RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 TMC2Q8TDI7 906 aa15.51■□□□□ 0.07
SKA2-205ENST00000580541 LINC01599Q8WXQ3 324 aa15.51■□□□□ 0.07
SKA2-205ENST00000580541 VWCEQ96DN2 955 aa15.51■□□□□ 0.07
SKA2-205ENST00000580541 ZBED2Q9BTP6 218 aa15.51■□□□□ 0.07
SKA2-205ENST00000580541 MRPL9Q9BYD2 267 aaKnown RBP15.51■□□□□ 0.07
SKA2-205ENST00000580541 CBX8Q9HC52 389 aa15.51■□□□□ 0.07
SKA2-205ENST00000580541 SLC38A7Q9NVC3 462 aa15.51■□□□□ 0.07
SKA2-205ENST00000580541 R3HCC1Q9Y3T6 440 aaKnown RBP15.51■□□□□ 0.07
SKA2-205ENST00000580541 HES2Q9Y543 173 aa15.51■□□□□ 0.07
SKA2-205ENST00000580541 CITO14578 2027 aa15.51■□□□□ 0.07
SKA2-205ENST00000580541 LTBP2Q14767 1821 aa15.5■□□□□ 0.07
SKA2-205ENST00000580541 AKAP3O75969 853 aa15.5■□□□□ 0.07
SKA2-205ENST00000580541 UPP2O95045 317 aa15.5■□□□□ 0.07
SKA2-205ENST00000580541 ADRB2P07550 413 aa15.5■□□□□ 0.07
SKA2-205ENST00000580541 BMP8BP34820 402 aa15.5■□□□□ 0.07
SKA2-205ENST00000580541 VAMP7P51809 220 aa15.5■□□□□ 0.07
SKA2-205ENST00000580541 MARSP56192 900 aaKnown RBP15.5■□□□□ 0.07
SKA2-205ENST00000580541 CYP24A1Q07973 514 aa15.5■□□□□ 0.07
SKA2-205ENST00000580541 PSMD6Q15008 389 aa15.5■□□□□ 0.07
SKA2-205ENST00000580541 ENOX2Q16206 610 aaKnown RBP15.5■□□□□ 0.07
SKA2-205ENST00000580541 SLC10A6Q3KNW5 377 aa15.5■□□□□ 0.07
SKA2-205ENST00000580541 CRELD2Q6UXH1 353 aaPredicted RBP15.5■□□□□ 0.07
SKA2-205ENST00000580541 ALKAL1Q6UXT8 129 aa15.5■□□□□ 0.07
SKA2-205ENST00000580541 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.5■□□□□ 0.07
SKA2-205ENST00000580541 LRRC55Q6ZSA7 311 aa15.5■□□□□ 0.07
SKA2-205ENST00000580541 CBWD2Q8IUF1 395 aa15.5■□□□□ 0.07
SKA2-205ENST00000580541 CEP120Q8N960 986 aa15.5■□□□□ 0.07
SKA2-205ENST00000580541 FAM193BQ96PV7 902 aaPredicted RBP15.5■□□□□ 0.07
SKA2-205ENST00000580541 GDF15Q99988 308 aa15.5■□□□□ 0.07
SKA2-205ENST00000580541 TMEM117Q9H0C3 514 aa15.5■□□□□ 0.07
SKA2-205ENST00000580541 FANCLQ9NW38 375 aa15.5■□□□□ 0.07
SKA2-205ENST00000580541 C2CD2Q9Y426 696 aa15.5■□□□□ 0.07
SKA2-205ENST00000580541 TTC26A0AVF1 554 aa15.49■□□□□ 0.07
SKA2-205ENST00000580541 ARL5CA6NH57 179 aa15.49■□□□□ 0.07
SKA2-205ENST00000580541 LACTBL1A8MY62 500 aa15.49■□□□□ 0.07
SKA2-205ENST00000580541 OFD1O75665 1012 aa15.49■□□□□ 0.07
SKA2-205ENST00000580541 THP07101 528 aa15.49■□□□□ 0.07
SKA2-205ENST00000580541 CXCL8P10145 99 aa15.49■□□□□ 0.07
SKA2-205ENST00000580541 KCNE1P15382 129 aa15.49■□□□□ 0.07
SKA2-205ENST00000580541 TNNI1P19237 187 aa15.49■□□□□ 0.07
SKA2-205ENST00000580541 GTF2H1P32780 548 aa15.49■□□□□ 0.07
SKA2-205ENST00000580541 TNFSF9P41273 254 aa15.49■□□□□ 0.07
SKA2-205ENST00000580541 MTIF2P46199 727 aaKnown RBP15.49■□□□□ 0.07
SKA2-205ENST00000580541 CASP4P49662 377 aa15.49■□□□□ 0.07
SKA2-205ENST00000580541 EPHB4P54760 987 aa15.49■□□□□ 0.07
SKA2-205ENST00000580541 CETN1Q12798 172 aa15.49■□□□□ 0.07
SKA2-205ENST00000580541 BFSP1Q12934 665 aa15.49■□□□□ 0.07
SKA2-205ENST00000580541 IQCB1Q15051 598 aa15.49■□□□□ 0.07
SKA2-205ENST00000580541 DUOXA2Q1HG44 320 aa15.49■□□□□ 0.07
SKA2-205ENST00000580541 TCTN1Q2MV58 587 aa15.49■□□□□ 0.07
SKA2-205ENST00000580541 SEZ6Q53EL9 994 aa15.49■□□□□ 0.07
SKA2-205ENST00000580541 XKR4Q5GH76 650 aa15.49■□□□□ 0.07
SKA2-205ENST00000580541 NOMO2Q5JPE7 1267 aa15.49■□□□□ 0.07
SKA2-205ENST00000580541 AGMOQ6ZNB7 445 aa15.49■□□□□ 0.07
SKA2-205ENST00000580541 DHX40Q8IX18 779 aaKnown RBP15.49■□□□□ 0.07
SKA2-205ENST00000580541 EEF2KMTQ96G04 330 aa15.49■□□□□ 0.07
SKA2-205ENST00000580541 ANKRD36BP1Q96IX9 119 aa15.49■□□□□ 0.07
SKA2-205ENST00000580541 SNX27Q96L92 541 aa15.49■□□□□ 0.07
SKA2-205ENST00000580541 RNPC3Q96LT9 517 aaKnown RBP15.49■□□□□ 0.07
SKA2-205ENST00000580541 CNTN3Q9P232 1028 aa15.49■□□□□ 0.07
SKA2-205ENST00000580541 INSL6Q9Y581 213 aa15.49■□□□□ 0.07
SKA2-205ENST00000580541 KCNJ18B7U540 433 aa15.48■□□□□ 0.07
SKA2-205ENST00000580541 INPPL1O15357 1258 aa15.48■□□□□ 0.07
SKA2-205ENST00000580541 DGKIO75912 1065 aa15.48■□□□□ 0.07
SKA2-205ENST00000580541 TNNC2P02585 160 aa15.48■□□□□ 0.07
SKA2-205ENST00000580541 DLATP10515 647 aaKnown RBP15.48■□□□□ 0.07
SKA2-205ENST00000580541 ATP2A2P16615 1042 aaKnown RBP15.48■□□□□ 0.07
SKA2-205ENST00000580541 ATF7P17544 494 aaPredicted RBP15.48■□□□□ 0.07
SKA2-205ENST00000580541 RNASELQ05823 741 aaKnown RBP15.48■□□□□ 0.07
SKA2-205ENST00000580541 KCNJ12Q14500 433 aa15.48■□□□□ 0.07
SKA2-205ENST00000580541 TMEM132DQ14C87 1099 aa15.48■□□□□ 0.07
SKA2-205ENST00000580541 TCP11X2Q5H9J9 407 aa15.48■□□□□ 0.07
SKA2-205ENST00000580541 TCERG1LQ5VWI1 586 aa15.48■□□□□ 0.07
SKA2-205ENST00000580541 WDR49Q8IV35 697 aa15.48■□□□□ 0.07
SKA2-205ENST00000580541 CRIPAKQ8N1N5 446 aa15.48■□□□□ 0.07
SKA2-205ENST00000580541 BEST2Q8NFU1 509 aa15.48■□□□□ 0.07
SKA2-205ENST00000580541 PARD3BQ8TEW8 1205 aa15.48■□□□□ 0.07
SKA2-205ENST00000580541 LPPQ93052 612 aa15.48■□□□□ 0.07
SKA2-205ENST00000580541 CCDC127Q96BQ5 260 aa15.48■□□□□ 0.07
SKA2-205ENST00000580541 KIF12Q96FN5 646 aa15.48■□□□□ 0.07
SKA2-205ENST00000580541 CNOT6LQ96LI5 555 aaKnown RBP15.48■□□□□ 0.07
SKA2-205ENST00000580541 MED15Q96RN5 788 aa15.48■□□□□ 0.07
SKA2-205ENST00000580541 YME1L1Q96TA2 773 aa15.48■□□□□ 0.07
SKA2-205ENST00000580541 GAD1Q99259 594 aa15.48■□□□□ 0.07
SKA2-205ENST00000580541 PDE11AQ9HCR9 933 aa15.48■□□□□ 0.07
SKA2-205ENST00000580541 KLK14Q9P0G3 267 aa15.48■□□□□ 0.07
SKA2-205ENST00000580541 UBQLN1Q9UMX0 589 aaKnown RBP15.48■□□□□ 0.07
SKA2-205ENST00000580541 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.48■□□□□ 0.07
SKA2-205ENST00000580541 PDE4DIPQ5VU43 2346 aa15.48■□□□□ 0.07
SKA2-205ENST00000580541 SMIM28A0A1B0GU29 152 aa15.47■□□□□ 0.07
SKA2-205ENST00000580541 N4BP1O75113 896 aaKnown RBP15.47■□□□□ 0.07
SKA2-205ENST00000580541 GJB5O95377 273 aa15.47■□□□□ 0.07
SKA2-205ENST00000580541 TMEM191BP0C7N4 346 aa15.47■□□□□ 0.07
SKA2-205ENST00000580541 CYP3A5P20815 502 aa15.47■□□□□ 0.07
SKA2-205ENST00000580541 MLH1P40692 756 aa15.47■□□□□ 0.07
SKA2-205ENST00000580541 MCCD1P59942 119 aaPredicted RBP15.47■□□□□ 0.07
SKA2-205ENST00000580541 GRIK3Q13003 919 aa15.47■□□□□ 0.07
SKA2-205ENST00000580541 FILIP1LQ4L180 1135 aa15.47■□□□□ 0.07
SKA2-205ENST00000580541 ZBTB41Q5SVQ8 909 aa15.47■□□□□ 0.07
SKA2-205ENST00000580541 RASIP1Q5U651 963 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms