RNA–Protein interactions for RNA: ENST00000579466.1

MSI2-208, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 186 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-208	ENST00000579466	LAMTOR5	O43504	91 aa		10.64	□□□□□ -0.71
MSI2-208	ENST00000579466	NEMF	O60524	1076 aa		10.64	□□□□□ -0.71
MSI2-208	ENST00000579466	KIN	O60870	393 aa	Known RBP	10.64	□□□□□ -0.71
MSI2-208	ENST00000579466	XYLB	O75191	536 aa		10.64	□□□□□ -0.71
MSI2-208	ENST00000579466	RECQL4	O94761	1208 aa		10.64	□□□□□ -0.71
MSI2-208	ENST00000579466	CTDNEP1	O95476	244 aa		10.64	□□□□□ -0.71
MSI2-208	ENST00000579466	MLF2	Q15773	248 aa	Predicted RBP	10.64	□□□□□ -0.71
MSI2-208	ENST00000579466	ZBTB8OS	Q8IWT0	167 aa		10.64	□□□□□ -0.71
MSI2-208	ENST00000579466	FAM177A1	Q8N128	213 aa	Predicted RBP	10.64	□□□□□ -0.71
MSI2-208	ENST00000579466	NECAB1	Q8N987	351 aa		10.64	□□□□□ -0.71
MSI2-208	ENST00000579466	LNX1	Q8TBB1	728 aa	Predicted RBP	10.64	□□□□□ -0.71
MSI2-208	ENST00000579466	PIK3R5	Q8WYR1	880 aa		10.64	□□□□□ -0.71
MSI2-208	ENST00000579466	BSND	Q8WZ55	320 aa		10.64	□□□□□ -0.71
MSI2-208	ENST00000579466	RUBCN	Q92622	972 aa		10.64	□□□□□ -0.71
MSI2-208	ENST00000579466	SHD	Q96IW2	340 aa		10.64	□□□□□ -0.71
MSI2-208	ENST00000579466	HSD17B14	Q9BPX1	270 aa		10.64	□□□□□ -0.71
MSI2-208	ENST00000579466	BCO2	Q9BYV7	579 aa		10.64	□□□□□ -0.71
MSI2-208	ENST00000579466	PDZD7	Q9H5P4	517 aa		10.64	□□□□□ -0.71
MSI2-208	ENST00000579466	POLD4	Q9HCU8	107 aa		10.64	□□□□□ -0.71
MSI2-208	ENST00000579466	BRMS1	Q9HCU9	246 aa		10.64	□□□□□ -0.71
MSI2-208	ENST00000579466	ANKEF1	Q9NU02	776 aa		10.64	□□□□□ -0.71
MSI2-208	ENST00000579466	NCDN	Q9UBB6	729 aa		10.64	□□□□□ -0.71
MSI2-208	ENST00000579466	KANSL1L	A0AUZ9	987 aa		10.63	□□□□□ -0.71
MSI2-208	ENST00000579466	PFKFB2	O60825	505 aa		10.63	□□□□□ -0.71
MSI2-208	ENST00000579466	LYPLA2	O95372	231 aa		10.63	□□□□□ -0.71
MSI2-208	ENST00000579466	EDN1	P05305	212 aa		10.63	□□□□□ -0.71
MSI2-208	ENST00000579466	PRKCB	P05771	671 aa		10.63	□□□□□ -0.71
MSI2-208	ENST00000579466	TH	P07101	528 aa		10.63	□□□□□ -0.71
MSI2-208	ENST00000579466	HNRNPA1	P09651	372 aa	Known RBP eCLIP	10.63	□□□□□ -0.71
MSI2-208	ENST00000579466	IGFBP6	P24592	240 aa	Predicted RBP	10.63	□□□□□ -0.71
MSI2-208	ENST00000579466	OR1D2	P34982	312 aa		10.63	□□□□□ -0.71
MSI2-208	ENST00000579466	STARD6	P59095	220 aa		10.63	□□□□□ -0.71
MSI2-208	ENST00000579466	CSTF1	Q05048	431 aa	Known RBP	10.63	□□□□□ -0.71
MSI2-208	ENST00000579466	PRPF4B	Q13523	1007 aa	Known RBP	10.63	□□□□□ -0.71
MSI2-208	ENST00000579466	PABPC1L	Q4VXU2	614 aa	Known RBP	10.63	□□□□□ -0.71
MSI2-208	ENST00000579466	SLC44A4	Q53GD3	710 aa		10.63	□□□□□ -0.71
MSI2-208	ENST00000579466	AXDND1	Q5T1B0	1012 aa	Predicted RBP	10.63	□□□□□ -0.71
MSI2-208	ENST00000579466	EEF1DP3	Q658K8	133 aa		10.63	□□□□□ -0.71
MSI2-208	ENST00000579466	TSSK4	Q6SA08	328 aa		10.63	□□□□□ -0.71
MSI2-208	ENST00000579466	TPRG1	Q6ZUI0	275 aa		10.63	□□□□□ -0.71
MSI2-208	ENST00000579466	MTSS1L	Q765P7	747 aa		10.63	□□□□□ -0.71
MSI2-208	ENST00000579466	NPAS3	Q8IXF0	933 aa		10.63	□□□□□ -0.71
MSI2-208	ENST00000579466	MAML2	Q8IZL2	1156 aa	Predicted RBP	10.63	□□□□□ -0.71
MSI2-208	ENST00000579466	TNFRSF25	Q93038	417 aa		10.63	□□□□□ -0.71
MSI2-208	ENST00000579466	MCRS1	Q96EZ8	462 aa		10.63	□□□□□ -0.71
MSI2-208	ENST00000579466	KIFC3	Q9BVG8	833 aa		10.63	□□□□□ -0.71
MSI2-208	ENST00000579466	NFKBIZ	Q9BYH8	718 aa		10.63	□□□□□ -0.71
MSI2-208	ENST00000579466	TM6SF1	Q9BZW5	370 aa		10.63	□□□□□ -0.71
MSI2-208	ENST00000579466	GOLGA2P5	Q9HBQ8	144 aa		10.63	□□□□□ -0.71
MSI2-208	ENST00000579466	PRMT7	Q9NVM4	692 aa	Predicted RBP	10.63	□□□□□ -0.71
MSI2-208	ENST00000579466	CDY1	Q9Y6F8	540 aa		10.63	□□□□□ -0.71
MSI2-208	ENST00000579466	TICRR	Q7Z2Z1	1910 aa		10.62	□□□□□ -0.71
MSI2-208	ENST00000579466	FAM170B	A6NMN3	283 aa		10.62	□□□□□ -0.71
MSI2-208	ENST00000579466	BTBD18	B2RXH4	712 aa		10.62	□□□□□ -0.71
MSI2-208	ENST00000579466	N4BP3	O15049	544 aa		10.62	□□□□□ -0.71
MSI2-208	ENST00000579466	MED24	O75448	989 aa		10.62	□□□□□ -0.71
MSI2-208	ENST00000579466	LARGE1	O95461	756 aa		10.62	□□□□□ -0.71
MSI2-208	ENST00000579466	FDPS	P14324	419 aa	Known RBP	10.62	□□□□□ -0.71
MSI2-208	ENST00000579466	TKT	P29401	623 aa	Known RBP	10.62	□□□□□ -0.71
MSI2-208	ENST00000579466	MCM7	P33993	719 aa		10.62	□□□□□ -0.71
MSI2-208	ENST00000579466	ARPP19	P56211	112 aa		10.62	□□□□□ -0.71
MSI2-208	ENST00000579466	POU5F1B	Q06416	359 aa		10.62	□□□□□ -0.71
MSI2-208	ENST00000579466	PUM1	Q14671	1186 aa	Known RBP eCLIP	10.62	□□□□□ -0.71
MSI2-208	ENST00000579466	RSPO4	Q2I0M5	234 aa	Predicted RBP	10.62	□□□□□ -0.71
MSI2-208	ENST00000579466	DIS3L2	Q8IYB7	885 aa	Known RBP	10.62	□□□□□ -0.71
MSI2-208	ENST00000579466	SUMF1	Q8NBK3	374 aa		10.62	□□□□□ -0.71
MSI2-208	ENST00000579466	WASF1	Q92558	559 aa		10.62	□□□□□ -0.71
MSI2-208	ENST00000579466	ADPGK	Q9BRR6	497 aa		10.62	□□□□□ -0.71
MSI2-208	ENST00000579466	TMEM60	Q9H2L4	133 aa		10.62	□□□□□ -0.71
MSI2-208	ENST00000579466	LTB4R2	Q9NPC1	389 aa		10.62	□□□□□ -0.71
MSI2-208	ENST00000579466	DNMT3B	Q9UBC3	853 aa	Known RBP	10.62	□□□□□ -0.71
MSI2-208	ENST00000579466	MRPS23	Q9Y3D9	190 aa	Known RBP	10.62	□□□□□ -0.71
MSI2-208	ENST00000579466	ZFP37	Q9Y6Q3	630 aa	Predicted RBP	10.62	□□□□□ -0.71
MSI2-208	ENST00000579466	ZMYM2	Q9UBW7	1377 aa		10.62	□□□□□ -0.71
MSI2-208	ENST00000579466	CACNA1B	Q00975	2339 aa		10.61	□□□□□ -0.71
MSI2-208	ENST00000579466	JAK2	O60674	1132 aa		10.61	□□□□□ -0.71
MSI2-208	ENST00000579466	B3GAT3	O94766	335 aa		10.61	□□□□□ -0.71
MSI2-208	ENST00000579466	PAPLN	O95428	1278 aa		10.61	□□□□□ -0.71
MSI2-208	ENST00000579466	SPATA31C1	P0DKV0	1188 aa		10.61	□□□□□ -0.71
MSI2-208	ENST00000579466	CEBPB	P17676	345 aa		10.61	□□□□□ -0.71
MSI2-208	ENST00000579466	TARS	P26639	723 aa	Known RBP	10.61	□□□□□ -0.71
MSI2-208	ENST00000579466	BRCC3	P46736	316 aa		10.61	□□□□□ -0.71
MSI2-208	ENST00000579466	CLCNKB	P51801	687 aa		10.61	□□□□□ -0.71
MSI2-208	ENST00000579466	GUCY1B3	Q02153	619 aa		10.61	□□□□□ -0.71
MSI2-208	ENST00000579466	ELAVL2	Q12926	359 aa	Known RBP	10.61	□□□□□ -0.71
MSI2-208	ENST00000579466	GRM2	Q14416	872 aa		10.61	□□□□□ -0.71
MSI2-208	ENST00000579466	NAB2	Q15742	525 aa		10.61	□□□□□ -0.71
MSI2-208	ENST00000579466	MAPK6	Q16659	721 aa		10.61	□□□□□ -0.71
MSI2-208	ENST00000579466	SLC5A9	Q2M3M2	681 aa		10.61	□□□□□ -0.71
MSI2-208	ENST00000579466	CDCA2	Q69YH5	1023 aa	Predicted RBP	10.61	□□□□□ -0.71
MSI2-208	ENST00000579466	RSPO2	Q6UXX9	243 aa	Predicted RBP	10.61	□□□□□ -0.71
MSI2-208	ENST00000579466	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	10.61	□□□□□ -0.71
MSI2-208	ENST00000579466	PPP4R3CP	Q6ZMV5	832 aa		10.61	□□□□□ -0.71
MSI2-208	ENST00000579466	CATSPER3	Q86XQ3	398 aa		10.61	□□□□□ -0.71
MSI2-208	ENST00000579466	GPR65	Q8IYL9	337 aa		10.61	□□□□□ -0.71
MSI2-208	ENST00000579466	MCPH1	Q8NEM0	835 aa		10.61	□□□□□ -0.71
MSI2-208	ENST00000579466	DEPTOR	Q8TB45	409 aa		10.61	□□□□□ -0.71
MSI2-208	ENST00000579466	PRIMPOL	Q96LW4	560 aa		10.61	□□□□□ -0.71
MSI2-208	ENST00000579466	PLA2G2F	Q9BZM2	168 aa		10.61	□□□□□ -0.71
MSI2-208	ENST00000579466	FZD8	Q9H461	694 aa		10.61	□□□□□ -0.71

Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms