RNA–Protein interactions for RNA: ENST00000583800.1

SMCHD1-210, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-210ENST00000583800 PSMA5P28066 241 aa8.69□□□□□ -1.02
SMCHD1-210ENST00000583800 HOXA11P31270 313 aaPredicted RBP8.69□□□□□ -1.02
SMCHD1-210ENST00000583800 GMPRP36959 345 aa8.69□□□□□ -1.02
SMCHD1-210ENST00000583800 MLH1P40692 756 aa8.69□□□□□ -1.02
SMCHD1-210ENST00000583800 OR1G1P47890 313 aa8.69□□□□□ -1.02
SMCHD1-210ENST00000583800 QARSP47897 775 aaKnown RBP8.69□□□□□ -1.02
SMCHD1-210ENST00000583800 MMP16P51512 607 aa8.69□□□□□ -1.02
SMCHD1-210ENST00000583800 AK2P54819 239 aa8.69□□□□□ -1.02
SMCHD1-210ENST00000583800 LAMTOR4Q0VGL1 99 aa8.69□□□□□ -1.02
SMCHD1-210ENST00000583800 STK3Q13188 491 aa8.69□□□□□ -1.02
SMCHD1-210ENST00000583800 PPP2R5CQ13362 524 aa8.69□□□□□ -1.02
SMCHD1-210ENST00000583800 EMC2Q15006 297 aa8.69□□□□□ -1.02
SMCHD1-210ENST00000583800 C15orf39Q6ZRI6 1047 aa8.69□□□□□ -1.02
SMCHD1-210ENST00000583800 TAS1R1Q7RTX1 841 aa8.69□□□□□ -1.02
SMCHD1-210ENST00000583800 SRGAP1Q7Z6B7 1085 aa8.69□□□□□ -1.02
SMCHD1-210ENST00000583800 ANKMY2Q8IV38 441 aa8.69□□□□□ -1.02
SMCHD1-210ENST00000583800 CCDC105Q8IYK2 499 aa8.69□□□□□ -1.02
SMCHD1-210ENST00000583800 SIX5Q8N196 739 aa8.69□□□□□ -1.02
SMCHD1-210ENST00000583800 DEPDC4Q8N2C3 294 aa8.69□□□□□ -1.02
SMCHD1-210ENST00000583800 RNF149Q8NC42 400 aa8.69□□□□□ -1.02
SMCHD1-210ENST00000583800 SMG8Q8ND04 991 aaKnown RBP8.69□□□□□ -1.02
SMCHD1-210ENST00000583800 PRPF31Q8WWY3 499 aaKnown RBP8.69□□□□□ -1.02
SMCHD1-210ENST00000583800 PSPC1Q8WXF1 523 aaKnown RBP8.69□□□□□ -1.02
SMCHD1-210ENST00000583800 RSAD2Q8WXG1 361 aa8.69□□□□□ -1.02
SMCHD1-210ENST00000583800 NKD2Q969F2 451 aaPredicted RBP8.69□□□□□ -1.02
SMCHD1-210ENST00000583800 LXNQ9BS40 222 aa8.69□□□□□ -1.02
SMCHD1-210ENST00000583800 EIF2AQ9BY44 585 aaKnown RBP8.69□□□□□ -1.02
SMCHD1-210ENST00000583800 SLKQ9H2G2 1235 aaPredicted RBP8.69□□□□□ -1.02
SMCHD1-210ENST00000583800 DHX33Q9H6R0 707 aaKnown RBP8.69□□□□□ -1.02
SMCHD1-210ENST00000583800 KCNJ14Q9UNX9 436 aa8.69□□□□□ -1.02
SMCHD1-210ENST00000583800 VWA8A3KMH1 1905 aa8.69□□□□□ -1.02
SMCHD1-210ENST00000583800 CNTNAP2Q9UHC6 1331 aa8.69□□□□□ -1.02
SMCHD1-210ENST00000583800 TRIP11Q15643 1979 aa8.68□□□□□ -1.02
SMCHD1-210ENST00000583800 CCDC195A0A1B0GUA6 201 aa8.68□□□□□ -1.02
SMCHD1-210ENST00000583800 TEX28O15482 410 aa8.68□□□□□ -1.02
SMCHD1-210ENST00000583800 TSPAN1O60635 241 aa8.68□□□□□ -1.02
SMCHD1-210ENST00000583800 DTNBO60941 627 aa8.68□□□□□ -1.02
SMCHD1-210ENST00000583800 RFPL2O75678 378 aa8.68□□□□□ -1.02
SMCHD1-210ENST00000583800 ERLIN2O94905 339 aa8.68□□□□□ -1.02
SMCHD1-210ENST00000583800 GLUD1P00367 558 aa8.68□□□□□ -1.02
SMCHD1-210ENST00000583800 ALDH2P05091 517 aa8.68□□□□□ -1.02
SMCHD1-210ENST00000583800 P4HBP07237 508 aaKnown RBP8.68□□□□□ -1.02
SMCHD1-210ENST00000583800 ADH1AP07327 375 aa8.68□□□□□ -1.02
SMCHD1-210ENST00000583800 ITGA4P13612 1032 aa8.68□□□□□ -1.02
SMCHD1-210ENST00000583800 GBP2P32456 591 aaPredicted RBP8.68□□□□□ -1.02
SMCHD1-210ENST00000583800 GLUD2P49448 558 aa8.68□□□□□ -1.02
SMCHD1-210ENST00000583800 SCNN1GP51170 649 aa8.68□□□□□ -1.02
SMCHD1-210ENST00000583800 CYP4A11Q02928 519 aa8.68□□□□□ -1.02
SMCHD1-210ENST00000583800 ANGPT1Q15389 498 aa8.68□□□□□ -1.02
SMCHD1-210ENST00000583800 NCAPH2Q6IBW4 605 aa8.68□□□□□ -1.02
SMCHD1-210ENST00000583800 RUFY3Q7L099 469 aa8.68□□□□□ -1.02
SMCHD1-210ENST00000583800 KRT25Q7Z3Z0 450 aa8.68□□□□□ -1.02
SMCHD1-210ENST00000583800 NEK8Q86SG6 692 aa8.68□□□□□ -1.02
SMCHD1-210ENST00000583800 FERMT3Q86UX7 667 aa8.68□□□□□ -1.02
SMCHD1-210ENST00000583800 RETREG3Q86VR2 466 aa8.68□□□□□ -1.02
SMCHD1-210ENST00000583800 COLGALT2Q8IYK4 626 aa8.68□□□□□ -1.02
SMCHD1-210ENST00000583800 RNF168Q8IYW5 571 aaPredicted RBP8.68□□□□□ -1.02
SMCHD1-210ENST00000583800 ADSSL1Q8N142 457 aa8.68□□□□□ -1.02
SMCHD1-210ENST00000583800 CMASQ8NFW8 434 aaPredicted RBP8.68□□□□□ -1.02
SMCHD1-210ENST00000583800 DYDC2Q96IM9 177 aa8.68□□□□□ -1.02
SMCHD1-210ENST00000583800 CPB2Q96IY4 423 aa8.68□□□□□ -1.02
SMCHD1-210ENST00000583800 B3GALT6Q96L58 329 aa8.68□□□□□ -1.02
SMCHD1-210ENST00000583800 RPS6KC1Q96S38 1066 aa8.68□□□□□ -1.02
SMCHD1-210ENST00000583800 GAD1Q99259 594 aa8.68□□□□□ -1.02
SMCHD1-210ENST00000583800 APOL6Q9BWW8 343 aa8.68□□□□□ -1.02
SMCHD1-210ENST00000583800 KCNMB3Q9NPA1 279 aa8.68□□□□□ -1.02
SMCHD1-210ENST00000583800 MIOSQ9NXC5 875 aa8.68□□□□□ -1.02
SMCHD1-210ENST00000583800 IGSF9Q9P2J2 1179 aa8.68□□□□□ -1.02
SMCHD1-210ENST00000583800 KANSL3Q9P2N6 904 aa8.68□□□□□ -1.02
SMCHD1-210ENST00000583800 STK39Q9UEW8 545 aa8.68□□□□□ -1.02
SMCHD1-210ENST00000583800 HES2Q9Y543 173 aa8.68□□□□□ -1.02
SMCHD1-210ENST00000583800 IPPQ9Y573 584 aa8.68□□□□□ -1.02
SMCHD1-210ENST00000583800 CLUHO75153 1309 aa8.68□□□□□ -1.02
SMCHD1-210ENST00000583800 COL4A3Q01955 1670 aa8.68□□□□□ -1.02
SMCHD1-210ENST00000583800 PATJQ8NI35 1801 aa8.68□□□□□ -1.02
SMCHD1-210ENST00000583800 DCHS1Q96JQ0 3298 aa8.67□□□□□ -1.02
SMCHD1-210ENST00000583800 CCDC194A0A1B0GVG4 234 aa8.67□□□□□ -1.02
SMCHD1-210ENST00000583800 KRBA1A5PL33 1030 aa8.67□□□□□ -1.02
SMCHD1-210ENST00000583800 ARL5CA6NH57 179 aa8.67□□□□□ -1.02
SMCHD1-210ENST00000583800 ZBTB39O15060 712 aa8.67□□□□□ -1.02
SMCHD1-210ENST00000583800 CCNT1O60563 726 aaKnown RBP8.67□□□□□ -1.02
SMCHD1-210ENST00000583800 DKC1O60832 514 aaKnown RBP eCLIP8.67□□□□□ -1.02
SMCHD1-210ENST00000583800 EFEMP2O95967 443 aa8.67□□□□□ -1.02
SMCHD1-210ENST00000583800 SPATA31D3P0C874 917 aa8.67□□□□□ -1.02
SMCHD1-210ENST00000583800 YWHABP31946 246 aaKnown RBP8.67□□□□□ -1.02
SMCHD1-210ENST00000583800 DSC1Q08554 894 aa8.67□□□□□ -1.02
SMCHD1-210ENST00000583800 CTTNQ14247 550 aaKnown RBP8.67□□□□□ -1.02
SMCHD1-210ENST00000583800 EPHA7Q15375 998 aa8.67□□□□□ -1.02
SMCHD1-210ENST00000583800 SWI5Q1ZZU3 235 aa8.67□□□□□ -1.02
SMCHD1-210ENST00000583800 XKR9Q5GH70 373 aa8.67□□□□□ -1.02
SMCHD1-210ENST00000583800 KIAA0319Q5VV43 1072 aa8.67□□□□□ -1.02
SMCHD1-210ENST00000583800 DESI1Q6ICB0 168 aa8.67□□□□□ -1.02
SMCHD1-210ENST00000583800 GALNT17Q6IS24 598 aa8.67□□□□□ -1.02
SMCHD1-210ENST00000583800 SPATA31D4Q6ZUB0 917 aa8.67□□□□□ -1.02
SMCHD1-210ENST00000583800 PIK3AP1Q6ZUJ8 805 aa8.67□□□□□ -1.02
SMCHD1-210ENST00000583800 GLYCTKQ8IVS8 523 aa8.67□□□□□ -1.02
SMCHD1-210ENST00000583800 C4orf19Q8IY42 314 aa8.67□□□□□ -1.02
SMCHD1-210ENST00000583800 DTWD2Q8NBA8 298 aa8.67□□□□□ -1.02
SMCHD1-210ENST00000583800 CNNM3Q8NE01 707 aa8.67□□□□□ -1.02
SMCHD1-210ENST00000583800 ST13P5Q8NFI4 369 aaPredicted RBP8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms