00000585042 DDX27Q96GQ7 796 aaKnown RBP16.51■□□□□ 0.23
VAPA-209ENST00000585042 SHDQ96IW2 340 aa16.51■□□□□ 0.23
VAPA-209ENST00000585042 PPP1R10Q96QC0 940 aaKnown RBP16.51■□□□□ 0.23
VAPA-209ENST00000585042 BHMT2Q9H2M3 363 aa16.51■□□□□ 0.23
VAPA-209ENST00000585042 TMEM134Q9H6X4 195 aa16.51■□□□□ 0.23
VAPA-209ENST00000585042 C17orf75Q9HAS0 396 aa16.51■□□□□ 0.23
VAPA-209ENST00000585042 SH2B1Q9NRF2 756 aaPredicted RBP16.51■□□□□ 0.23
VAPA-209ENST00000585042 CACNG4Q9UBN1 327 aa16.51■□□□□ 0.23
VAPA-209ENST00000585042 KCNG1Q9UIX4 513 aa16.51■□□□□ 0.23
VAPA-209ENST00000585042 KCNH3Q9ULD8 1083 aa16.51■□□□□ 0.23
VAPA-209ENST00000585042 SIT1Q9Y3P8 196 aa16.51■□□□□ 0.23
VAPA-209ENST00000585042 RBM19Q9Y4C8 960 aaKnown RBP16.51■□□□□ 0.23
VAPA-209ENST00000585042 BACE2Q9Y5Z0 518 aa16.51■□□□□ 0.23
VAPA-209ENST00000585042 RIF1Q5UIP0 2472 aaKnown RBP16.51■□□□□ 0.23
VAPA-209ENST00000585042 B3GAT3O94766 335 aa16.5■□□□□ 0.23
VAPA-209ENST00000585042 C8AP07357 584 aa16.5■□□□□ 0.23
VAPA-209ENST00000585042 RFX1P22670 979 aa16.5■□□□□ 0.23
VAPA-209ENST00000585042 ECM1Q16610 540 aa16.5■□□□□ 0.23
VAPA-209ENST00000585042 UPP1Q16831 310 aa16.5■□□□□ 0.23
VAPA-209ENST00000585042 XKR4Q5GH76 650 aa16.5■□□□□ 0.23
VAPA-209ENST00000585042 EEF1DP3Q658K8 133 aa16.5■□□□□ 0.23
VAPA-209ENST00000585042 ALKAL1Q6UXT8 129 aa16.5■□□□□ 0.23
VAPA-209ENST00000585042 ANKS3Q6ZW76 656 aa16.5■□□□□ 0.23
VAPA-209ENST00000585042 KCTD17Q8N5Z5 321 aa16.5■□□□□ 0.23
VAPA-209ENST00000585042 FAM184AQ8NB25 1140 aa16.5■□□□□ 0.23
VAPA-209ENST00000585042 GPR152Q8TDT2 470 aa16.5■□□□□ 0.23
VAPA-209ENST00000585042 HASPINQ8TF76 798 aa16.5■□□□□ 0.23
VAPA-209ENST00000585042 BORCS6Q96GS4 357 aa16.5■□□□□ 0.23
VAPA-209ENST00000585042 TBC1D17Q9HA65 648 aa16.5■□□□□ 0.23
VAPA-209ENST00000585042 TOPORSQ9NS56 1045 aaPredicted RBP16.5■□□□□ 0.23
VAPA-209ENST00000585042 MTRRQ9UBK8 725 aa16.5■□□□□ 0.23
VAPA-209ENST00000585042 KIAA1024Q9UPX6 916 aa16.5■□□□□ 0.23
VAPA-209ENST00000585042 DNM3Q9UQ16 869 aa16.5■□□□□ 0.23
VAPA-209ENST00000585042 GDAQ9Y2T3 454 aa16.5■□□□□ 0.23
VAPA-209ENST00000585042 NUMBLQ9Y6R0 609 aa16.5■□□□□ 0.23
VAPA-209ENST00000585042 EDN1P05305 212 aa16.49■□□□□ 0.23
VAPA-209ENST00000585042 LIG1P18858 919 aa16.49■□□□□ 0.23
VAPA-209ENST00000585042 OR1D2P34982 312 aa16.49■□□□□ 0.23
VAPA-209ENST00000585042 GRM5P41594 1212 aa16.49■□□□□ 0.23
VAPA-209ENST00000585042 YARSP54577 528 aaKnown RBP16.49■□□□□ 0.23
VAPA-209ENST00000585042 STARD6P59095 220 aa16.49■□□□□ 0.23
VAPA-209ENST00000585042 CACNB1Q02641 598 aaPredicted RBP16.49■□□□□ 0.23
VAPA-209ENST00000585042 AXDND1Q5T1B0 1012 aaPredicted RBP16.49■□□□□ 0.23
VAPA-209ENST00000585042 ACO2Q99798 780 aaKnown RBP16.49■□□□□ 0.23
VAPA-209ENST00000585042 NTPCRQ9BSD7 190 aaKnown RBP16.49■□□□□ 0.23
VAPA-209ENST00000585042 TIPINQ9BVW5 301 aa16.49■□□□□ 0.23
VAPA-209ENST00000585042 CCDC94Q9BW85 323 aaPredicted RBP16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms