RNA–Protein interactions for RNA: ENST00000580751.5

SS18-216, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-216ENST00000580751 LRRC63Q05C16 580 aa16.88■□□□□ 0.29
SS18-216ENST00000580751 GRIK3Q13003 919 aa16.88■□□□□ 0.29
SS18-216ENST00000580751 CENPPQ6IPU0 288 aa16.88■□□□□ 0.29
SS18-216ENST00000580751 TMEM192Q8IY95 271 aa16.88■□□□□ 0.29
SS18-216ENST00000580751 SNX27Q96L92 541 aa16.88■□□□□ 0.29
SS18-216ENST00000580751 SAMD11Q96NU1 681 aa16.88■□□□□ 0.29
SS18-216ENST00000580751 KCTD10Q9H3F6 313 aa16.88■□□□□ 0.29
SS18-216ENST00000580751 RPF1Q9H9Y2 349 aaKnown RBP16.88■□□□□ 0.29
SS18-216ENST00000580751 PLEKHA5Q9HAU0 1116 aa16.88■□□□□ 0.29
SS18-216ENST00000580751 GRPEL1Q9HAV7 217 aa16.88■□□□□ 0.29
SS18-216ENST00000580751 TBC1D13Q9NVG8 400 aa16.88■□□□□ 0.29
SS18-216ENST00000580751 KLK14Q9P0G3 267 aa16.88■□□□□ 0.29
SS18-216ENST00000580751 CPSF3Q9UKF6 684 aaKnown RBP16.88■□□□□ 0.29
SS18-216ENST00000580751 MRPL42Q9Y6G3 142 aaKnown RBP16.88■□□□□ 0.29
SS18-216ENST00000580751 CALUO43852 315 aaPredicted RBP16.87■□□□□ 0.29
SS18-216ENST00000580751 EXTL3O43909 919 aa16.87■□□□□ 0.29
SS18-216ENST00000580751 CXCL8P10145 99 aa16.87■□□□□ 0.29
SS18-216ENST00000580751 LAG3P18627 525 aa16.87■□□□□ 0.29
SS18-216ENST00000580751 CCNE1P24864 410 aa16.87■□□□□ 0.29
SS18-216ENST00000580751 SCNN1GP51170 649 aa16.87■□□□□ 0.29
SS18-216ENST00000580751 TAP1Q03518 808 aa16.87■□□□□ 0.29
SS18-216ENST00000580751 PPP2R3AQ06190 1150 aa16.87■□□□□ 0.29
SS18-216ENST00000580751 SEZ6Q53EL9 994 aa16.87■□□□□ 0.29
SS18-216ENST00000580751 SPOUT1Q5T280 376 aaKnown RBP16.87■□□□□ 0.29
SS18-216ENST00000580751 SPATA1Q5VX52 437 aa16.87■□□□□ 0.29
SS18-216ENST00000580751 GPR153Q6NV75 609 aa16.87■□□□□ 0.29
SS18-216ENST00000580751 CD302Q8IX05 232 aa16.87■□□□□ 0.29
SS18-216ENST00000580751 DHX40Q8IX18 779 aaKnown RBP16.87■□□□□ 0.29
SS18-216ENST00000580751 GPD1LQ8N335 351 aa16.87■□□□□ 0.29
SS18-216ENST00000580751 NOC3LQ8WTT2 800 aaKnown RBP16.87■□□□□ 0.29
SS18-216ENST00000580751 TMEM174Q8WUU8 243 aa16.87■□□□□ 0.29
SS18-216ENST00000580751 CLP1Q92989 425 aaKnown RBP16.87■□□□□ 0.29
SS18-216ENST00000580751 FAM193BQ96PV7 902 aaPredicted RBP16.87■□□□□ 0.29
SS18-216ENST00000580751 TGS1Q96RS0 853 aaKnown RBP16.87■□□□□ 0.29
SS18-216ENST00000580751 KIAA1586Q9HCI6 787 aa16.87■□□□□ 0.29
SS18-216ENST00000580751 AAASQ9NRG9 546 aa16.87■□□□□ 0.29
SS18-216ENST00000580751 HSPBP1Q9NZL4 362 aa16.87■□□□□ 0.29
SS18-216ENST00000580751 TRAF3IP3Q9Y228 551 aa16.87■□□□□ 0.29
SS18-216ENST00000580751 CITO14578 2027 aa16.87■□□□□ 0.29
SS18-216ENST00000580751 RALGAPA2Q2PPJ7 1873 aa16.86■□□□□ 0.29
SS18-216ENST00000580751 FGFR1OPO95684 399 aaKnown RBP16.86■□□□□ 0.29
SS18-216ENST00000580751 POMCP01189 267 aa16.86■□□□□ 0.29
SS18-216ENST00000580751 CD44P16070 742 aaKnown RBP16.86■□□□□ 0.29
SS18-216ENST00000580751 TNFSF9P41273 254 aa16.86■□□□□ 0.29
SS18-216ENST00000580751 ACOT2P49753 483 aa16.86■□□□□ 0.29
SS18-216ENST00000580751 MYBPC2Q14324 1141 aa16.86■□□□□ 0.29
SS18-216ENST00000580751 ENOX2Q16206 610 aaKnown RBP16.86■□□□□ 0.29
SS18-216ENST00000580751 XKR4Q5GH76 650 aa16.86■□□□□ 0.29
SS18-216ENST00000580751 ZBTB41Q5SVQ8 909 aa16.86■□□□□ 0.29
SS18-216ENST00000580751 SLC9A9Q8IVB4 645 aa16.86■□□□□ 0.29
SS18-216ENST00000580751 XXYLT1Q8NBI6 393 aa16.86■□□□□ 0.29
SS18-216ENST00000580751 GSTCDQ8NEC7 633 aa16.86■□□□□ 0.29
SS18-216ENST00000580751 NELFBQ8WX92 580 aa16.86■□□□□ 0.29
SS18-216ENST00000580751 P2RX5Q93086 422 aa16.86■□□□□ 0.29
SS18-216ENST00000580751 SAAL1Q96ER3 474 aa16.86■□□□□ 0.29
SS18-216ENST00000580751 LRCH3Q96II8 777 aa16.86■□□□□ 0.29
SS18-216ENST00000580751 TSPAN18Q96SJ8 248 aa16.86■□□□□ 0.29
SS18-216ENST00000580751 FAM213AQ9BRX8 229 aa16.86■□□□□ 0.29
SS18-216ENST00000580751 PCIF1Q9H4Z3 704 aa16.86■□□□□ 0.29
SS18-216ENST00000580751 CNTN3Q9P232 1028 aa16.86■□□□□ 0.29
SS18-216ENST00000580751 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.86■□□□□ 0.29
SS18-216ENST00000580751 TTC26A0AVF1 554 aa16.85■□□□□ 0.29
SS18-216ENST00000580751 PTGESO14684 152 aa16.85■□□□□ 0.29
SS18-216ENST00000580751 CLIC2O15247 247 aa16.85■□□□□ 0.29
SS18-216ENST00000580751 ARHGEF15O94989 841 aa16.85■□□□□ 0.29
SS18-216ENST00000580751 NR3C1P04150 777 aa16.85■□□□□ 0.29
SS18-216ENST00000580751 THP07101 528 aa16.85■□□□□ 0.29
SS18-216ENST00000580751 KCNE1P15382 129 aa16.85■□□□□ 0.29
SS18-216ENST00000580751 RPL13P26373 211 aaKnown RBP16.85■□□□□ 0.29
SS18-216ENST00000580751 CYP2J2P51589 502 aa16.85■□□□□ 0.29
SS18-216ENST00000580751 AFF1P51825 1210 aaKnown RBP16.85■□□□□ 0.29
SS18-216ENST00000580751 ERVK-21P61565 698 aa16.85■□□□□ 0.29
SS18-216ENST00000580751 NCAPHQ15003 741 aa16.85■□□□□ 0.29
SS18-216ENST00000580751 NFIL3Q16649 462 aa16.85■□□□□ 0.29
SS18-216ENST00000580751 EDRF1Q3B7T1 1238 aa16.85■□□□□ 0.29
SS18-216ENST00000580751 SLC10A6Q3KNW5 377 aa16.85■□□□□ 0.29
SS18-216ENST00000580751 ZCWPW2Q504Y3 356 aa16.85■□□□□ 0.29
SS18-216ENST00000580751 ZNF697Q5TEC3 545 aa16.85■□□□□ 0.29
SS18-216ENST00000580751 ALKAL1Q6UXT8 129 aa16.85■□□□□ 0.29
SS18-216ENST00000580751 LRRC55Q6ZSA7 311 aa16.85■□□□□ 0.29
SS18-216ENST00000580751 RNF214Q8ND24 703 aa16.85■□□□□ 0.29
SS18-216ENST00000580751 FBXL18Q96ME1 805 aa16.85■□□□□ 0.29
SS18-216ENST00000580751 TSG101Q99816 390 aa16.85■□□□□ 0.29
SS18-216ENST00000580751 ASB7Q9H672 318 aa16.85■□□□□ 0.29
SS18-216ENST00000580751 CWH43Q9H720 699 aa16.85■□□□□ 0.29
SS18-216ENST00000580751 SLC38A7Q9NVC3 462 aa16.85■□□□□ 0.29
SS18-216ENST00000580751 RBAKQ9NYW8 714 aaPredicted RBP16.85■□□□□ 0.29
SS18-216ENST00000580751 TDRD15B5MCY1 1934 aaKnown RBP16.84■□□□□ 0.29
SS18-216ENST00000580751 CHD7Q9P2D1 2997 aa16.84■□□□□ 0.29
SS18-216ENST00000580751 SMIM28A0A1B0GU29 152 aa16.84■□□□□ 0.29
SS18-216ENST00000580751 GOLGA8IPA6NC78 632 aa16.84■□□□□ 0.29
SS18-216ENST00000580751 ZNF233A6NK53 670 aa16.84■□□□□ 0.29
SS18-216ENST00000580751 GOLGA8JA6NMD2 632 aa16.84■□□□□ 0.29
SS18-216ENST00000580751 EXOC3O60645 756 aa16.84■□□□□ 0.29
SS18-216ENST00000580751 ZC3H11AO75152 810 aaKnown RBP eCLIP16.84■□□□□ 0.29
SS18-216ENST00000580751 IL18RAPO95256 599 aa16.84■□□□□ 0.29
SS18-216ENST00000580751 ADRB2P07550 413 aa16.84■□□□□ 0.29
SS18-216ENST00000580751 LINC00271P0C7V0 271 aa16.84■□□□□ 0.29
SS18-216ENST00000580751 CTNNB1P35222 781 aa16.84■□□□□ 0.29
SS18-216ENST00000580751 PPM1AP35813 382 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms