RNA–Protein interactions for RNA: ENST00000580784.5

CSNK1D-215, Transcript of casein kinase 1 delta, humanhuman

TSL 1 (best)

Gene CSNK1D, Length 1,081 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-215ENST00000580784 IGFBP6P24592 240 aaPredicted RBP23.37■■□□□ 1.33
CSNK1D-215ENST00000580784 OSTNP61366 133 aa23.37■■□□□ 1.33
CSNK1D-215ENST00000580784 CUL4AQ13619 759 aa23.37■■□□□ 1.33
CSNK1D-215ENST00000580784 ZNF568Q3ZCX4 644 aa23.37■■□□□ 1.33
CSNK1D-215ENST00000580784 TMEM119Q4V9L6 283 aa23.37■■□□□ 1.33
CSNK1D-215ENST00000580784 CEP57Q86XR8 500 aa23.37■■□□□ 1.33
CSNK1D-215ENST00000580784 ZDHHC14Q8IZN3 488 aa23.37■■□□□ 1.33
CSNK1D-215ENST00000580784 CMASQ8NFW8 434 aaPredicted RBP23.37■■□□□ 1.33
CSNK1D-215ENST00000580784 ASIC4Q96FT7 647 aa23.37■■□□□ 1.33
CSNK1D-215ENST00000580784 PPP1R10Q96QC0 940 aaKnown RBP23.37■■□□□ 1.33
CSNK1D-215ENST00000580784 DAXXQ9UER7 740 aaPredicted RBP23.37■■□□□ 1.33
CSNK1D-215ENST00000580784 DPP7Q9UHL4 492 aa23.37■■□□□ 1.33
CSNK1D-215ENST00000580784 ZDBF2Q9HCK1 2354 aa23.37■■□□□ 1.33
CSNK1D-215ENST00000580784 CITO14578 2027 aa23.37■■□□□ 1.33
CSNK1D-215ENST00000580784 NPHP3-ACAD11A0A0J9YXS1 232 aa23.36■■□□□ 1.33
CSNK1D-215ENST00000580784 PLS3P13797 630 aa23.36■■□□□ 1.33
CSNK1D-215ENST00000580784 GRM5P41594 1212 aa23.36■■□□□ 1.33
CSNK1D-215ENST00000580784 ARSHQ5FYA8 562 aa23.36■■□□□ 1.33
CSNK1D-215ENST00000580784 LILRA6Q6PI73 481 aa23.36■■□□□ 1.33
CSNK1D-215ENST00000580784 CCDC149Q6ZUS6 474 aa23.36■■□□□ 1.33
CSNK1D-215ENST00000580784 BRAPQ7Z569 592 aa23.36■■□□□ 1.33
CSNK1D-215ENST00000580784 PLCD3Q8N3E9 789 aa23.36■■□□□ 1.33
CSNK1D-215ENST00000580784 SPIRE2Q8WWL2 714 aa23.36■■□□□ 1.33
CSNK1D-215ENST00000580784 AK8Q96MA6 479 aa23.36■■□□□ 1.33
CSNK1D-215ENST00000580784 TCHPQ9BT92 498 aa23.36■■□□□ 1.33
CSNK1D-215ENST00000580784 TTPALQ9BTX7 342 aa23.36■■□□□ 1.33
CSNK1D-215ENST00000580784 SORCS3Q9UPU3 1222 aa23.36■■□□□ 1.33
CSNK1D-215ENST00000580784 SMIM28A0A1B0GU29 152 aa23.35■■□□□ 1.33
CSNK1D-215ENST00000580784 BRD1O95696 1058 aa23.35■■□□□ 1.33
CSNK1D-215ENST00000580784 PROZP22891 400 aa23.35■■□□□ 1.33
CSNK1D-215ENST00000580784 CACNB1Q02641 598 aaPredicted RBP23.35■■□□□ 1.33
CSNK1D-215ENST00000580784 GRIN1Q05586 938 aa23.35■■□□□ 1.33
CSNK1D-215ENST00000580784 ELMSAN1Q6PJG2 1045 aa23.35■■□□□ 1.33
CSNK1D-215ENST00000580784 ALKAL1Q6UXT8 129 aa23.35■■□□□ 1.33
CSNK1D-215ENST00000580784 TMEM161BQ8NDZ6 487 aa23.35■■□□□ 1.33
CSNK1D-215ENST00000580784 LNX1Q8TBB1 728 aaPredicted RBP23.35■■□□□ 1.33
CSNK1D-215ENST00000580784 HDAC7Q8WUI4 952 aa23.35■■□□□ 1.33
CSNK1D-215ENST00000580784 ZBTB45Q96K62 511 aaPredicted RBP23.35■■□□□ 1.33
CSNK1D-215ENST00000580784 CCDC94Q9BW85 323 aaPredicted RBP23.35■■□□□ 1.33
CSNK1D-215ENST00000580784 SMOC2Q9H3U7 446 aa23.35■■□□□ 1.33
CSNK1D-215ENST00000580784 VPS37CA5D8V6 355 aaPredicted RBP23.34■■□□□ 1.33
CSNK1D-215ENST00000580784 ABLIM1O14639 778 aa23.34■■□□□ 1.33
CSNK1D-215ENST00000580784 C1RP00736 705 aa23.34■■□□□ 1.33
CSNK1D-215ENST00000580784 UBA7P41226 1012 aa23.34■■□□□ 1.33
CSNK1D-215ENST00000580784 CLCNKBP51801 687 aa23.34■■□□□ 1.33
CSNK1D-215ENST00000580784 SMTNP53814 917 aa23.34■■□□□ 1.33
CSNK1D-215ENST00000580784 YARSP54577 528 aaKnown RBP23.34■■□□□ 1.33
CSNK1D-215ENST00000580784 CREMQ03060 361 aa23.34■■□□□ 1.33
CSNK1D-215ENST00000580784 SF3A1Q15459 793 aaKnown RBP23.34■■□□□ 1.33
CSNK1D-215ENST00000580784 DCLRE1AQ6PJP8 1040 aa23.34■■□□□ 1.33
CSNK1D-215ENST00000580784 OTOP3Q7RTS5 596 aa23.34■■□□□ 1.33
CSNK1D-215ENST00000580784 LRRC15Q8TF66 581 aa23.34■■□□□ 1.33
CSNK1D-215ENST00000580784 PIK3R5Q8WYR1 880 aa23.34■■□□□ 1.33
CSNK1D-215ENST00000580784 ZNF707Q96C28 371 aaPredicted RBP23.34■■□□□ 1.33
CSNK1D-215ENST00000580784 ACSF2Q96CM8 615 aaPredicted RBP23.34■■□□□ 1.33
CSNK1D-215ENST00000580784 CLSTN3Q9BQT9 956 aa23.34■■□□□ 1.33
CSNK1D-215ENST00000580784 PLEKHA4Q9H4M7 779 aa23.34■■□□□ 1.33
CSNK1D-215ENST00000580784 GOLGA2P5Q9HBQ8 144 aa23.34■■□□□ 1.33
CSNK1D-215ENST00000580784 KCND2Q9NZV8 630 aa23.34■■□□□ 1.33
CSNK1D-215ENST00000580784 KCNG1Q9UIX4 513 aa23.34■■□□□ 1.33
CSNK1D-215ENST00000580784 DOCK6Q96HP0 2047 aa23.33■■□□□ 1.33
CSNK1D-215ENST00000580784 B3GAT3O94766 335 aa23.33■■□□□ 1.33
CSNK1D-215ENST00000580784 MAPTP10636 758 aaKnown RBP23.33■■□□□ 1.33
CSNK1D-215ENST00000580784 MCF2P10911 925 aa23.33■■□□□ 1.33
CSNK1D-215ENST00000580784 SOX4Q06945 474 aaPredicted RBP23.33■■□□□ 1.33
CSNK1D-215ENST00000580784 ELAVL2Q12926 359 aaKnown RBP23.33■■□□□ 1.33
CSNK1D-215ENST00000580784 STRN3Q13033 797 aa23.33■■□□□ 1.33
CSNK1D-215ENST00000580784 MTMR3Q13615 1198 aa23.33■■□□□ 1.33
CSNK1D-215ENST00000580784 DHX8Q14562 1220 aaKnown RBP23.33■■□□□ 1.33
CSNK1D-215ENST00000580784 PSMD5Q16401 504 aa23.33■■□□□ 1.33
CSNK1D-215ENST00000580784 XKR4Q5GH76 650 aa23.33■■□□□ 1.33
CSNK1D-215ENST00000580784 MPZL3Q6UWV2 235 aa23.33■■□□□ 1.33
CSNK1D-215ENST00000580784 CD300LGQ6UXG3 332 aa23.33■■□□□ 1.33
CSNK1D-215ENST00000580784 FBXL6Q8N531 539 aa23.33■■□□□ 1.33
CSNK1D-215ENST00000580784 SMG7Q92540 1137 aaKnown RBP23.33■■□□□ 1.33
CSNK1D-215ENST00000580784 CALML4Q96GE6 196 aa23.33■■□□□ 1.33
CSNK1D-215ENST00000580784 TOPORSQ9NS56 1045 aaPredicted RBP23.33■■□□□ 1.33
CSNK1D-215ENST00000580784 SLC26A4O43511 780 aa23.32■■□□□ 1.32
CSNK1D-215ENST00000580784 BMP15O95972 392 aa23.32■■□□□ 1.32
CSNK1D-215ENST00000580784 HARSP12081 509 aaKnown RBP23.32■■□□□ 1.32
CSNK1D-215ENST00000580784 UPP1Q16831 310 aa23.32■■□□□ 1.32
CSNK1D-215ENST00000580784 CYP26C1Q6V0L0 522 aa23.32■■□□□ 1.32
CSNK1D-215ENST00000580784 SUGP1Q8IWZ8 645 aaKnown RBP23.32■■□□□ 1.32
CSNK1D-215ENST00000580784 UBALD2Q8IYN6 164 aa23.32■■□□□ 1.32
CSNK1D-215ENST00000580784 ZMAT2Q96NC0 199 aaKnown RBP23.32■■□□□ 1.32
CSNK1D-215ENST00000580784 ACAP3Q96P50 834 aa23.32■■□□□ 1.32
CSNK1D-215ENST00000580784 RHOBTB2Q9BYZ6 727 aa23.32■■□□□ 1.32
CSNK1D-215ENST00000580784 WDR6Q9NNW5 1121 aaKnown RBP23.32■■□□□ 1.32
CSNK1D-215ENST00000580784 TMEM189-UBE2V1I3L0A0 370 aa23.31■■□□□ 1.32
CSNK1D-215ENST00000580784 MEFVO15553 781 aaPredicted RBP23.31■■□□□ 1.32
CSNK1D-215ENST00000580784 ADAM12O43184 909 aa23.31■■□□□ 1.32
CSNK1D-215ENST00000580784 N4BP1O75113 896 aaKnown RBP23.31■■□□□ 1.32
CSNK1D-215ENST00000580784 PDGFBP01127 241 aaPredicted RBP23.31■■□□□ 1.32
CSNK1D-215ENST00000580784 LONP1P36776 959 aaKnown RBP23.31■■□□□ 1.32
CSNK1D-215ENST00000580784 SEZ6Q53EL9 994 aa23.31■■□□□ 1.32
CSNK1D-215ENST00000580784 IER5LQ5T953 404 aa23.31■■□□□ 1.32
CSNK1D-215ENST00000580784 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.31■■□□□ 1.32
CSNK1D-215ENST00000580784 C3orf58Q8NDZ4 430 aa23.31■■□□□ 1.32
CSNK1D-215ENST00000580784 SNX27Q96L92 541 aa23.31■■□□□ 1.32
CSNK1D-215ENST00000580784 UROC1Q96N76 676 aa23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms