RNA–Protein interactions for RNA: ENST00000584437.5

RNF43-208, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 5,575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-208ENST00000584437 PMS1P54277 932 aaKnown RBP13.76□□□□□ -0.21
RNF43-208ENST00000584437 USP17L24Q0WX57 530 aa13.76□□□□□ -0.21
RNF43-208ENST00000584437 GRAPQ13588 217 aa13.76□□□□□ -0.21
RNF43-208ENST00000584437 USP17L6PQ6QN14 398 aa13.76□□□□□ -0.21
RNF43-208ENST00000584437 PLD3Q8IV08 490 aa13.76□□□□□ -0.21
RNF43-208ENST00000584437 GRAPLQ8TC17 118 aaPredicted RBP13.76□□□□□ -0.21
RNF43-208ENST00000584437 SH3RF3Q8TEJ3 882 aaPredicted RBP13.76□□□□□ -0.21
RNF43-208ENST00000584437 LZICQ8WZA0 190 aa13.76□□□□□ -0.21
RNF43-208ENST00000584437 APEX2Q9UBZ4 518 aa13.76□□□□□ -0.21
RNF43-208ENST00000584437 USP42Q9H9J4 1324 aaKnown RBP13.75□□□□□ -0.21
RNF43-208ENST00000584437 MYO1DO94832 1006 aa13.75□□□□□ -0.21
RNF43-208ENST00000584437 GFAPP14136 432 aa13.75□□□□□ -0.21
RNF43-208ENST00000584437 STAT3P40763 770 aa13.75□□□□□ -0.21
RNF43-208ENST00000584437 ITIH4Q14624 930 aa13.75□□□□□ -0.21
RNF43-208ENST00000584437 ZNF568Q3ZCX4 644 aa13.75□□□□□ -0.21
RNF43-208ENST00000584437 SUPT20HL1Q3ZLR7 823 aa13.75□□□□□ -0.21
RNF43-208ENST00000584437 COL23A1Q86Y22 540 aaPredicted RBP13.75□□□□□ -0.21
RNF43-208ENST00000584437 NOA1Q8NC60 698 aaKnown RBP13.75□□□□□ -0.21
RNF43-208ENST00000584437 DCP1AQ9NPI6 582 aaPredicted RBP13.75□□□□□ -0.21
RNF43-208ENST00000584437 CPDO75976 1380 aa13.75□□□□□ -0.21
RNF43-208ENST00000584437 ABCB11O95342 1321 aa13.75□□□□□ -0.21
RNF43-208ENST00000584437 HUS1O60921 280 aa13.75□□□□□ -0.21
RNF43-208ENST00000584437 ZNF200P98182 395 aaPredicted RBP13.75□□□□□ -0.21
RNF43-208ENST00000584437 FAM102AQ5T9C2 384 aaPredicted RBP13.75□□□□□ -0.21
RNF43-208ENST00000584437 RCSD1Q6JBY9 416 aa13.75□□□□□ -0.21
RNF43-208ENST00000584437 STX19Q8N4C7 294 aa13.75□□□□□ -0.21
RNF43-208ENST00000584437 PCYOX1LQ8NBM8 494 aa13.75□□□□□ -0.21
RNF43-208ENST00000584437 UTYO14607 1347 aa13.75□□□□□ -0.21
RNF43-208ENST00000584437 AKAP10O43572 662 aa13.75□□□□□ -0.21
RNF43-208ENST00000584437 ADCY3O60266 1144 aa13.75□□□□□ -0.21
RNF43-208ENST00000584437 CYP2D6P10635 497 aa13.75□□□□□ -0.21
RNF43-208ENST00000584437 UGP2Q16851 508 aa13.75□□□□□ -0.21
RNF43-208ENST00000584437 OR2W6PQ8NHA6 318 aa13.75□□□□□ -0.21
RNF43-208ENST00000584437 SYN2Q92777 582 aaPredicted RBP13.75□□□□□ -0.21
RNF43-208ENST00000584437 TIPINQ9BVW5 301 aa13.75□□□□□ -0.21
RNF43-208ENST00000584437 TMEM260Q9NX78 707 aa13.75□□□□□ -0.21
RNF43-208ENST00000584437 SAMD9Q5K651 1589 aa13.75□□□□□ -0.21
RNF43-208ENST00000584437 E5RI56 91 aa13.75□□□□□ -0.21
RNF43-208ENST00000584437 TBC1D4O60343 1298 aa13.75□□□□□ -0.21
RNF43-208ENST00000584437 KCNA2P16389 499 aa13.75□□□□□ -0.21
RNF43-208ENST00000584437 CYFIP1Q7L576 1253 aa13.75□□□□□ -0.21
RNF43-208ENST00000584437 CATSPER4Q7RTX7 472 aa13.75□□□□□ -0.21
RNF43-208ENST00000584437 BEST2Q8NFU1 509 aa13.75□□□□□ -0.21
RNF43-208ENST00000584437 CCT7Q99832 543 aa13.75□□□□□ -0.21
RNF43-208ENST00000584437 AGPAT5Q9NUQ2 364 aa13.75□□□□□ -0.21
RNF43-208ENST00000584437 WDR35Q9P2L0 1181 aa13.75□□□□□ -0.21
RNF43-208ENST00000584437 A0A1B0GW55 424 aa13.74□□□□□ -0.21
RNF43-208ENST00000584437 GOLGA8RI6L899 631 aa13.74□□□□□ -0.21
RNF43-208ENST00000584437 DUX4L2P0CJ85 424 aa13.74□□□□□ -0.21
RNF43-208ENST00000584437 DUX4L3P0CJ86 424 aa13.74□□□□□ -0.21
RNF43-208ENST00000584437 DUX4L4P0CJ87 422 aa13.74□□□□□ -0.21
RNF43-208ENST00000584437 DUX4L5P0CJ88 424 aa13.74□□□□□ -0.21
RNF43-208ENST00000584437 DUX4L6P0CJ89 424 aa13.74□□□□□ -0.21
RNF43-208ENST00000584437 DUX4L7P0CJ90 424 aa13.74□□□□□ -0.21
RNF43-208ENST00000584437 UCHL3P15374 230 aa13.74□□□□□ -0.21
RNF43-208ENST00000584437 LBRQ14739 615 aaKnown RBP13.74□□□□□ -0.21
RNF43-208ENST00000584437 LRRC36Q1X8D7 754 aa13.74□□□□□ -0.21
RNF43-208ENST00000584437 SERPINB12Q96P63 405 aa13.74□□□□□ -0.21
RNF43-208ENST00000584437 NEUROG2Q9H2A3 272 aa13.74□□□□□ -0.21
RNF43-208ENST00000584437 DHX35Q9H5Z1 703 aaKnown RBP13.74□□□□□ -0.21
RNF43-208ENST00000584437 ABCF3Q9NUQ8 709 aa13.74□□□□□ -0.21
RNF43-208ENST00000584437 IL1RAPL1Q9NZN1 696 aa13.74□□□□□ -0.21
RNF43-208ENST00000584437 DUX4Q9UBX2 424 aa13.74□□□□□ -0.21
RNF43-208ENST00000584437 MED14O60244 1454 aa13.74□□□□□ -0.21
RNF43-208ENST00000584437 PNPLA7Q6ZV29 1317 aa13.74□□□□□ -0.21
RNF43-208ENST00000584437 CDHR2Q9BYE9 1310 aa13.74□□□□□ -0.21
RNF43-208ENST00000584437 ASNSP08243 561 aa13.74□□□□□ -0.21
RNF43-208ENST00000584437 TMEM253P0C7T8 217 aa13.74□□□□□ -0.21
RNF43-208ENST00000584437 H2AFXP16104 143 aaPredicted RBP13.74□□□□□ -0.21
RNF43-208ENST00000584437 ATP6V1E1P36543 226 aa13.74□□□□□ -0.21
RNF43-208ENST00000584437 ADRM1Q16186 407 aa13.74□□□□□ -0.21
RNF43-208ENST00000584437 EDRF1Q3B7T1 1238 aa13.74□□□□□ -0.21
RNF43-208ENST00000584437 OLFML2BQ68BL8 750 aa13.74□□□□□ -0.21
RNF43-208ENST00000584437 C4orf33Q8N1A6 199 aa13.74□□□□□ -0.21
RNF43-208ENST00000584437 FUT8Q9BYC5 575 aa13.74□□□□□ -0.21
RNF43-208ENST00000584437 ERBB3P21860 1342 aa13.74□□□□□ -0.21
RNF43-208ENST00000584437 WDR47O94967 919 aa13.74□□□□□ -0.21
RNF43-208ENST00000584437 GYPCP04921 128 aa13.74□□□□□ -0.21
RNF43-208ENST00000584437 PLA2G4AP47712 749 aa13.74□□□□□ -0.21
RNF43-208ENST00000584437 KCNQ4P56696 695 aa13.74□□□□□ -0.21
RNF43-208ENST00000584437 PSMC5P62195 406 aa13.74□□□□□ -0.21
RNF43-208ENST00000584437 SLC44A4Q53GD3 710 aa13.74□□□□□ -0.21
RNF43-208ENST00000584437 THEM5Q8N1Q8 247 aa13.74□□□□□ -0.21
RNF43-208ENST00000584437 KIF2BQ8N4N8 673 aa13.74□□□□□ -0.21
RNF43-208ENST00000584437 C9orf72Q96LT7 481 aa13.74□□□□□ -0.21
RNF43-208ENST00000584437 TUFT1Q9NNX1 390 aa13.74□□□□□ -0.21
RNF43-208ENST00000584437 GSG1L2A8MUP6 293 aa13.74□□□□□ -0.21
RNF43-208ENST00000584437 KRT75O95678 551 aa13.74□□□□□ -0.21
RNF43-208ENST00000584437 ENO3P13929 434 aaPredicted RBP13.74□□□□□ -0.21
RNF43-208ENST00000584437 SLC10A5Q5PT55 438 aa13.74□□□□□ -0.21
RNF43-208ENST00000584437 C1orf228Q6PIY5 440 aa13.74□□□□□ -0.21
RNF43-208ENST00000584437 BTNL9Q6UXG8 535 aa13.74□□□□□ -0.21
RNF43-208ENST00000584437 DDI1Q8WTU0 396 aa13.74□□□□□ -0.21
RNF43-208ENST00000584437 OSBPL8Q9BZF1 889 aa13.74□□□□□ -0.21
RNF43-208ENST00000584437 GID8Q9NWU2 228 aa13.74□□□□□ -0.21
RNF43-208ENST00000584437 ZC3H7BQ9UGR2 993 aaKnown RBP13.74□□□□□ -0.21
RNF43-208ENST00000584437 CYP26A1O43174 497 aa13.74□□□□□ -0.21
RNF43-208ENST00000584437 CENPCQ03188 943 aa13.74□□□□□ -0.21
RNF43-208ENST00000584437 TEKT4Q8WW24 435 aa13.74□□□□□ -0.21
RNF43-208ENST00000584437 RMDN3Q96TC7 470 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms