RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 COL1A2P08123 1366 aa10.03□□□□□ -0.8
SS18-220ENST00000582092 MACROD2A1Z1Q3 448 aa10.03□□□□□ -0.8
SS18-220ENST00000582092 MYADML2A6NDP7 307 aa10.03□□□□□ -0.8
SS18-220ENST00000582092 RRN3P2A6NIE6 340 aa10.03□□□□□ -0.8
SS18-220ENST00000582092 PMM2O15305 246 aa10.03□□□□□ -0.8
SS18-220ENST00000582092 ADCY6O43306 1168 aa10.03□□□□□ -0.8
SS18-220ENST00000582092 PIGRP01833 764 aa10.03□□□□□ -0.8
SS18-220ENST00000582092 PLEKP08567 350 aaPredicted RBP10.03□□□□□ -0.8
SS18-220ENST00000582092 KLRC1P26715 233 aa10.03□□□□□ -0.8
SS18-220ENST00000582092 AP3M2P53677 418 aa10.03□□□□□ -0.8
SS18-220ENST00000582092 GFPT1Q06210 699 aaPredicted RBP10.03□□□□□ -0.8
SS18-220ENST00000582092 PPFIA1Q13136 1202 aa10.03□□□□□ -0.8
SS18-220ENST00000582092 PRPF4BQ13523 1007 aaKnown RBP10.03□□□□□ -0.8
SS18-220ENST00000582092 ITGA7Q13683 1181 aa10.03□□□□□ -0.8
SS18-220ENST00000582092 CAPSQ13938 189 aa10.03□□□□□ -0.8
SS18-220ENST00000582092 CBWD6Q4V339 395 aa10.03□□□□□ -0.8
SS18-220ENST00000582092 CBWD3Q5JTY5 395 aa10.03□□□□□ -0.8
SS18-220ENST00000582092 CBWD5Q5RIA9 395 aa10.03□□□□□ -0.8
SS18-220ENST00000582092 CXCL17Q6UXB2 119 aa10.03□□□□□ -0.8
SS18-220ENST00000582092 ZPBP2Q6X784 338 aa10.03□□□□□ -0.8
SS18-220ENST00000582092 ZBTB33Q86T24 672 aa10.03□□□□□ -0.8
SS18-220ENST00000582092 GPIHBP1Q8IV16 184 aa10.03□□□□□ -0.8
SS18-220ENST00000582092 PPM1KQ8N3J5 372 aa10.03□□□□□ -0.8
SS18-220ENST00000582092 FBXL13Q8NEE6 735 aa10.03□□□□□ -0.8
SS18-220ENST00000582092 TRIM58Q8NG06 486 aa10.03□□□□□ -0.8
SS18-220ENST00000582092 PARD3BQ8TEW8 1205 aa10.03□□□□□ -0.8
SS18-220ENST00000582092 LMBR1Q8WVP7 490 aa10.03□□□□□ -0.8
SS18-220ENST00000582092 FAM212AQ96EL1 285 aa10.03□□□□□ -0.8
SS18-220ENST00000582092 NOX5Q96PH1 765 aa10.03□□□□□ -0.8
SS18-220ENST00000582092 IMPG2Q9BZV3 1241 aa10.03□□□□□ -0.8
SS18-220ENST00000582092 C1orf112Q9NSG2 853 aa10.03□□□□□ -0.8
SS18-220ENST00000582092 ADAMTS1Q9UHI8 967 aa10.03□□□□□ -0.8
SS18-220ENST00000582092 WDR81Q562E7 1941 aa10.03□□□□□ -0.8
SS18-220ENST00000582092 LTBP2Q14767 1821 aa10.03□□□□□ -0.8
SS18-220ENST00000582092 TOM1L1O75674 476 aa10.02□□□□□ -0.81
SS18-220ENST00000582092 SLC34A2O95436 690 aa10.02□□□□□ -0.81
SS18-220ENST00000582092 LCA5LO95447 670 aa10.02□□□□□ -0.81
SS18-220ENST00000582092 ADRB2P07550 413 aa10.02□□□□□ -0.81
SS18-220ENST00000582092 MYL3P08590 195 aa10.02□□□□□ -0.81
SS18-220ENST00000582092 ADSSP30520 456 aa10.02□□□□□ -0.81
SS18-220ENST00000582092 GTF2F1P35269 517 aaKnown RBP eCLIP10.02□□□□□ -0.81
SS18-220ENST00000582092 PIK3CAP42336 1068 aa10.02□□□□□ -0.81
SS18-220ENST00000582092 NOP2P46087 812 aaKnown RBP10.02□□□□□ -0.81
SS18-220ENST00000582092 ACOT2P49753 483 aa10.02□□□□□ -0.81
SS18-220ENST00000582092 DLG4P78352 724 aa10.02□□□□□ -0.81
SS18-220ENST00000582092 APBA1Q02410 837 aa10.02□□□□□ -0.81
SS18-220ENST00000582092 PPP3CAQ08209 521 aa10.02□□□□□ -0.81
SS18-220ENST00000582092 SLC18A3Q16572 532 aa10.02□□□□□ -0.81
SS18-220ENST00000582092 ENOSF1Q7L5Y1 443 aa10.02□□□□□ -0.81
SS18-220ENST00000582092 RNF10Q8N5U6 811 aaKnown RBP10.02□□□□□ -0.81
SS18-220ENST00000582092 CEP112Q8N8E3 955 aa10.02□□□□□ -0.81
SS18-220ENST00000582092 CAGE1Q8TC20 777 aa10.02□□□□□ -0.81
SS18-220ENST00000582092 TRAPPC12Q8WVT3 735 aa10.02□□□□□ -0.81
SS18-220ENST00000582092 UBXN4Q92575 508 aa10.02□□□□□ -0.81
SS18-220ENST00000582092 FBXL18Q96ME1 805 aa10.02□□□□□ -0.81
SS18-220ENST00000582092 WDR24Q96S15 920 aa10.02□□□□□ -0.81
SS18-220ENST00000582092 MTG1Q9BT17 334 aaPredicted RBP10.02□□□□□ -0.81
SS18-220ENST00000582092 TMEM117Q9H0C3 514 aa10.02□□□□□ -0.81
SS18-220ENST00000582092 PRO3102Q9H379 93 aa10.02□□□□□ -0.81
SS18-220ENST00000582092 RNPEPQ9H4A4 650 aa10.02□□□□□ -0.81
SS18-220ENST00000582092 PRMT7Q9NVM4 692 aaPredicted RBP10.02□□□□□ -0.81
SS18-220ENST00000582092 RAB20Q9NX57 234 aa10.02□□□□□ -0.81
SS18-220ENST00000582092 RBAKQ9NYW8 714 aaPredicted RBP10.02□□□□□ -0.81
SS18-220ENST00000582092 ARID2Q68CP9 1835 aa10.02□□□□□ -0.81
SS18-220ENST00000582092 ADGRA3Q8IWK6 1321 aa10.02□□□□□ -0.81
SS18-220ENST00000582092 SCN10AQ9Y5Y9 1956 aa10.01□□□□□ -0.81
SS18-220ENST00000582092 LRRIQ3A6PVS8 624 aaPredicted RBP10.01□□□□□ -0.81
SS18-220ENST00000582092 ACKR2O00590 384 aa10.01□□□□□ -0.81
SS18-220ENST00000582092 KIAA0355O15063 1070 aa10.01□□□□□ -0.81
SS18-220ENST00000582092 OGTO15294 1046 aa10.01□□□□□ -0.81
SS18-220ENST00000582092 ZC3H11AO75152 810 aaKnown RBP eCLIP10.01□□□□□ -0.81
SS18-220ENST00000582092 ERLIN2O94905 339 aa10.01□□□□□ -0.81
SS18-220ENST00000582092 MMP3P08254 477 aa10.01□□□□□ -0.81
SS18-220ENST00000582092 ZNF286BP0CG31 522 aa10.01□□□□□ -0.81
SS18-220ENST00000582092 KRT5P13647 590 aa10.01□□□□□ -0.81
SS18-220ENST00000582092 PRKCIP41743 596 aa10.01□□□□□ -0.81
SS18-220ENST00000582092 ARHGAP25P42331 645 aa10.01□□□□□ -0.81
SS18-220ENST00000582092 CDK7P50613 346 aa10.01□□□□□ -0.81
SS18-220ENST00000582092 CLCN3P51790 818 aa10.01□□□□□ -0.81
SS18-220ENST00000582092 PTK2Q05397 1052 aa10.01□□□□□ -0.81
SS18-220ENST00000582092 TRPC3Q13507 836 aa10.01□□□□□ -0.81
SS18-220ENST00000582092 BMS1Q14692 1282 aaKnown RBP10.01□□□□□ -0.81
SS18-220ENST00000582092 PSMD6Q15008 389 aa10.01□□□□□ -0.81
SS18-220ENST00000582092 GRIK4Q16099 956 aa10.01□□□□□ -0.81
SS18-220ENST00000582092 KYAT1Q16773 422 aa10.01□□□□□ -0.81
SS18-220ENST00000582092 KIAA0753Q2KHM9 967 aa10.01□□□□□ -0.81
SS18-220ENST00000582092 EPC2Q52LR7 807 aa10.01□□□□□ -0.81
SS18-220ENST00000582092 ATF7IP2Q5U623 682 aa10.01□□□□□ -0.81
SS18-220ENST00000582092 CCDC70Q6NSX1 233 aa10.01□□□□□ -0.81
SS18-220ENST00000582092 GJB7Q6PEY0 223 aa10.01□□□□□ -0.81
SS18-220ENST00000582092 TMEM199Q8N511 208 aa10.01□□□□□ -0.81
SS18-220ENST00000582092 NLRP7Q8WX94 980 aa10.01□□□□□ -0.81
SS18-220ENST00000582092 BADQ92934 168 aa10.01□□□□□ -0.81
SS18-220ENST00000582092 KCNN1Q92952 543 aa10.01□□□□□ -0.81
SS18-220ENST00000582092 CEP89Q96ST8 783 aa10.01□□□□□ -0.81
SS18-220ENST00000582092 POP1Q99575 1024 aaKnown RBP10.01□□□□□ -0.81
SS18-220ENST00000582092 ADPGKQ9BRR6 497 aa10.01□□□□□ -0.81
SS18-220ENST00000582092 KATNAL1Q9BW62 490 aa10.01□□□□□ -0.81
SS18-220ENST00000582092 PDCL3Q9H2J4 239 aa10.01□□□□□ -0.81
SS18-220ENST00000582092 SIX2Q9NPC8 291 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms