RNA–Protein interactions for RNA: ENST00000584755.1

UBBP4-202, Transcript of ubiquitin B pseudogene 4, humanhuman

TSL 1 (best) BASIC

Gene UBBP4, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-202ENST00000584755 CEP120Q8N960 986 aa15.14■□□□□ 0.01
UBBP4-202ENST00000584755 ARRDC4Q8NCT1 418 aa15.14■□□□□ 0.01
UBBP4-202ENST00000584755 TAS1R2Q8TE23 839 aa15.14■□□□□ 0.01
UBBP4-202ENST00000584755 SH3TC2Q8TF17 1288 aa15.14■□□□□ 0.01
UBBP4-202ENST00000584755 SEMA4DQ92854 862 aa15.14■□□□□ 0.01
UBBP4-202ENST00000584755 WNT8BQ93098 351 aa15.14■□□□□ 0.01
UBBP4-202ENST00000584755 VTI1AQ96AJ9 217 aa15.14■□□□□ 0.01
UBBP4-202ENST00000584755 PAK6Q9NQU5 681 aaPredicted RBP15.14■□□□□ 0.01
UBBP4-202ENST00000584755 RAB20Q9NX57 234 aa15.14■□□□□ 0.01
UBBP4-202ENST00000584755 ARHGAP20Q9P2F6 1191 aa15.14■□□□□ 0.01
UBBP4-202ENST00000584755 ADGRG1Q9Y653 693 aa15.14■□□□□ 0.01
UBBP4-202ENST00000584755 EPN1Q9Y6I3 576 aaPredicted RBP15.14■□□□□ 0.01
UBBP4-202ENST00000584755 SSU72P8A0A1W2PR75 194 aa15.13■□□□□ 0.01
UBBP4-202ENST00000584755 USP27XA6NNY8 438 aa15.13■□□□□ 0.01
UBBP4-202ENST00000584755 LRRN2O75325 713 aa15.13■□□□□ 0.01
UBBP4-202ENST00000584755 IL18RAPO95256 599 aa15.13■□□□□ 0.01
UBBP4-202ENST00000584755 STAG3L1P0CL83 205 aa15.13■□□□□ 0.01
UBBP4-202ENST00000584755 TNNI1P19237 187 aa15.13■□□□□ 0.01
UBBP4-202ENST00000584755 FGFR4P22455 802 aa15.13■□□□□ 0.01
UBBP4-202ENST00000584755 PRKCIP41743 596 aa15.13■□□□□ 0.01
UBBP4-202ENST00000584755 MGAT3Q09327 533 aa15.13■□□□□ 0.01
UBBP4-202ENST00000584755 NOTUMQ6P988 496 aa15.13■□□□□ 0.01
UBBP4-202ENST00000584755 GJB7Q6PEY0 223 aa15.13■□□□□ 0.01
UBBP4-202ENST00000584755 IRF2BP2Q7Z5L9 587 aa15.13■□□□□ 0.01
UBBP4-202ENST00000584755 APBB1IPQ7Z5R6 666 aaPredicted RBP15.13■□□□□ 0.01
UBBP4-202ENST00000584755 SPAG5Q96R06 1193 aa15.13■□□□□ 0.01
UBBP4-202ENST00000584755 ADPGKQ9BRR6 497 aa15.13■□□□□ 0.01
UBBP4-202ENST00000584755 GPR88Q9GZN0 384 aa15.13■□□□□ 0.01
UBBP4-202ENST00000584755 NHEJ1Q9H9Q4 299 aaPredicted RBP15.13■□□□□ 0.01
UBBP4-202ENST00000584755 DNAJC12Q9UKB3 198 aa15.13■□□□□ 0.01
UBBP4-202ENST00000584755 PHF24Q9UPV7 400 aa15.13■□□□□ 0.01
UBBP4-202ENST00000584755 GINS2Q9Y248 185 aa15.13■□□□□ 0.01
UBBP4-202ENST00000584755 PPP2R2CQ9Y2T4 447 aa15.13■□□□□ 0.01
UBBP4-202ENST00000584755 TRPV2Q9Y5S1 764 aa15.13■□□□□ 0.01
UBBP4-202ENST00000584755 F8VZ95 297 aa15.12■□□□□ 0.01
UBBP4-202ENST00000584755 MEFVO15553 781 aaPredicted RBP15.12■□□□□ 0.01
UBBP4-202ENST00000584755 ZSCAN12O43309 604 aa15.12■□□□□ 0.01
UBBP4-202ENST00000584755 NDUFA10O95299 355 aa15.12■□□□□ 0.01
UBBP4-202ENST00000584755 LCA5LO95447 670 aa15.12■□□□□ 0.01
UBBP4-202ENST00000584755 VNN1O95497 513 aa15.12■□□□□ 0.01
UBBP4-202ENST00000584755 MYCNP04198 464 aaPredicted RBP15.12■□□□□ 0.01
UBBP4-202ENST00000584755 SERPING1P05155 500 aa15.12■□□□□ 0.01
UBBP4-202ENST00000584755 GRM5P41594 1212 aa15.12■□□□□ 0.01
UBBP4-202ENST00000584755 PTK7Q13308 1070 aa15.12■□□□□ 0.01
UBBP4-202ENST00000584755 RAPGEF1Q13905 1077 aa15.12■□□□□ 0.01
UBBP4-202ENST00000584755 PTGISQ16647 500 aa15.12■□□□□ 0.01
UBBP4-202ENST00000584755 ASTE1Q2TB18 679 aaPredicted RBP15.12■□□□□ 0.01
UBBP4-202ENST00000584755 SLC9C1Q4G0N8 1177 aa15.12■□□□□ 0.01
UBBP4-202ENST00000584755 SLC27A1Q6PCB7 646 aa15.12■□□□□ 0.01
UBBP4-202ENST00000584755 FMNL3Q8IVF7 1028 aa15.12■□□□□ 0.01
UBBP4-202ENST00000584755 ARHGEF19Q8IW93 802 aa15.12■□□□□ 0.01
UBBP4-202ENST00000584755 REXO1L1PQ8IX06 675 aa15.12■□□□□ 0.01
UBBP4-202ENST00000584755 TMEM192Q8IY95 271 aa15.12■□□□□ 0.01
UBBP4-202ENST00000584755 OR5B17Q8NGF7 314 aa15.12■□□□□ 0.01
UBBP4-202ENST00000584755 PPP1R13BQ96KQ4 1090 aa15.12■□□□□ 0.01
UBBP4-202ENST00000584755 GLT1D1Q96MS3 346 aa15.12■□□□□ 0.01
UBBP4-202ENST00000584755 SENP6Q9GZR1 1112 aaPredicted RBP15.12■□□□□ 0.01
UBBP4-202ENST00000584755 RPF1Q9H9Y2 349 aaKnown RBP15.12■□□□□ 0.01
UBBP4-202ENST00000584755 CDY2AQ9Y6F7 541 aa15.12■□□□□ 0.01
UBBP4-202ENST00000584755 A0A1W2PQ45 241 aaPredicted RBP15.11■□□□□ 0.01
UBBP4-202ENST00000584755 A0A1W2PQY0 241 aa15.11■□□□□ 0.01
UBBP4-202ENST00000584755 EIF3CLB5ME19 914 aaKnown RBP15.11■□□□□ 0.01
UBBP4-202ENST00000584755 HLA-DRAP01903 254 aa15.11■□□□□ 0.01
UBBP4-202ENST00000584755 CCDC175P0C221 793 aa15.11■□□□□ 0.01
UBBP4-202ENST00000584755 CYLC1P35663 651 aaPredicted RBP15.11■□□□□ 0.01
UBBP4-202ENST00000584755 STAT1P42224 750 aa15.11■□□□□ 0.01
UBBP4-202ENST00000584755 DRAP1Q14919 205 aaPredicted RBP15.11■□□□□ 0.01
UBBP4-202ENST00000584755 ASIC2Q16515 512 aa15.11■□□□□ 0.01
UBBP4-202ENST00000584755 TRIM71Q2Q1W2 868 aaKnown RBP15.11■□□□□ 0.01
UBBP4-202ENST00000584755 LMBRD2Q68DH5 695 aaPredicted RBP15.11■□□□□ 0.01
UBBP4-202ENST00000584755 FAM228AQ86W67 206 aa15.11■□□□□ 0.01
UBBP4-202ENST00000584755 HELQQ8TDG4 1101 aa15.11■□□□□ 0.01
UBBP4-202ENST00000584755 EIF3CQ99613 913 aaKnown RBP15.11■□□□□ 0.01
UBBP4-202ENST00000584755 SEZ6LQ9BYH1 1024 aa15.11■□□□□ 0.01
UBBP4-202ENST00000584755 UNC93B1Q9H1C4 597 aa15.11■□□□□ 0.01
UBBP4-202ENST00000584755 ASB7Q9H672 318 aa15.11■□□□□ 0.01
UBBP4-202ENST00000584755 BZW2Q9Y6E2 419 aaKnown RBP15.11■□□□□ 0.01
UBBP4-202ENST00000584755 MROH7Q68CQ1 1323 aa15.11■□□□□ 0.01
UBBP4-202ENST00000584755 M0QZ92 97 aa15.1■□□□□ 0.01
UBBP4-202ENST00000584755 CAND2O75155 1236 aa15.1■□□□□ 0.01
UBBP4-202ENST00000584755 CHRNA1P02708 482 aa15.1■□□□□ 0.01
UBBP4-202ENST00000584755 PLEKP08567 350 aaPredicted RBP15.1■□□□□ 0.01
UBBP4-202ENST00000584755 CXCL8P10145 99 aa15.1■□□□□ 0.01
UBBP4-202ENST00000584755 FERP16591 822 aa15.1■□□□□ 0.01
UBBP4-202ENST00000584755 ANXA13P27216 316 aa15.1■□□□□ 0.01
UBBP4-202ENST00000584755 SOX5P35711 763 aa15.1■□□□□ 0.01
UBBP4-202ENST00000584755 EIF4A3P38919 411 aaKnown RBP15.1■□□□□ 0.01
UBBP4-202ENST00000584755 GCNT1Q02742 428 aa15.1■□□□□ 0.01
UBBP4-202ENST00000584755 DUOXA2Q1HG44 320 aa15.1■□□□□ 0.01
UBBP4-202ENST00000584755 SLC10A6Q3KNW5 377 aa15.1■□□□□ 0.01
UBBP4-202ENST00000584755 FAM26DQ5JW98 314 aa15.1■□□□□ 0.01
UBBP4-202ENST00000584755 SMYD5Q6GMV2 418 aa15.1■□□□□ 0.01
UBBP4-202ENST00000584755 NYAP1Q6ZVC0 841 aa15.1■□□□□ 0.01
UBBP4-202ENST00000584755 EFCAB13Q8IY85 973 aa15.1■□□□□ 0.01
UBBP4-202ENST00000584755 DHX38Q92620 1227 aaKnown RBP15.1■□□□□ 0.01
UBBP4-202ENST00000584755 FAM84AQ96KN4 292 aa15.1■□□□□ 0.01
UBBP4-202ENST00000584755 FAM81BQ96LP2 452 aa15.1■□□□□ 0.01
UBBP4-202ENST00000584755 KREMEN1Q96MU8 473 aa15.1■□□□□ 0.01
UBBP4-202ENST00000584755 NT5C1BQ96P26 610 aa15.1■□□□□ 0.01
UBBP4-202ENST00000584755 DESI2Q9BSY9 194 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms