RNA–Protein interactions for RNA: ENST00000583927.1

SKA2-208, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 533 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-208ENST00000583927 URODP06132 367 aa10.84□□□□□ -0.67
SKA2-208ENST00000583927 CNPP09543 421 aaKnown RBP10.84□□□□□ -0.67
SKA2-208ENST00000583927 KCNE1P15382 129 aa10.84□□□□□ -0.67
SKA2-208ENST00000583927 LIG1P18858 919 aa10.84□□□□□ -0.67
SKA2-208ENST00000583927 GLUD2P49448 558 aa10.84□□□□□ -0.67
SKA2-208ENST00000583927 CLCN4P51793 760 aa10.84□□□□□ -0.67
SKA2-208ENST00000583927 RBM10P98175 930 aaKnown RBP10.84□□□□□ -0.67
SKA2-208ENST00000583927 GTF2BQ00403 316 aa10.84□□□□□ -0.67
SKA2-208ENST00000583927 CREMQ03060 361 aa10.84□□□□□ -0.67
SKA2-208ENST00000583927 RAD51AP2Q09MP3 1159 aa10.84□□□□□ -0.67
SKA2-208ENST00000583927 ELAVL2Q12926 359 aaKnown RBP10.84□□□□□ -0.67
SKA2-208ENST00000583927 NOLC1Q14978 699 aaKnown RBP eCLIP10.84□□□□□ -0.67
SKA2-208ENST00000583927 CLUL1Q15846 466 aa10.84□□□□□ -0.67
SKA2-208ENST00000583927 KYAT1Q16773 422 aa10.84□□□□□ -0.67
SKA2-208ENST00000583927 CYP26C1Q6V0L0 522 aa10.84□□□□□ -0.67
SKA2-208ENST00000583927 CCDC73Q6ZRK6 1079 aa10.84□□□□□ -0.67
SKA2-208ENST00000583927 HAUS6Q7Z4H7 955 aa10.84□□□□□ -0.67
SKA2-208ENST00000583927 RASSF8Q8NHQ8 419 aa10.84□□□□□ -0.67
SKA2-208ENST00000583927 ZNF396Q96N95 335 aaPredicted RBP10.84□□□□□ -0.67
SKA2-208ENST00000583927 CLIC6Q96NY7 704 aa10.84□□□□□ -0.67
SKA2-208ENST00000583927 NECTIN4Q96NY8 510 aa10.84□□□□□ -0.67
SKA2-208ENST00000583927 ACAP3Q96P50 834 aa10.84□□□□□ -0.67
SKA2-208ENST00000583927 KLHL5Q96PQ7 755 aa10.84□□□□□ -0.67
SKA2-208ENST00000583927 TSPAN18Q96SJ8 248 aa10.84□□□□□ -0.67
SKA2-208ENST00000583927 ADAM7Q9H2U9 754 aa10.84□□□□□ -0.67
SKA2-208ENST00000583927 SLC38A7Q9NVC3 462 aa10.84□□□□□ -0.67
SKA2-208ENST00000583927 CNTN3Q9P232 1028 aa10.84□□□□□ -0.67
SKA2-208ENST00000583927 USP20Q9Y2K6 914 aa10.84□□□□□ -0.67
SKA2-208ENST00000583927 GDAQ9Y2T3 454 aa10.84□□□□□ -0.67
SKA2-208ENST00000583927 TECTAO75443 2155 aa10.84□□□□□ -0.67
SKA2-208ENST00000583927 SCN1AP35498 2009 aa10.84□□□□□ -0.67
SKA2-208ENST00000583927 NPHP3-ACAD11A0A0J9YXS1 232 aa10.83□□□□□ -0.68
SKA2-208ENST00000583927 SMIM28A0A1B0GU29 152 aa10.83□□□□□ -0.68
SKA2-208ENST00000583927 SPTLC2O15270 562 aa10.83□□□□□ -0.68
SKA2-208ENST00000583927 CLDN3O15551 220 aa10.83□□□□□ -0.68
SKA2-208ENST00000583927 TRAK2O60296 914 aa10.83□□□□□ -0.68
SKA2-208ENST00000583927 TADA2AO75478 443 aa10.83□□□□□ -0.68
SKA2-208ENST00000583927 FAM13AO94988 1023 aa10.83□□□□□ -0.68
SKA2-208ENST00000583927 ADH1AP07327 375 aa10.83□□□□□ -0.68
SKA2-208ENST00000583927 ADRB2P07550 413 aa10.83□□□□□ -0.68
SKA2-208ENST00000583927 ZSCAN22P10073 491 aaPredicted RBP10.83□□□□□ -0.68
SKA2-208ENST00000583927 ALADP13716 330 aa10.83□□□□□ -0.68
SKA2-208ENST00000583927 MTHFRP42898 656 aa10.83□□□□□ -0.68
SKA2-208ENST00000583927 YARSP54577 528 aaKnown RBP10.83□□□□□ -0.68
SKA2-208ENST00000583927 POU5F1Q01860 360 aaKnown RBP10.83□□□□□ -0.68
SKA2-208ENST00000583927 UPP1Q16831 310 aa10.83□□□□□ -0.68
SKA2-208ENST00000583927 RRAGBQ5VZM2 374 aa10.83□□□□□ -0.68
SKA2-208ENST00000583927 CES5AQ6NT32 575 aa10.83□□□□□ -0.68
SKA2-208ENST00000583927 PDXDC1Q6P996 788 aa10.83□□□□□ -0.68
SKA2-208ENST00000583927 C15orf39Q6ZRI6 1047 aa10.83□□□□□ -0.68
SKA2-208ENST00000583927 SV2BQ7L1I2 683 aa10.83□□□□□ -0.68
SKA2-208ENST00000583927 TAS1R1Q7RTX1 841 aa10.83□□□□□ -0.68
SKA2-208ENST00000583927 MAP4K3Q8IVH8 894 aa10.83□□□□□ -0.68
SKA2-208ENST00000583927 MYCT1Q8N699 235 aa10.83□□□□□ -0.68
SKA2-208ENST00000583927 CEP120Q8N960 986 aa10.83□□□□□ -0.68
SKA2-208ENST00000583927 TMEM87AQ8NBN3 555 aa10.83□□□□□ -0.68
SKA2-208ENST00000583927 CMASQ8NFW8 434 aaPredicted RBP10.83□□□□□ -0.68
SKA2-208ENST00000583927 AUTS2Q8WXX7 1259 aa10.83□□□□□ -0.68
SKA2-208ENST00000583927 HVCN1Q96D96 273 aa10.83□□□□□ -0.68
SKA2-208ENST00000583927 DNAJC19Q96DA6 116 aa10.83□□□□□ -0.68
SKA2-208ENST00000583927 DDX27Q96GQ7 796 aaKnown RBP10.83□□□□□ -0.68
SKA2-208ENST00000583927 SNX27Q96L92 541 aa10.83□□□□□ -0.68
SKA2-208ENST00000583927 GPR62Q9BZJ7 368 aa10.83□□□□□ -0.68
SKA2-208ENST00000583927 CUEDC2Q9H467 287 aa10.83□□□□□ -0.68
SKA2-208ENST00000583927 PLEKHA5Q9HAU0 1116 aa10.83□□□□□ -0.68
SKA2-208ENST00000583927 FOXD4L1Q9NU39 408 aa10.83□□□□□ -0.68
SKA2-208ENST00000583927 TBX20Q9UMR3 447 aa10.83□□□□□ -0.68
SKA2-208ENST00000583927 ZNF318Q5VUA4 2279 aa10.83□□□□□ -0.68
SKA2-208ENST00000583927 NOTCH4Q99466 2003 aa10.82□□□□□ -0.68
SKA2-208ENST00000583927 FRMD3A2A2Y4 597 aa10.82□□□□□ -0.68
SKA2-208ENST00000583927 F8W810 466 aa10.82□□□□□ -0.68
SKA2-208ENST00000583927 TEX28O15482 410 aa10.82□□□□□ -0.68
SKA2-208ENST00000583927 FAM189A1O60320 539 aa10.82□□□□□ -0.68
SKA2-208ENST00000583927 GPR37L1O60883 481 aa10.82□□□□□ -0.68
SKA2-208ENST00000583927 TBCAO75347 108 aaKnown RBP10.82□□□□□ -0.68
SKA2-208ENST00000583927 KIF4AO95239 1232 aa10.82□□□□□ -0.68
SKA2-208ENST00000583927 F13A1P00488 732 aa10.82□□□□□ -0.68
SKA2-208ENST00000583927 HSP90AA1P07900 732 aaKnown RBP10.82□□□□□ -0.68
SKA2-208ENST00000583927 GAP43P17677 238 aa10.82□□□□□ -0.68
SKA2-208ENST00000583927 KLRC2P26717 231 aa10.82□□□□□ -0.68
SKA2-208ENST00000583927 SSTR3P32745 418 aaPredicted RBP10.82□□□□□ -0.68
SKA2-208ENST00000583927 RPL9P32969 192 aaKnown RBP10.82□□□□□ -0.68
SKA2-208ENST00000583927 CEBPZQ03701 1054 aaKnown RBP10.82□□□□□ -0.68
SKA2-208ENST00000583927 STK38Q15208 465 aa10.82□□□□□ -0.68
SKA2-208ENST00000583927 HERC4Q5GLZ8 1057 aaPredicted RBP10.82□□□□□ -0.68
SKA2-208ENST00000583927 SPECC1Q5M775 1068 aa10.82□□□□□ -0.68
SKA2-208ENST00000583927 KIAA1841Q6NSI8 718 aa10.82□□□□□ -0.68
SKA2-208ENST00000583927 LLGL2Q6P1M3 1020 aa10.82□□□□□ -0.68
SKA2-208ENST00000583927 ELMSAN1Q6PJG2 1045 aa10.82□□□□□ -0.68
SKA2-208ENST00000583927 DCLRE1AQ6PJP8 1040 aa10.82□□□□□ -0.68
SKA2-208ENST00000583927 KCNG4Q8TDN1 519 aa10.82□□□□□ -0.68
SKA2-208ENST00000583927 PIK3R5Q8WYR1 880 aa10.82□□□□□ -0.68
SKA2-208ENST00000583927 DDX12PQ92771 950 aa10.82□□□□□ -0.68
SKA2-208ENST00000583927 ZBTB45Q96K62 511 aaPredicted RBP10.82□□□□□ -0.68
SKA2-208ENST00000583927 FBXL18Q96ME1 805 aa10.82□□□□□ -0.68
SKA2-208ENST00000583927 RIPOR3Q96MK2 946 aa10.82□□□□□ -0.68
SKA2-208ENST00000583927 PAAF1Q9BRP4 392 aa10.82□□□□□ -0.68
SKA2-208ENST00000583927 TCHPQ9BT92 498 aa10.82□□□□□ -0.68
SKA2-208ENST00000583927 TTPALQ9BTX7 342 aa10.82□□□□□ -0.68
SKA2-208ENST00000583927 STRA6Q9BX79 667 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms