RNA–Protein interactions for RNA: ENST00000584796.5

VAPA-208, Transcript of VAMP associated protein A, human

TSL 3

Gene VAPA, Length 654 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VAPA-208	ENST00000584796	MST1L	Q2TV78	715 aa		4.13	□□□□□ -1.75
VAPA-208	ENST00000584796	DALRD3	Q5D0E6	543 aa	Known RBP	4.13	□□□□□ -1.75
VAPA-208	ENST00000584796	PRAMEF14	Q5SWL7	426 aa		4.13	□□□□□ -1.75
VAPA-208	ENST00000584796	AGAP9	Q5VTM2	703 aa		4.13	□□□□□ -1.75
VAPA-208	ENST00000584796	RD3	Q7Z3Z2	195 aa		4.13	□□□□□ -1.75
VAPA-208	ENST00000584796	ZFP28	Q8NHY6	868 aa		4.13	□□□□□ -1.75
VAPA-208	ENST00000584796	ASB10	Q8WXI3	467 aa		4.13	□□□□□ -1.75
VAPA-208	ENST00000584796	CAVIN3	Q969G5	261 aa		4.13	□□□□□ -1.75
VAPA-208	ENST00000584796	MFSD3	Q96ES6	412 aa		4.13	□□□□□ -1.75
VAPA-208	ENST00000584796	FEZ1	Q99689	392 aa		4.13	□□□□□ -1.75
VAPA-208	ENST00000584796	POGK	Q9P215	609 aa		4.13	□□□□□ -1.75
VAPA-208	ENST00000584796	USP15	Q9Y4E8	981 aa	Predicted RBP	4.13	□□□□□ -1.75
VAPA-208	ENST00000584796	INSL6	Q9Y581	213 aa		4.13	□□□□□ -1.75
VAPA-208	ENST00000584796	ADAMTS12	P58397	1594 aa		4.13	□□□□□ -1.75
VAPA-208	ENST00000584796	DRGX	A6NNA5	263 aa		4.12	□□□□□ -1.75
VAPA-208	ENST00000584796	RAB11FIP3	O75154	756 aa		4.12	□□□□□ -1.75
VAPA-208	ENST00000584796	ESRRB	O95718	433 aa		4.12	□□□□□ -1.75
VAPA-208	ENST00000584796	CFI	P05156	583 aa		4.12	□□□□□ -1.75
VAPA-208	ENST00000584796	LPL	P06858	475 aa		4.12	□□□□□ -1.75
VAPA-208	ENST00000584796	ZNF37A	P17032	561 aa	Predicted RBP	4.12	□□□□□ -1.75
VAPA-208	ENST00000584796	LGALS4	P56470	323 aa		4.12	□□□□□ -1.75
VAPA-208	ENST00000584796	REST	Q13127	1097 aa		4.12	□□□□□ -1.75
VAPA-208	ENST00000584796	PDCD1	Q15116	288 aa		4.12	□□□□□ -1.75
VAPA-208	ENST00000584796	ZKSCAN2	Q63HK3	967 aa		4.12	□□□□□ -1.75
VAPA-208	ENST00000584796	FBXO42	Q6P3S6	717 aa		4.12	□□□□□ -1.75
VAPA-208	ENST00000584796	RHOT2	Q8IXI1	618 aa		4.12	□□□□□ -1.75
VAPA-208	ENST00000584796	FAM98A	Q8NCA5	519 aa	Known RBP	4.12	□□□□□ -1.75
VAPA-208	ENST00000584796	SLC35B2	Q8TB61	432 aa		4.12	□□□□□ -1.75
VAPA-208	ENST00000584796	MAP3K2	Q9Y2U5	619 aa		4.12	□□□□□ -1.75
VAPA-208	ENST00000584796	POLR2A	P24928	1970 aa	Known RBP	4.12	□□□□□ -1.75
VAPA-208	ENST00000584796	MAST3	O60307	1309 aa		4.12	□□□□□ -1.75
VAPA-208	ENST00000584796	RPTOR	Q8N122	1335 aa		4.12	□□□□□ -1.75
VAPA-208	ENST00000584796	SOGA1	O94964	1423 aa		4.12	□□□□□ -1.75
VAPA-208	ENST00000584796	CXorf49	A8MYA2	514 aa	Predicted RBP	4.11	□□□□□ -1.75
VAPA-208	ENST00000584796	ADCY6	O43306	1168 aa		4.11	□□□□□ -1.75
VAPA-208	ENST00000584796	PHF2	O75151	1096 aa		4.11	□□□□□ -1.75
VAPA-208	ENST00000584796	CDC45	O75419	566 aa		4.11	□□□□□ -1.75
VAPA-208	ENST00000584796	CDKL5	O76039	1030 aa		4.11	□□□□□ -1.75
VAPA-208	ENST00000584796	BPI	P17213	487 aa		4.11	□□□□□ -1.75
VAPA-208	ENST00000584796	MPL	P40238	635 aa		4.11	□□□□□ -1.75
VAPA-208	ENST00000584796	CHN2	P52757	468 aa		4.11	□□□□□ -1.75
VAPA-208	ENST00000584796	CLRN1	P58418	232 aa		4.11	□□□□□ -1.75
VAPA-208	ENST00000584796	FSCN1	Q16658	493 aa	Known RBP	4.11	□□□□□ -1.75
VAPA-208	ENST00000584796	ERCC6L	Q2NKX8	1250 aa		4.11	□□□□□ -1.75
VAPA-208	ENST00000584796	CT83	Q5H943	113 aa		4.11	□□□□□ -1.75
VAPA-208	ENST00000584796	FAM47A	Q5JRC9	791 aa		4.11	□□□□□ -1.75
VAPA-208	ENST00000584796	ZNF572	Q7Z3I7	529 aa	Predicted RBP	4.11	□□□□□ -1.75
VAPA-208	ENST00000584796	KIAA0907	Q7Z7F0	614 aa	Predicted RBP	4.11	□□□□□ -1.75
VAPA-208	ENST00000584796	SIMC1	Q8NDZ2	872 aa		4.11	□□□□□ -1.75
VAPA-208	ENST00000584796	SLC9A6	Q92581	669 aa		4.11	□□□□□ -1.75
VAPA-208	ENST00000584796	FUBP1	Q96AE4	644 aa	Known RBP	4.11	□□□□□ -1.75
VAPA-208	ENST00000584796	DRC1	Q96MC2	740 aa		4.11	□□□□□ -1.75
VAPA-208	ENST00000584796	NOC2L	Q9Y3T9	749 aa	Known RBP	4.11	□□□□□ -1.75
VAPA-208	ENST00000584796	SPATA31A6	Q5VVP1	1343 aa		4.11	□□□□□ -1.75
VAPA-208	ENST00000584796	ATRNL1	Q5VV63	1379 aa		4.11	□□□□□ -1.75
VAPA-208	ENST00000584796	GRIN2B	Q13224	1484 aa		4.11	□□□□□ -1.75
VAPA-208	ENST00000584796	ARHGEF17	Q96PE2	2063 aa	Predicted RBP	4.1	□□□□□ -1.75
VAPA-208	ENST00000584796		A0A087X0B3	334 aa		4.1	□□□□□ -1.75
VAPA-208	ENST00000584796	FOS	P01100	380 aa	Predicted RBP	4.1	□□□□□ -1.75
VAPA-208	ENST00000584796	ELANE	P08246	267 aa		4.1	□□□□□ -1.75
VAPA-208	ENST00000584796	CXCR5	P32302	372 aa		4.1	□□□□□ -1.75
VAPA-208	ENST00000584796	MXRA7	P84157	204 aa		4.1	□□□□□ -1.75
VAPA-208	ENST00000584796	MPP3	Q13368	585 aa		4.1	□□□□□ -1.75
VAPA-208	ENST00000584796	ATP13A4	Q4VNC1	1196 aa		4.1	□□□□□ -1.75
VAPA-208	ENST00000584796	ATXN7L2	Q5T6C5	722 aa	Predicted RBP	4.1	□□□□□ -1.75
VAPA-208	ENST00000584796	TRMT2A	Q8IZ69	625 aa	Known RBP	4.1	□□□□□ -1.75
VAPA-208	ENST00000584796	OR56A1	Q8NGH5	318 aa		4.1	□□□□□ -1.75
VAPA-208	ENST00000584796	EAF2	Q96CJ1	260 aa	Predicted RBP	4.1	□□□□□ -1.75
VAPA-208	ENST00000584796	TOPORS	Q9NS56	1045 aa	Predicted RBP	4.1	□□□□□ -1.75
VAPA-208	ENST00000584796	KLHL11	Q9NVR0	708 aa		4.1	□□□□□ -1.75
VAPA-208	ENST00000584796	ATP11B	Q9Y2G3	1177 aa		4.1	□□□□□ -1.75
VAPA-208	ENST00000584796	ABCC8	Q09428	1581 aa		4.1	□□□□□ -1.75
VAPA-208	ENST00000584796	INO80B-WBP1	J3KQ70	363 aa		4.09	□□□□□ -1.75
VAPA-208	ENST00000584796	WNT10B	O00744	389 aa		4.09	□□□□□ -1.75
VAPA-208	ENST00000584796	SNRPA1	P09661	255 aa	Known RBP	4.09	□□□□□ -1.75
VAPA-208	ENST00000584796	ITGAM	P11215	1152 aa		4.09	□□□□□ -1.75
VAPA-208	ENST00000584796	ALOX15	P16050	662 aa	Predicted RBP	4.09	□□□□□ -1.75
VAPA-208	ENST00000584796	ENPP1	P22413	925 aa		4.09	□□□□□ -1.75
VAPA-208	ENST00000584796	FDXR	P22570	491 aa		4.09	□□□□□ -1.75
VAPA-208	ENST00000584796	CANX	P27824	592 aa	Known RBP	4.09	□□□□□ -1.75
VAPA-208	ENST00000584796	DHCR24	Q15392	516 aa		4.09	□□□□□ -1.75
VAPA-208	ENST00000584796	UGT8	Q16880	541 aa		4.09	□□□□□ -1.75
VAPA-208	ENST00000584796	CPEB4	Q17RY0	729 aa	Known RBP eCLIP	4.09	□□□□□ -1.75	2e-8	■■■■■ 27
VAPA-208	ENST00000584796	B3GNTL1	Q67FW5	361 aa	Predicted RBP	4.09	□□□□□ -1.75
VAPA-208	ENST00000584796		Q6ZVL8	140 aa		4.09	□□□□□ -1.75
VAPA-208	ENST00000584796	MAPKAPK5	Q8IW41	473 aa		4.09	□□□□□ -1.75
VAPA-208	ENST00000584796	TMEM132C	Q8N3T6	1108 aa		4.09	□□□□□ -1.75
VAPA-208	ENST00000584796	REPS2	Q8NFH8	660 aa		4.09	□□□□□ -1.75
VAPA-208	ENST00000584796	OR7D4	Q8NG98	312 aa		4.09	□□□□□ -1.75
VAPA-208	ENST00000584796	NELL1	Q92832	810 aa		4.09	□□□□□ -1.75
VAPA-208	ENST00000584796	RAX2	Q96IS3	184 aa		4.09	□□□□□ -1.75
VAPA-208	ENST00000584796	ACAP3	Q96P50	834 aa		4.09	□□□□□ -1.75
VAPA-208	ENST00000584796	LRFN3	Q9BTN0	628 aa		4.09	□□□□□ -1.75
VAPA-208	ENST00000584796	INO80B	Q9C086	356 aa	Predicted RBP	4.09	□□□□□ -1.75
VAPA-208	ENST00000584796	BCO1	Q9HAY6	547 aa		4.09	□□□□□ -1.75
VAPA-208	ENST00000584796	RNF181	Q9P0P0	153 aa		4.09	□□□□□ -1.75
VAPA-208	ENST00000584796	PNPLA7	Q6ZV29	1317 aa		4.09	□□□□□ -1.75
VAPA-208	ENST00000584796	GRIN2A	Q12879	1464 aa		4.09	□□□□□ -1.75
VAPA-208	ENST00000584796	ABCC10	Q5T3U5	1492 aa		4.09	□□□□□ -1.75
VAPA-208	ENST00000584796	RUSC2	Q8N2Y8	1516 aa		4.09	□□□□□ -1.75

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