RNA–Protein interactions for RNA: ENST00000581660.5

CSNK1D-219, Transcript of casein kinase 1 delta, humanhuman

TSL 5

Gene CSNK1D, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-219ENST00000581660 PPME1Q9Y570 386 aa15.45■□□□□ 0.06
CSNK1D-219ENST00000581660 LAMA1P25391 3075 aa15.45■□□□□ 0.06
CSNK1D-219ENST00000581660 ERLIN2O94905 339 aa15.44■□□□□ 0.06
CSNK1D-219ENST00000581660 RHOP08100 348 aa15.44■□□□□ 0.06
CSNK1D-219ENST00000581660 SRGAP2CP0DJJ0 459 aa15.44■□□□□ 0.06
CSNK1D-219ENST00000581660 PTGDRQ13258 359 aa15.44■□□□□ 0.06
CSNK1D-219ENST00000581660 PLA2G4FQ68DD2 849 aa15.44■□□□□ 0.06
CSNK1D-219ENST00000581660 LRSAM1Q6UWE0 723 aa15.44■□□□□ 0.06
CSNK1D-219ENST00000581660 EXOC8Q8IYI6 725 aa15.44■□□□□ 0.06
CSNK1D-219ENST00000581660 HACE1Q8IYU2 909 aa15.44■□□□□ 0.06
CSNK1D-219ENST00000581660 CCDC12Q8WUD4 166 aaPredicted RBP15.44■□□□□ 0.06
CSNK1D-219ENST00000581660 CCDC136Q96JN2 1154 aa15.44■□□□□ 0.06
CSNK1D-219ENST00000581660 TRMT61BQ9BVS5 477 aaKnown RBP15.44■□□□□ 0.06
CSNK1D-219ENST00000581660 CSRNP2Q9H175 543 aa15.44■□□□□ 0.06
CSNK1D-219ENST00000581660 NXF3Q9H4D5 531 aaKnown RBP15.44■□□□□ 0.06
CSNK1D-219ENST00000581660 ZNF334Q9HCZ1 680 aaPredicted RBP15.44■□□□□ 0.06
CSNK1D-219ENST00000581660 PIAS3Q9Y6X2 628 aa15.44■□□□□ 0.06
CSNK1D-219ENST00000581660 VWA8A3KMH1 1905 aa15.43■□□□□ 0.06
CSNK1D-219ENST00000581660 ZBTB43O43298 467 aa15.43■□□□□ 0.06
CSNK1D-219ENST00000581660 EPN2O95208 641 aa15.43■□□□□ 0.06
CSNK1D-219ENST00000581660 CEBPBP17676 345 aa15.43■□□□□ 0.06
CSNK1D-219ENST00000581660 GNA11P29992 359 aa15.43■□□□□ 0.06
CSNK1D-219ENST00000581660 USP11P51784 963 aa15.43■□□□□ 0.06
CSNK1D-219ENST00000581660 PSMC5P62195 406 aa15.43■□□□□ 0.06
CSNK1D-219ENST00000581660 GRM2Q14416 872 aa15.43■□□□□ 0.06
CSNK1D-219ENST00000581660 PLA2G2CQ5R387 149 aa15.43■□□□□ 0.06
CSNK1D-219ENST00000581660 FAM171A1Q5VUB5 890 aa15.43■□□□□ 0.06
CSNK1D-219ENST00000581660 CEP68Q76N32 757 aa15.43■□□□□ 0.06
CSNK1D-219ENST00000581660 RABGGTAQ92696 567 aa15.43■□□□□ 0.06
CSNK1D-219ENST00000581660 GJA10Q969M2 543 aa15.43■□□□□ 0.06
CSNK1D-219ENST00000581660 PAAF1Q9BRP4 392 aa15.43■□□□□ 0.06
CSNK1D-219ENST00000581660 ZFP14Q9HCL3 533 aa15.43■□□□□ 0.06
CSNK1D-219ENST00000581660 BRPF3Q9ULD4 1205 aa15.43■□□□□ 0.06
CSNK1D-219ENST00000581660 TICRRQ7Z2Z1 1910 aa15.43■□□□□ 0.06
CSNK1D-219ENST00000581660 ASH1LQ9NR48 2969 aaKnown RBP15.42■□□□□ 0.06
CSNK1D-219ENST00000581660 SRRM3A6NNA2 597 aaPredicted RBP15.42■□□□□ 0.06
CSNK1D-219ENST00000581660 ASAP2O43150 1006 aa15.42■□□□□ 0.06
CSNK1D-219ENST00000581660 MICAL2O94851 1124 aa15.42■□□□□ 0.06
CSNK1D-219ENST00000581660 KIF4AO95239 1232 aa15.42■□□□□ 0.06
CSNK1D-219ENST00000581660 RFC5P40937 340 aa15.42■□□□□ 0.06
CSNK1D-219ENST00000581660 RAP1GAPP47736 663 aa15.42■□□□□ 0.06
CSNK1D-219ENST00000581660 RCAN1P53805 252 aa15.42■□□□□ 0.06
CSNK1D-219ENST00000581660 NPEPPSP55786 919 aa15.42■□□□□ 0.06
CSNK1D-219ENST00000581660 ELAVL2Q12926 359 aaKnown RBP15.42■□□□□ 0.06
CSNK1D-219ENST00000581660 TUSC3Q13454 348 aa15.42■□□□□ 0.06
CSNK1D-219ENST00000581660 LRRC32Q14392 662 aa15.42■□□□□ 0.06
CSNK1D-219ENST00000581660 Q4G0T1 1027 aa15.42■□□□□ 0.06
CSNK1D-219ENST00000581660 FAM78AQ5JUQ0 283 aa15.42■□□□□ 0.06
CSNK1D-219ENST00000581660 PRSS36Q5K4E3 855 aa15.42■□□□□ 0.06
CSNK1D-219ENST00000581660 PSAPL1Q6NUJ1 521 aa15.42■□□□□ 0.06
CSNK1D-219ENST00000581660 C1orf228Q6PIY5 440 aa15.42■□□□□ 0.06
CSNK1D-219ENST00000581660 FERMT3Q86UX7 667 aa15.42■□□□□ 0.06
CSNK1D-219ENST00000581660 WDR5BQ86VZ2 330 aa15.42■□□□□ 0.06
CSNK1D-219ENST00000581660 IFNLR1Q8IU57 520 aaPredicted RBP15.42■□□□□ 0.06
CSNK1D-219ENST00000581660 RNF149Q8NC42 400 aa15.42■□□□□ 0.06
CSNK1D-219ENST00000581660 TMEM143Q96AN5 459 aa15.42■□□□□ 0.06
CSNK1D-219ENST00000581660 MSANTD3Q96H12 275 aa15.42■□□□□ 0.06
CSNK1D-219ENST00000581660 APOL6Q9BWW8 343 aa15.42■□□□□ 0.06
CSNK1D-219ENST00000581660 ARRDC1-AS1Q9H2J1 176 aa15.42■□□□□ 0.06
CSNK1D-219ENST00000581660 HELZ2Q9BYK8 2649 aaKnown RBP15.42■□□□□ 0.06
CSNK1D-219ENST00000581660 ARHGEF37A1IGU5 675 aa15.41■□□□□ 0.06
CSNK1D-219ENST00000581660 ARNTLO00327 626 aa15.41■□□□□ 0.06
CSNK1D-219ENST00000581660 SLC27A2O14975 620 aa15.41■□□□□ 0.06
CSNK1D-219ENST00000581660 PSMC3P17980 439 aa15.41■□□□□ 0.06
CSNK1D-219ENST00000581660 AKAP5P24588 427 aa15.41■□□□□ 0.06
CSNK1D-219ENST00000581660 CDC27P30260 824 aa15.41■□□□□ 0.06
CSNK1D-219ENST00000581660 OR1D2P34982 312 aa15.41■□□□□ 0.06
CSNK1D-219ENST00000581660 PTENP60484 403 aa15.41■□□□□ 0.06
CSNK1D-219ENST00000581660 AMHR2Q16671 573 aa15.41■□□□□ 0.06
CSNK1D-219ENST00000581660 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.41■□□□□ 0.06
CSNK1D-219ENST00000581660 ZNF579Q8NAF0 562 aaKnown RBP15.41■□□□□ 0.06
CSNK1D-219ENST00000581660 BICD2Q8TD16 824 aa15.41■□□□□ 0.06
CSNK1D-219ENST00000581660 DEPDC1BQ8WUY9 529 aa15.41■□□□□ 0.06
CSNK1D-219ENST00000581660 GATA6Q92908 595 aa15.41■□□□□ 0.06
CSNK1D-219ENST00000581660 CPB2Q96IY4 423 aa15.41■□□□□ 0.06
CSNK1D-219ENST00000581660 ASB16Q96NS5 453 aa15.41■□□□□ 0.06
CSNK1D-219ENST00000581660 ADAM33Q9BZ11 813 aa15.41■□□□□ 0.06
CSNK1D-219ENST00000581660 TRIM6Q9C030 488 aaPredicted RBP15.41■□□□□ 0.06
CSNK1D-219ENST00000581660 MTRRQ9UBK8 725 aa15.41■□□□□ 0.06
CSNK1D-219ENST00000581660 CACNG4Q9UBN1 327 aa15.41■□□□□ 0.06
CSNK1D-219ENST00000581660 PCDHGA5Q9Y5G8 931 aa15.41■□□□□ 0.06
CSNK1D-219ENST00000581660 LAMA5O15230 3695 aa15.4■□□□□ 0.06
CSNK1D-219ENST00000581660 GOLGA8AA7E2F4 631 aa15.4■□□□□ 0.06
CSNK1D-219ENST00000581660 GOLGA8BA8MQT2 603 aa15.4■□□□□ 0.06
CSNK1D-219ENST00000581660 NRG2O14511 850 aaPredicted RBP15.4■□□□□ 0.06
CSNK1D-219ENST00000581660 AXIN1O15169 862 aa15.4■□□□□ 0.06
CSNK1D-219ENST00000581660 GDI1P31150 447 aa15.4■□□□□ 0.06
CSNK1D-219ENST00000581660 RING1Q06587 406 aa15.4■□□□□ 0.06
CSNK1D-219ENST00000581660 SPIRE1Q08AE8 756 aa15.4■□□□□ 0.06
CSNK1D-219ENST00000581660 NCBP1Q09161 790 aaKnown RBP15.4■□□□□ 0.06
CSNK1D-219ENST00000581660 HEATR6Q6AI08 1181 aaKnown RBP15.4■□□□□ 0.06
CSNK1D-219ENST00000581660 VITQ6UXI7 678 aa15.4■□□□□ 0.06
CSNK1D-219ENST00000581660 CEP57Q86XR8 500 aa15.4■□□□□ 0.06
CSNK1D-219ENST00000581660 HASPINQ8TF76 798 aa15.4■□□□□ 0.06
CSNK1D-219ENST00000581660 TCP11Q8WWU5 503 aa15.4■□□□□ 0.06
CSNK1D-219ENST00000581660 LSG1Q9H089 658 aaKnown RBP15.4■□□□□ 0.06
CSNK1D-219ENST00000581660 LHX6Q9UPM6 363 aa15.4■□□□□ 0.06
CSNK1D-219ENST00000581660 IGSF10Q6WRI0 2623 aa15.4■□□□□ 0.06
CSNK1D-219ENST00000581660 CYP3A7-CYP3A51PA0A087WV96 503 aa15.39■□□□□ 0.05
CSNK1D-219ENST00000581660 PTPN2P17706 415 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms