RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 FAM105AQ9NUU6 356 aa17.77■□□□□ 0.44
CDK5RAP3-228ENST00000583363 SNTG2Q9NY99 539 aa17.77■□□□□ 0.44
CDK5RAP3-228ENST00000583363 PCDHB2Q9Y5E7 798 aa17.77■□□□□ 0.44
CDK5RAP3-228ENST00000583363 A0A0U1RQF3 1178 aa17.76■□□□□ 0.43
CDK5RAP3-228ENST00000583363 ENPP3O14638 875 aa17.76■□□□□ 0.43
CDK5RAP3-228ENST00000583363 SERPINC1P01008 464 aa17.76■□□□□ 0.43
CDK5RAP3-228ENST00000583363 KRT13P13646 458 aa17.76■□□□□ 0.43
CDK5RAP3-228ENST00000583363 VAMP7P51809 220 aa17.76■□□□□ 0.43
CDK5RAP3-228ENST00000583363 COPB1P53618 953 aaKnown RBP17.76■□□□□ 0.43
CDK5RAP3-228ENST00000583363 FPGSQ05932 587 aa17.76■□□□□ 0.43
CDK5RAP3-228ENST00000583363 BFSP1Q12934 665 aa17.76■□□□□ 0.43
CDK5RAP3-228ENST00000583363 PSMD6Q15008 389 aa17.76■□□□□ 0.43
CDK5RAP3-228ENST00000583363 ENOX2Q16206 610 aaKnown RBP17.76■□□□□ 0.43
CDK5RAP3-228ENST00000583363 MAN2A1Q16706 1144 aa17.76■□□□□ 0.43
CDK5RAP3-228ENST00000583363 TCTN1Q2MV58 587 aa17.76■□□□□ 0.43
CDK5RAP3-228ENST00000583363 SARM1Q6SZW1 724 aa17.76■□□□□ 0.43
CDK5RAP3-228ENST00000583363 DEFB128Q7Z7B8 93 aa17.76■□□□□ 0.43
CDK5RAP3-228ENST00000583363 TMEM199Q8N511 208 aa17.76■□□□□ 0.43
CDK5RAP3-228ENST00000583363 PARD3BQ8TEW8 1205 aa17.76■□□□□ 0.43
CDK5RAP3-228ENST00000583363 NAP1L5Q96NT1 182 aaPredicted RBP17.76■□□□□ 0.43
CDK5RAP3-228ENST00000583363 CCDC94Q9BW85 323 aaPredicted RBP17.76■□□□□ 0.43
CDK5RAP3-228ENST00000583363 TSPYL2Q9H2G4 693 aaPredicted RBP17.76■□□□□ 0.43
CDK5RAP3-228ENST00000583363 TAB2Q9NYJ8 693 aa17.76■□□□□ 0.43
CDK5RAP3-228ENST00000583363 RBAKQ9NYW8 714 aaPredicted RBP17.76■□□□□ 0.43
CDK5RAP3-228ENST00000583363 IPPQ9Y573 584 aa17.76■□□□□ 0.43
CDK5RAP3-228ENST00000583363 TET1Q8NFU7 2136 aa17.75■□□□□ 0.43
CDK5RAP3-228ENST00000583363 TMEM265A0A087WTH1 108 aa17.75■□□□□ 0.43
CDK5RAP3-228ENST00000583363 MEFVO15553 781 aaPredicted RBP17.75■□□□□ 0.43
CDK5RAP3-228ENST00000583363 SKIP12755 728 aa17.75■□□□□ 0.43
CDK5RAP3-228ENST00000583363 PRKCSHP14314 528 aaPredicted RBP17.75■□□□□ 0.43
CDK5RAP3-228ENST00000583363 RAB27AP51159 221 aa17.75■□□□□ 0.43
CDK5RAP3-228ENST00000583363 WNT7BP56706 349 aa17.75■□□□□ 0.43
CDK5RAP3-228ENST00000583363 UBASH3AP57075 661 aa17.75■□□□□ 0.43
CDK5RAP3-228ENST00000583363 NR1I3Q14994 352 aa17.75■□□□□ 0.43
CDK5RAP3-228ENST00000583363 SURF1Q15526 300 aa17.75■□□□□ 0.43
CDK5RAP3-228ENST00000583363 SLC10A6Q3KNW5 377 aa17.75■□□□□ 0.43
CDK5RAP3-228ENST00000583363 VWA3BQ502W6 1294 aa17.75■□□□□ 0.43
CDK5RAP3-228ENST00000583363 MIIPQ5JXC2 388 aa17.75■□□□□ 0.43
CDK5RAP3-228ENST00000583363 C1orf220Q5T0J3 134 aa17.75■□□□□ 0.43
CDK5RAP3-228ENST00000583363 SLC24A5Q71RS6 500 aa17.75■□□□□ 0.43
CDK5RAP3-228ENST00000583363 LINC01599Q8WXQ3 324 aa17.75■□□□□ 0.43
CDK5RAP3-228ENST00000583363 VPS16Q9H269 839 aa17.75■□□□□ 0.43
CDK5RAP3-228ENST00000583363 RNF39Q9H2S5 420 aa17.75■□□□□ 0.43
CDK5RAP3-228ENST00000583363 NXF3Q9H4D5 531 aaKnown RBP17.75■□□□□ 0.43
CDK5RAP3-228ENST00000583363 HES2Q9Y543 173 aa17.75■□□□□ 0.43
CDK5RAP3-228ENST00000583363 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.75■□□□□ 0.43
CDK5RAP3-228ENST00000583363 SCN5AQ14524 2016 aa17.74■□□□□ 0.43
CDK5RAP3-228ENST00000583363 A0A1B0GTH6 734 aa17.74■□□□□ 0.43
CDK5RAP3-228ENST00000583363 LACTBL1A8MY62 500 aa17.74■□□□□ 0.43
CDK5RAP3-228ENST00000583363 C9IYK1 514 aa17.74■□□□□ 0.43
CDK5RAP3-228ENST00000583363 DLG4P78352 724 aa17.74■□□□□ 0.43
CDK5RAP3-228ENST00000583363 CLDN10P78369 228 aa17.74■□□□□ 0.43
CDK5RAP3-228ENST00000583363 PLCB2Q00722 1185 aa17.74■□□□□ 0.43
CDK5RAP3-228ENST00000583363 PPP2R3AQ06190 1150 aa17.74■□□□□ 0.43
CDK5RAP3-228ENST00000583363 KCNH2Q12809 1159 aa17.74■□□□□ 0.43
CDK5RAP3-228ENST00000583363 GRIN2CQ14957 1233 aa17.74■□□□□ 0.43
CDK5RAP3-228ENST00000583363 ALKAL1Q6UXT8 129 aa17.74■□□□□ 0.43
CDK5RAP3-228ENST00000583363 ECHDC2Q86YB7 292 aa17.74■□□□□ 0.43
CDK5RAP3-228ENST00000583363 RPUSD2Q8IZ73 545 aaKnown RBP17.74■□□□□ 0.43
CDK5RAP3-228ENST00000583363 SLC35C1Q96A29 364 aa17.74■□□□□ 0.43
CDK5RAP3-228ENST00000583363 CCDC127Q96BQ5 260 aa17.74■□□□□ 0.43
CDK5RAP3-228ENST00000583363 POP1Q99575 1024 aaKnown RBP17.74■□□□□ 0.43
CDK5RAP3-228ENST00000583363 PLEKHA5Q9HAU0 1116 aa17.74■□□□□ 0.43
CDK5RAP3-228ENST00000583363 PDE11AQ9HCR9 933 aa17.74■□□□□ 0.43
CDK5RAP3-228ENST00000583363 RTN4Q9NQC3 1192 aaKnown RBP17.74■□□□□ 0.43
CDK5RAP3-228ENST00000583363 C1orf112Q9NSG2 853 aa17.74■□□□□ 0.43
CDK5RAP3-228ENST00000583363 IFNKQ9P0W0 207 aa17.74■□□□□ 0.43
CDK5RAP3-228ENST00000583363 TTC26A0AVF1 554 aa17.73■□□□□ 0.43
CDK5RAP3-228ENST00000583363 LRRIQ3A6PVS8 624 aaPredicted RBP17.73■□□□□ 0.43
CDK5RAP3-228ENST00000583363 IL18RAPO95256 599 aa17.73■□□□□ 0.43
CDK5RAP3-228ENST00000583363 TPM2P07951 284 aa17.73■□□□□ 0.43
CDK5RAP3-228ENST00000583363 CXCL8P10145 99 aa17.73■□□□□ 0.43
CDK5RAP3-228ENST00000583363 ITGA4P13612 1032 aa17.73■□□□□ 0.43
CDK5RAP3-228ENST00000583363 CSF2RAP15509 400 aa17.73■□□□□ 0.43
CDK5RAP3-228ENST00000583363 AKAP5P24588 427 aa17.73■□□□□ 0.43
CDK5RAP3-228ENST00000583363 DNAJB2P25686 324 aa17.73■□□□□ 0.43
CDK5RAP3-228ENST00000583363 FILIP1LQ4L180 1135 aa17.73■□□□□ 0.43
CDK5RAP3-228ENST00000583363 XKR4Q5GH76 650 aa17.73■□□□□ 0.43
CDK5RAP3-228ENST00000583363 CNKSR3Q6P9H4 555 aa17.73■□□□□ 0.43
CDK5RAP3-228ENST00000583363 USP37Q86T82 979 aa17.73■□□□□ 0.43
CDK5RAP3-228ENST00000583363 ZNF598Q86UK7 904 aaKnown RBP17.73■□□□□ 0.43
CDK5RAP3-228ENST00000583363 CD302Q8IX05 232 aa17.73■□□□□ 0.43
CDK5RAP3-228ENST00000583363 HACE1Q8IYU2 909 aa17.73■□□□□ 0.43
CDK5RAP3-228ENST00000583363 ZNF516Q92618 1163 aa17.73■□□□□ 0.43
CDK5RAP3-228ENST00000583363 FAM212AQ96EL1 285 aa17.73■□□□□ 0.43
CDK5RAP3-228ENST00000583363 FNBP1Q96RU3 617 aa17.73■□□□□ 0.43
CDK5RAP3-228ENST00000583363 APOL6Q9BWW8 343 aa17.73■□□□□ 0.43
CDK5RAP3-228ENST00000583363 NDST4Q9H3R1 872 aa17.73■□□□□ 0.43
CDK5RAP3-228ENST00000583363 ASB7Q9H672 318 aa17.73■□□□□ 0.43
CDK5RAP3-228ENST00000583363 PARP2Q9UGN5 583 aa17.73■□□□□ 0.43
CDK5RAP3-228ENST00000583363 TANC1Q9C0D5 1861 aa17.72■□□□□ 0.43
CDK5RAP3-228ENST00000583363 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.72■□□□□ 0.43
CDK5RAP3-228ENST00000583363 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.72■□□□□ 0.43
CDK5RAP3-228ENST00000583363 RECQL4O94761 1208 aa17.72■□□□□ 0.43
CDK5RAP3-228ENST00000583363 EOMESO95936 686 aa17.72■□□□□ 0.43
CDK5RAP3-228ENST00000583363 AFPP02771 609 aaKnown RBP17.72■□□□□ 0.43
CDK5RAP3-228ENST00000583363 TRIM49P0CI25 452 aa17.72■□□□□ 0.43
CDK5RAP3-228ENST00000583363 TRIM49CP0CI26 452 aa17.72■□□□□ 0.43
CDK5RAP3-228ENST00000583363 DLATP10515 647 aaKnown RBP17.72■□□□□ 0.43
CDK5RAP3-228ENST00000583363 ATF7P17544 494 aaPredicted RBP17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms