RNA–Protein interactions for RNA: ENST00000582797.5

IFT20-212, Transcript of intraflagellar transport 20, humanhuman

TSL 2

Gene IFT20, Length 1,104 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-212ENST00000582797 VPS54Q9P1Q0 977 aa16.82■□□□□ 0.28
IFT20-212ENST00000582797 TRIP11Q15643 1979 aa16.82■□□□□ 0.28
IFT20-212ENST00000582797 WDFY3Q8IZQ1 3526 aa16.81■□□□□ 0.28
IFT20-212ENST00000582797 CASTOR2A6NHX0 329 aa16.81■□□□□ 0.28
IFT20-212ENST00000582797 INO80B-WBP1J3KQ70 363 aa16.81■□□□□ 0.28
IFT20-212ENST00000582797 PRPF3O43395 683 aaKnown RBP16.81■□□□□ 0.28
IFT20-212ENST00000582797 NPTXRO95502 500 aa16.81■□□□□ 0.28
IFT20-212ENST00000582797 POU2F2P09086 479 aa16.81■□□□□ 0.28
IFT20-212ENST00000582797 ARF4P18085 180 aaPredicted RBP16.81■□□□□ 0.28
IFT20-212ENST00000582797 FCARP24071 287 aa16.81■□□□□ 0.28
IFT20-212ENST00000582797 CCR3P51677 355 aa16.81■□□□□ 0.28
IFT20-212ENST00000582797 PTENP60484 403 aa16.81■□□□□ 0.28
IFT20-212ENST00000582797 SHC2P98077 582 aa16.81■□□□□ 0.28
IFT20-212ENST00000582797 PPP2R5DQ14738 602 aa16.81■□□□□ 0.28
IFT20-212ENST00000582797 AMHR2Q16671 573 aa16.81■□□□□ 0.28
IFT20-212ENST00000582797 ADCK5Q3MIX3 580 aa16.81■□□□□ 0.28
IFT20-212ENST00000582797 IL31Q6EBC2 164 aa16.81■□□□□ 0.28
IFT20-212ENST00000582797 MAMSTRQ6ZN01 415 aa16.81■□□□□ 0.28
IFT20-212ENST00000582797 BRD9Q9H8M2 597 aa16.81■□□□□ 0.28
IFT20-212ENST00000582797 NBEAQ8NFP9 2946 aa16.81■□□□□ 0.28
IFT20-212ENST00000582797 B4GALT5O43286 388 aa16.8■□□□□ 0.28
IFT20-212ENST00000582797 AXLP30530 894 aa16.8■□□□□ 0.28
IFT20-212ENST00000582797 OR1D2P34982 312 aa16.8■□□□□ 0.28
IFT20-212ENST00000582797 RFC5P40937 340 aa16.8■□□□□ 0.28
IFT20-212ENST00000582797 QARSP47897 775 aaKnown RBP16.8■□□□□ 0.28
IFT20-212ENST00000582797 RCAN1P53805 252 aa16.8■□□□□ 0.28
IFT20-212ENST00000582797 MBTD1Q05BQ5 628 aa16.8■□□□□ 0.28
IFT20-212ENST00000582797 GAS6Q14393 721 aa16.8■□□□□ 0.28
IFT20-212ENST00000582797 HACE1Q8IYU2 909 aa16.8■□□□□ 0.28
IFT20-212ENST00000582797 CCDC148Q8NFR7 591 aa16.8■□□□□ 0.28
IFT20-212ENST00000582797 DDX1Q92499 740 aaKnown RBP16.8■□□□□ 0.28
IFT20-212ENST00000582797 ELSPBP1Q96BH3 223 aa16.8■□□□□ 0.28
IFT20-212ENST00000582797 CXCL16Q9H2A7 254 aa16.8■□□□□ 0.28
IFT20-212ENST00000582797 RXFP3Q9NSD7 469 aa16.8■□□□□ 0.28
IFT20-212ENST00000582797 GDE1Q9NZC3 331 aa16.8■□□□□ 0.28
IFT20-212ENST00000582797 PARP2Q9UGN5 583 aa16.8■□□□□ 0.28
IFT20-212ENST00000582797 PKD1L2Q7Z442 2459 aa16.8■□□□□ 0.28
IFT20-212ENST00000582797 DSPP15924 2871 aaKnown RBP16.79■□□□□ 0.28
IFT20-212ENST00000582797 CYP3A7-CYP3A51PA0A087WV96 503 aa16.79■□□□□ 0.28
IFT20-212ENST00000582797 MAN2B1O00754 1011 aa16.79■□□□□ 0.28
IFT20-212ENST00000582797 PROS1P07225 676 aa16.79■□□□□ 0.28
IFT20-212ENST00000582797 RHOP08100 348 aa16.79■□□□□ 0.28
IFT20-212ENST00000582797 CYP3A7P24462 503 aa16.79■□□□□ 0.28
IFT20-212ENST00000582797 HOXC13P31276 330 aa16.79■□□□□ 0.28
IFT20-212ENST00000582797 CXCL12P48061 93 aa16.79■□□□□ 0.28
IFT20-212ENST00000582797 TUSC3Q13454 348 aa16.79■□□□□ 0.28
IFT20-212ENST00000582797 RAB33AQ14088 237 aa16.79■□□□□ 0.28
IFT20-212ENST00000582797 SF3A2Q15428 464 aaKnown RBP16.79■□□□□ 0.28
IFT20-212ENST00000582797 CCDC6Q16204 474 aa16.79■□□□□ 0.28
IFT20-212ENST00000582797 AASDHQ4L235 1098 aaPredicted RBP16.79■□□□□ 0.28
IFT20-212ENST00000582797 HEATR6Q6AI08 1181 aaKnown RBP16.79■□□□□ 0.28
IFT20-212ENST00000582797 RASEFQ8IZ41 740 aa16.79■□□□□ 0.28
IFT20-212ENST00000582797 FAM160A2Q8N612 972 aaPredicted RBP16.79■□□□□ 0.28
IFT20-212ENST00000582797 TCP11Q8WWU5 503 aa16.79■□□□□ 0.28
IFT20-212ENST00000582797 FAM3CQ92520 227 aa16.79■□□□□ 0.28
IFT20-212ENST00000582797 IER2Q9BTL4 223 aa16.79■□□□□ 0.28
IFT20-212ENST00000582797 VAV3Q9UKW4 847 aa16.79■□□□□ 0.28
IFT20-212ENST00000582797 PIAS3Q9Y6X2 628 aa16.79■□□□□ 0.28
IFT20-212ENST00000582797 KIF26AQ9ULI4 1882 aaPredicted RBP16.79■□□□□ 0.28
IFT20-212ENST00000582797 EML5Q05BV3 1969 aa16.78■□□□□ 0.28
IFT20-212ENST00000582797 CCDC196A0A1B0GTZ2 297 aa16.78■□□□□ 0.28
IFT20-212ENST00000582797 TM4SF5O14894 197 aa16.78■□□□□ 0.28
IFT20-212ENST00000582797 ZBTB39O15060 712 aa16.78■□□□□ 0.28
IFT20-212ENST00000582797 ASAP2O43150 1006 aa16.78■□□□□ 0.28
IFT20-212ENST00000582797 CPA1P15085 419 aa16.78■□□□□ 0.28
IFT20-212ENST00000582797 NCBP1Q09161 790 aaKnown RBP16.78■□□□□ 0.28
IFT20-212ENST00000582797 UVSSAQ2YD98 709 aa16.78■□□□□ 0.28
IFT20-212ENST00000582797 FAM78AQ5JUQ0 283 aa16.78■□□□□ 0.28
IFT20-212ENST00000582797 EXOC8Q8IYI6 725 aa16.78■□□□□ 0.28
IFT20-212ENST00000582797 TCEAL4Q96EI5 215 aa16.78■□□□□ 0.28
IFT20-212ENST00000582797 SLKQ9H2G2 1235 aaPredicted RBP16.78■□□□□ 0.28
IFT20-212ENST00000582797 XPNPEP1Q9NQW7 623 aa16.78■□□□□ 0.28
IFT20-212ENST00000582797 C1QTNF9BB2RNN3 333 aa16.77■□□□□ 0.28
IFT20-212ENST00000582797 SLC37A4O43826 429 aa16.77■□□□□ 0.28
IFT20-212ENST00000582797 C1QTNF9P0C862 333 aa16.77■□□□□ 0.28
IFT20-212ENST00000582797 CHRNB1P11230 501 aa16.77■□□□□ 0.28
IFT20-212ENST00000582797 IGFBP6P24592 240 aaPredicted RBP16.77■□□□□ 0.28
IFT20-212ENST00000582797 GDI1P31150 447 aa16.77■□□□□ 0.28
IFT20-212ENST00000582797 YWHABP31946 246 aaKnown RBP16.77■□□□□ 0.28
IFT20-212ENST00000582797 LIMK1P53667 647 aa16.77■□□□□ 0.28
IFT20-212ENST00000582797 CAPSQ13938 189 aa16.77■□□□□ 0.28
IFT20-212ENST00000582797 ACAP1Q15027 740 aa16.77■□□□□ 0.28
IFT20-212ENST00000582797 PCBP1Q15365 356 aaKnown RBP eCLIP16.77■□□□□ 0.28
IFT20-212ENST00000582797 XKR9Q5GH70 373 aa16.77■□□□□ 0.28
IFT20-212ENST00000582797 RNF20Q5VTR2 975 aa16.77■□□□□ 0.28
IFT20-212ENST00000582797 SLC27A1Q6PCB7 646 aa16.77■□□□□ 0.28
IFT20-212ENST00000582797 ASAP3Q8TDY4 903 aa16.77■□□□□ 0.28
IFT20-212ENST00000582797 MTRQ99707 1265 aa16.77■□□□□ 0.28
IFT20-212ENST00000582797 LXNQ9BS40 222 aa16.77■□□□□ 0.28
IFT20-212ENST00000582797 TRMT61BQ9BVS5 477 aaKnown RBP16.77■□□□□ 0.28
IFT20-212ENST00000582797 SLC26A6Q9BXS9 759 aa16.77■□□□□ 0.28
IFT20-212ENST00000582797 ZNF334Q9HCZ1 680 aaPredicted RBP16.77■□□□□ 0.28
IFT20-212ENST00000582797 C2orf42Q9NWW7 574 aa16.77■□□□□ 0.28
IFT20-212ENST00000582797 PPME1Q9Y570 386 aa16.77■□□□□ 0.28
IFT20-212ENST00000582797 CDY1Q9Y6F8 540 aa16.77■□□□□ 0.28
IFT20-212ENST00000582797 NID2Q14112 1375 aa16.77■□□□□ 0.27
IFT20-212ENST00000582797 ZMYM2Q9UBW7 1377 aa16.77■□□□□ 0.27
IFT20-212ENST00000582797 ITPR1Q14643 2758 aa16.76■□□□□ 0.27
IFT20-212ENST00000582797 K7ESF4 209 aa16.76■□□□□ 0.27
IFT20-212ENST00000582797 PTGESO14684 152 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms