RNA–Protein interactions for RNA: ENST00000583475.1

VAPA-206, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 939 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-206ENST00000583475 RPS6KA4O75676 772 aa4.85□□□□□ -1.63
VAPA-206ENST00000583475 SNRPA1P09661 255 aaKnown RBP4.85□□□□□ -1.63
VAPA-206ENST00000583475 ZSCAN20P17040 1043 aaPredicted RBP4.85□□□□□ -1.63
VAPA-206ENST00000583475 EDNRBP24530 442 aa4.85□□□□□ -1.63
VAPA-206ENST00000583475 MGAT1P26572 445 aa4.85□□□□□ -1.63
VAPA-206ENST00000583475 MCM7P33993 719 aa4.85□□□□□ -1.63
VAPA-206ENST00000583475 RNASE9P60153 205 aaKnown RBP4.85□□□□□ -1.63
VAPA-206ENST00000583475 FAM189BP81408 668 aa4.85□□□□□ -1.63
VAPA-206ENST00000583475 ABHD18Q0P651 414 aa4.85□□□□□ -1.63
VAPA-206ENST00000583475 RRP12Q5JTH9 1297 aaKnown RBP4.85□□□□□ -1.63
VAPA-206ENST00000583475 ATXN7L2Q5T6C5 722 aaPredicted RBP4.85□□□□□ -1.63
VAPA-206ENST00000583475 FAM102AQ5T9C2 384 aaPredicted RBP4.85□□□□□ -1.63
VAPA-206ENST00000583475 OTUD7BQ6GQQ9 843 aa4.85□□□□□ -1.63
VAPA-206ENST00000583475 USP51Q70EK9 711 aa4.85□□□□□ -1.63
VAPA-206ENST00000583475 RHOUQ7L0Q8 258 aa4.85□□□□□ -1.63
VAPA-206ENST00000583475 MRGPREQ86SM8 312 aa4.85□□□□□ -1.63
VAPA-206ENST00000583475 RPUSD2Q8IZ73 545 aaKnown RBP4.85□□□□□ -1.63
VAPA-206ENST00000583475 ZGPATQ8N5A5 531 aaKnown RBP4.85□□□□□ -1.63
VAPA-206ENST00000583475 CASKIN2Q8WXE0 1202 aa4.85□□□□□ -1.63
VAPA-206ENST00000583475 LARP4BQ92615 738 aaKnown RBP4.85□□□□□ -1.63
VAPA-206ENST00000583475 HAS1Q92839 578 aa4.85□□□□□ -1.63
VAPA-206ENST00000583475 CLIP3Q96DZ5 547 aa4.85□□□□□ -1.63
VAPA-206ENST00000583475 TEKT5Q96M29 485 aa4.85□□□□□ -1.63
VAPA-206ENST00000583475 MYOCQ99972 504 aa4.85□□□□□ -1.63
VAPA-206ENST00000583475 C7orf25Q9BPX7 421 aa4.85□□□□□ -1.63
VAPA-206ENST00000583475 TEX101Q9BY14 249 aa4.85□□□□□ -1.63
VAPA-206ENST00000583475 SLC13A1Q9BZW2 595 aa4.85□□□□□ -1.63
VAPA-206ENST00000583475 SENP6Q9GZR1 1112 aaPredicted RBP4.85□□□□□ -1.63
VAPA-206ENST00000583475 NRDE2Q9H7Z3 1164 aa4.85□□□□□ -1.63
VAPA-206ENST00000583475 LANCL2Q9NS86 450 aa4.85□□□□□ -1.63
VAPA-206ENST00000583475 TRPM5Q9NZQ8 1165 aa4.85□□□□□ -1.63
VAPA-206ENST00000583475 FAM30AQ9NZY2 134 aa4.85□□□□□ -1.63
VAPA-206ENST00000583475 SLC23A1Q9UHI7 598 aa4.85□□□□□ -1.63
VAPA-206ENST00000583475 ING1Q9UK53 422 aaPredicted RBP4.85□□□□□ -1.63
VAPA-206ENST00000583475 FZD1Q9UP38 647 aa4.85□□□□□ -1.63
VAPA-206ENST00000583475 LIMCH1Q9UPQ0 1083 aa4.85□□□□□ -1.63
VAPA-206ENST00000583475 REXO2Q9Y3B8 237 aaKnown RBP4.85□□□□□ -1.63
VAPA-206ENST00000583475 IPPQ9Y573 584 aa4.85□□□□□ -1.63
VAPA-206ENST00000583475 ACTL7AQ9Y615 435 aa4.85□□□□□ -1.63
VAPA-206ENST00000583475 XPOTO43592 962 aaKnown RBP4.84□□□□□ -1.63
VAPA-206ENST00000583475 MAKP20794 623 aa4.84□□□□□ -1.63
VAPA-206ENST00000583475 ALDH1A3P47895 512 aa4.84□□□□□ -1.63
VAPA-206ENST00000583475 CHN2P52757 468 aa4.84□□□□□ -1.63
VAPA-206ENST00000583475 ATP8B2P98198 1209 aa4.84□□□□□ -1.63
VAPA-206ENST00000583475 MTM1Q13496 603 aa4.84□□□□□ -1.63
VAPA-206ENST00000583475 PTPN21Q16825 1174 aa4.84□□□□□ -1.63
VAPA-206ENST00000583475 BRDTQ58F21 947 aaPredicted RBP4.84□□□□□ -1.63
VAPA-206ENST00000583475 GDF7Q7Z4P5 450 aa4.84□□□□□ -1.63
VAPA-206ENST00000583475 CCHCR1Q8TD31 782 aa4.84□□□□□ -1.63
VAPA-206ENST00000583475 LENG9Q96B70 501 aa4.84□□□□□ -1.63
VAPA-206ENST00000583475 COA7Q96BR5 231 aa4.84□□□□□ -1.63
VAPA-206ENST00000583475 NEU1Q99519 415 aa4.84□□□□□ -1.63
VAPA-206ENST00000583475 SLC46A2Q9BY10 475 aa4.84□□□□□ -1.63
VAPA-206ENST00000583475 MANSC1Q9H8J5 431 aa4.84□□□□□ -1.63
VAPA-206ENST00000583475 HOMER2Q9NSB8 354 aa4.84□□□□□ -1.63
VAPA-206ENST00000583475 TMEM140Q9NV12 185 aa4.84□□□□□ -1.63
VAPA-206ENST00000583475 MOCS1Q9NZB8 636 aa4.84□□□□□ -1.63
VAPA-206ENST00000583475 SRRDQ9UH36 339 aa4.84□□□□□ -1.63
VAPA-206ENST00000583475 NOP58Q9Y2X3 529 aaKnown RBP4.84□□□□□ -1.63
VAPA-206ENST00000583475 SPEF1Q9Y4P9 236 aa4.84□□□□□ -1.63
VAPA-206ENST00000583475 PCDHA13Q9Y5I0 950 aa4.84□□□□□ -1.63
VAPA-206ENST00000583475 MRFAP1Q9Y605 127 aa4.84□□□□□ -1.63
VAPA-206ENST00000583475 MYBBP1AQ9BQG0 1328 aaKnown RBP4.83□□□□□ -1.64
VAPA-206ENST00000583475 DIRC3C9JPN6 131 aa4.83□□□□□ -1.64
VAPA-206ENST00000583475 HTRA2O43464 458 aaPredicted RBP4.83□□□□□ -1.64
VAPA-206ENST00000583475 GPR32O75388 356 aa4.83□□□□□ -1.64
VAPA-206ENST00000583475 RAP2AP10114 183 aa4.83□□□□□ -1.64
VAPA-206ENST00000583475 DDCP20711 480 aa4.83□□□□□ -1.64
VAPA-206ENST00000583475 IBSPP21815 317 aaPredicted RBP4.83□□□□□ -1.64
VAPA-206ENST00000583475 PTGS2P35354 604 aa4.83□□□□□ -1.64
VAPA-206ENST00000583475 RAP2BP61225 183 aa4.83□□□□□ -1.64
VAPA-206ENST00000583475 UBXN2BQ14CS0 331 aa4.83□□□□□ -1.64
VAPA-206ENST00000583475 PDCD4Q53EL6 469 aaKnown RBP4.83□□□□□ -1.64
VAPA-206ENST00000583475 Q6ZPA2 131 aa4.83□□□□□ -1.64
VAPA-206ENST00000583475 SEM1Q6ZVN7 128 aa4.83□□□□□ -1.64
VAPA-206ENST00000583475 ZNF627Q7L945 461 aa4.83□□□□□ -1.64
VAPA-206ENST00000583475 RHOT1Q8IXI2 618 aa4.83□□□□□ -1.64
VAPA-206ENST00000583475 FAM193BQ96PV7 902 aaPredicted RBP4.83□□□□□ -1.64
VAPA-206ENST00000583475 DKK2Q9UBU2 259 aa4.83□□□□□ -1.64
VAPA-206ENST00000583475 HS3ST4Q9Y661 456 aa4.83□□□□□ -1.64
VAPA-206ENST00000583475 SHROOM4Q9ULL8 1493 aa4.82□□□□□ -1.64
VAPA-206ENST00000583475 PRSS23O95084 383 aa4.82□□□□□ -1.64
VAPA-206ENST00000583475 POMCP01189 267 aa4.82□□□□□ -1.64
VAPA-206ENST00000583475 ITGB1P05556 798 aa4.82□□□□□ -1.64
VAPA-206ENST00000583475 ATP5JP18859 108 aa4.82□□□□□ -1.64
VAPA-206ENST00000583475 KRT4P19013 534 aa4.82□□□□□ -1.64
VAPA-206ENST00000583475 SLC16A1P53985 500 aa4.82□□□□□ -1.64
VAPA-206ENST00000583475 TARDBPQ13148 414 aaKnown RBP eCLIP4.82□□□□□ -1.64
VAPA-206ENST00000583475 IL10RAQ13651 578 aa4.82□□□□□ -1.64
VAPA-206ENST00000583475 FHL2Q14192 279 aa4.82□□□□□ -1.64
VAPA-206ENST00000583475 AGAP9Q5VTM2 703 aa4.82□□□□□ -1.64
VAPA-206ENST00000583475 EFCAB2Q5VUJ9 269 aa4.82□□□□□ -1.64
VAPA-206ENST00000583475 MED25Q71SY5 747 aa4.82□□□□□ -1.64
VAPA-206ENST00000583475 PNMA8AQ86V59 439 aaPredicted RBP4.82□□□□□ -1.64
VAPA-206ENST00000583475 ULK2Q8IYT8 1036 aa4.82□□□□□ -1.64
VAPA-206ENST00000583475 AMER2Q8N7J2 671 aa4.82□□□□□ -1.64
VAPA-206ENST00000583475 NEU4Q8WWR8 484 aaPredicted RBP4.82□□□□□ -1.64
VAPA-206ENST00000583475 MYEOVQ96EZ4 313 aa4.82□□□□□ -1.64
VAPA-206ENST00000583475 PHACTR3Q96KR7 559 aa4.82□□□□□ -1.64
VAPA-206ENST00000583475 AKIP1Q9NQ31 210 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms