RNA–Protein interactions for RNA: ENST00000584655.5

RFFL-212, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene RFFL, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-212ENST00000584655 TRPA1O75762 1119 aa11.05□□□□□ -0.64
RFFL-212ENST00000584655 NPTXRO95502 500 aa11.05□□□□□ -0.64
RFFL-212ENST00000584655 PPFIA1Q13136 1202 aa11.05□□□□□ -0.64
RFFL-212ENST00000584655 ORC2Q13416 577 aaPredicted RBP11.05□□□□□ -0.64
RFFL-212ENST00000584655 NCOA4Q13772 614 aa11.05□□□□□ -0.64
RFFL-212ENST00000584655 EHBP1Q8NDI1 1231 aa11.05□□□□□ -0.64
RFFL-212ENST00000584655 MCPH1Q8NEM0 835 aa11.05□□□□□ -0.64
RFFL-212ENST00000584655 HAPLN2Q9GZV7 340 aa11.05□□□□□ -0.64
RFFL-212ENST00000584655 ANKZF1Q9H8Y5 726 aa11.05□□□□□ -0.64
RFFL-212ENST00000584655 SNX24Q9Y343 169 aa11.05□□□□□ -0.64
RFFL-212ENST00000584655 SPDYE5A6NIY4 337 aa11.04□□□□□ -0.64
RFFL-212ENST00000584655 ITGB3P05106 788 aa11.04□□□□□ -0.64
RFFL-212ENST00000584655 GUCY2CP25092 1073 aa11.04□□□□□ -0.64
RFFL-212ENST00000584655 CC2D1AQ6P1N0 951 aaPredicted RBP11.04□□□□□ -0.64
RFFL-212ENST00000584655 EPM2AIP1Q7L775 607 aaPredicted RBP11.04□□□□□ -0.64
RFFL-212ENST00000584655 CCDC170Q8IYT3 715 aa11.04□□□□□ -0.64
RFFL-212ENST00000584655 ZNF516Q92618 1163 aa11.04□□□□□ -0.64
RFFL-212ENST00000584655 CDHR1Q96JP9 859 aa11.04□□□□□ -0.64
RFFL-212ENST00000584655 PWWP2AQ96N64 755 aa11.04□□□□□ -0.64
RFFL-212ENST00000584655 NUP85Q9BW27 656 aa11.04□□□□□ -0.64
RFFL-212ENST00000584655 FAN1Q9Y2M0 1017 aa11.04□□□□□ -0.64
RFFL-212ENST00000584655 SYNGAP1Q96PV0 1343 aa11.04□□□□□ -0.64
RFFL-212ENST00000584655 GOLGA8MH3BSY2 632 aa11.04□□□□□ -0.64
RFFL-212ENST00000584655 ATP2C2O75185 946 aa11.04□□□□□ -0.64
RFFL-212ENST00000584655 RRM1P23921 792 aa11.04□□□□□ -0.64
RFFL-212ENST00000584655 ATP11AP98196 1134 aa11.04□□□□□ -0.64
RFFL-212ENST00000584655 MCTP2Q6DN12 878 aa11.04□□□□□ -0.64
RFFL-212ENST00000584655 TAS1R3Q7RTX0 852 aa11.04□□□□□ -0.64
RFFL-212ENST00000584655 L2HGDHQ9H9P8 463 aa11.04□□□□□ -0.64
RFFL-212ENST00000584655 SNX12Q9UMY4 172 aa11.04□□□□□ -0.64
RFFL-212ENST00000584655 TCRBV7S2A1N4TA0A589 114 aa11.04□□□□□ -0.64
RFFL-212ENST00000584655 LACTBP83111 547 aaPredicted RBP11.04□□□□□ -0.64
RFFL-212ENST00000584655 TDRD10Q5VZ19 366 aaKnown RBP11.04□□□□□ -0.64
RFFL-212ENST00000584655 FASTKD5Q7L8L6 764 aaKnown RBP11.04□□□□□ -0.64
RFFL-212ENST00000584655 C12orf29Q8N999 325 aa11.04□□□□□ -0.64
RFFL-212ENST00000584655 NPLOC4Q8TAT6 608 aa11.04□□□□□ -0.64
RFFL-212ENST00000584655 KIFAP3Q92845 792 aa11.04□□□□□ -0.64
RFFL-212ENST00000584655 AGPAT1Q99943 283 aa11.04□□□□□ -0.64
RFFL-212ENST00000584655 SIX2Q9NPC8 291 aa11.04□□□□□ -0.64
RFFL-212ENST00000584655 PIN4Q9Y237 131 aaKnown RBP11.04□□□□□ -0.64
RFFL-212ENST00000584655 DOCK3Q8IZD9 2030 aa11.03□□□□□ -0.64
RFFL-212ENST00000584655 TTI1O43156 1089 aa11.03□□□□□ -0.64
RFFL-212ENST00000584655 AOC2O75106 756 aa11.03□□□□□ -0.64
RFFL-212ENST00000584655 FAM153BP0C7A2 387 aa11.03□□□□□ -0.64
RFFL-212ENST00000584655 KRT10P13645 584 aa11.03□□□□□ -0.64
RFFL-212ENST00000584655 YARSP54577 528 aaKnown RBP11.03□□□□□ -0.64
RFFL-212ENST00000584655 PLTPP55058 493 aa11.03□□□□□ -0.64
RFFL-212ENST00000584655 NOP14P78316 857 aaKnown RBP11.03□□□□□ -0.64
RFFL-212ENST00000584655 FAM153CQ494X1 144 aa11.03□□□□□ -0.64
RFFL-212ENST00000584655 GPR142Q7Z601 462 aa11.03□□□□□ -0.64
RFFL-212ENST00000584655 FAM153AQ9UHL3 310 aa11.03□□□□□ -0.64
RFFL-212ENST00000584655 AGAP1Q9UPQ3 857 aa11.03□□□□□ -0.64
RFFL-212ENST00000584655 JRKLQ9Y4A0 524 aa11.03□□□□□ -0.64
RFFL-212ENST00000584655 NUB1Q9Y5A7 615 aa11.03□□□□□ -0.64
RFFL-212ENST00000584655 GLI1P08151 1106 aa11.03□□□□□ -0.64
RFFL-212ENST00000584655 IQCF3P0C7M6 154 aa11.03□□□□□ -0.64
RFFL-212ENST00000584655 GTF2H1P32780 548 aa11.03□□□□□ -0.64
RFFL-212ENST00000584655 NT5C2P49902 561 aa11.03□□□□□ -0.64
RFFL-212ENST00000584655 FAM117BQ6P1L5 589 aa11.03□□□□□ -0.64
RFFL-212ENST00000584655 METTL7BQ6UX53 244 aa11.03□□□□□ -0.64
RFFL-212ENST00000584655 RIOX2Q8IUF8 465 aa11.03□□□□□ -0.64
RFFL-212ENST00000584655 CCDC105Q8IYK2 499 aa11.03□□□□□ -0.64
RFFL-212ENST00000584655 CHST13Q8NET6 341 aa11.03□□□□□ -0.64
RFFL-212ENST00000584655 HEXIM2Q96MH2 286 aaKnown RBP11.03□□□□□ -0.64
RFFL-212ENST00000584655 MLXIPLQ9NP71 852 aa11.03□□□□□ -0.64
RFFL-212ENST00000584655 AMFRQ9UKV5 643 aa11.03□□□□□ -0.64
RFFL-212ENST00000584655 FOXO6A8MYZ6 492 aa11.03□□□□□ -0.64
RFFL-212ENST00000584655 NFICP08651 508 aa11.03□□□□□ -0.64
RFFL-212ENST00000584655 CA8P35219 290 aa11.03□□□□□ -0.64
RFFL-212ENST00000584655 GGCXP38435 758 aa11.03□□□□□ -0.64
RFFL-212ENST00000584655 BMS1Q14692 1282 aaKnown RBP11.03□□□□□ -0.64
RFFL-212ENST00000584655 CFAP221Q4G0U5 840 aa11.03□□□□□ -0.64
RFFL-212ENST00000584655 PPP4R3CPQ6ZMV5 832 aa11.03□□□□□ -0.64
RFFL-212ENST00000584655 GSTA5Q7RTV2 222 aa11.03□□□□□ -0.64
RFFL-212ENST00000584655 CTU1Q7Z7A3 348 aaKnown RBP11.03□□□□□ -0.64
RFFL-212ENST00000584655 C1orf131Q8NDD1 294 aaKnown RBP11.03□□□□□ -0.64
RFFL-212ENST00000584655 STKLD1Q8NE28 680 aa11.03□□□□□ -0.64
RFFL-212ENST00000584655 NDRG1Q92597 394 aaKnown RBP11.03□□□□□ -0.64
RFFL-212ENST00000584655 SNX9Q9Y5X1 595 aa11.03□□□□□ -0.64
RFFL-212ENST00000584655 IGF2BP3O00425 579 aaKnown RBP eCLIP11.02□□□□□ -0.64
RFFL-212ENST00000584655 DAPK3O43293 454 aa11.02□□□□□ -0.64
RFFL-212ENST00000584655 KRT14P02533 472 aa11.02□□□□□ -0.64
RFFL-212ENST00000584655 LGALS2P05162 132 aa11.02□□□□□ -0.64
RFFL-212ENST00000584655 COMTP21964 271 aa11.02□□□□□ -0.64
RFFL-212ENST00000584655 ACAT1P24752 427 aaKnown RBP11.02□□□□□ -0.64
RFFL-212ENST00000584655 CTNNA2P26232 953 aa11.02□□□□□ -0.64
RFFL-212ENST00000584655 GNA15P30679 374 aa11.02□□□□□ -0.64
RFFL-212ENST00000584655 NSFP46459 744 aaKnown RBP11.02□□□□□ -0.64
RFFL-212ENST00000584655 MFAP3P55082 362 aa11.02□□□□□ -0.64
RFFL-212ENST00000584655 CCNA1P78396 465 aa11.02□□□□□ -0.64
RFFL-212ENST00000584655 CYP24A1Q07973 514 aa11.02□□□□□ -0.64
RFFL-212ENST00000584655 TWF2Q6IBS0 349 aaKnown RBP11.02□□□□□ -0.64
RFFL-212ENST00000584655 LPPQ93052 612 aa11.02□□□□□ -0.64
RFFL-212ENST00000584655 GPR20Q99678 358 aa11.02□□□□□ -0.64
RFFL-212ENST00000584655 ZNF112Q9UJU3 913 aa11.02□□□□□ -0.64
RFFL-212ENST00000584655 COG5Q9UP83 839 aa11.02□□□□□ -0.64
RFFL-212ENST00000584655 CCDC66A2RUB6 948 aa11.02□□□□□ -0.65
RFFL-212ENST00000584655 ADCY6O43306 1168 aa11.02□□□□□ -0.65
RFFL-212ENST00000584655 ERLIN1O75477 346 aa11.02□□□□□ -0.65
RFFL-212ENST00000584655 FERP16591 822 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms