RNA–Protein interactions for RNA: ENST00000578525.5

CDK5RAP3-208, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 564 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-208ENST00000578525 GRIN2DO15399 1336 aa10.03□□□□□ -0.8
CDK5RAP3-208ENST00000578525 PAPPA2Q9BXP8 1791 aa10.02□□□□□ -0.81
CDK5RAP3-208ENST00000578525 IGKV6D-21A0A0A0MT36 114 aa10.02□□□□□ -0.81
CDK5RAP3-208ENST00000578525 FAM170AA1A519 330 aa10.02□□□□□ -0.81
CDK5RAP3-208ENST00000578525 ATMINO43313 823 aaPredicted RBP10.02□□□□□ -0.81
CDK5RAP3-208ENST00000578525 SPOPO43791 374 aa10.02□□□□□ -0.81
CDK5RAP3-208ENST00000578525 ERLIN2O94905 339 aa10.02□□□□□ -0.81
CDK5RAP3-208ENST00000578525 LDHAP00338 332 aaKnown RBP10.02□□□□□ -0.81
CDK5RAP3-208ENST00000578525 HLA-DRAP01903 254 aa10.02□□□□□ -0.81
CDK5RAP3-208ENST00000578525 KRT14P02533 472 aa10.02□□□□□ -0.81
CDK5RAP3-208ENST00000578525 C4BPAP04003 597 aaKnown RBP10.02□□□□□ -0.81
CDK5RAP3-208ENST00000578525 MYBL1P10243 752 aa10.02□□□□□ -0.81
CDK5RAP3-208ENST00000578525 ATP4AP20648 1035 aa10.02□□□□□ -0.81
CDK5RAP3-208ENST00000578525 GLRA2P23416 452 aa10.02□□□□□ -0.81
CDK5RAP3-208ENST00000578525 GBP1P32455 592 aa10.02□□□□□ -0.81
CDK5RAP3-208ENST00000578525 PIK3CAP42336 1068 aa10.02□□□□□ -0.81
CDK5RAP3-208ENST00000578525 ALDH5A1P51649 535 aaPredicted RBP10.02□□□□□ -0.81
CDK5RAP3-208ENST00000578525 DRG2P55039 364 aaKnown RBP10.02□□□□□ -0.81
CDK5RAP3-208ENST00000578525 BPIFB4P59827 614 aa10.02□□□□□ -0.81
CDK5RAP3-208ENST00000578525 SP2Q02086 613 aa10.02□□□□□ -0.81
CDK5RAP3-208ENST00000578525 CYP1B1Q16678 543 aa10.02□□□□□ -0.81
CDK5RAP3-208ENST00000578525 ZACNQ401N2 412 aa10.02□□□□□ -0.81
CDK5RAP3-208ENST00000578525 FOXR1Q6PIV2 292 aa10.02□□□□□ -0.81
CDK5RAP3-208ENST00000578525 LBX2Q6XYB7 198 aa10.02□□□□□ -0.81
CDK5RAP3-208ENST00000578525 RUFY4Q6ZNE9 571 aa10.02□□□□□ -0.81
CDK5RAP3-208ENST00000578525 TMC3Q7Z5M5 1100 aa10.02□□□□□ -0.81
CDK5RAP3-208ENST00000578525 RIOX2Q8IUF8 465 aa10.02□□□□□ -0.81
CDK5RAP3-208ENST00000578525 PRELID2Q8N945 189 aa10.02□□□□□ -0.81
CDK5RAP3-208ENST00000578525 UBLCP1Q8WVY7 318 aaPredicted RBP10.02□□□□□ -0.81
CDK5RAP3-208ENST00000578525 ZNF516Q92618 1163 aa10.02□□□□□ -0.81
CDK5RAP3-208ENST00000578525 FNBP1Q96RU3 617 aa10.02□□□□□ -0.81
CDK5RAP3-208ENST00000578525 CGRRF1Q99675 332 aa10.02□□□□□ -0.81
CDK5RAP3-208ENST00000578525 ERP44Q9BS26 406 aa10.02□□□□□ -0.81
CDK5RAP3-208ENST00000578525 PORCNQ9H237 461 aa10.02□□□□□ -0.81
CDK5RAP3-208ENST00000578525 DHX33Q9H6R0 707 aaKnown RBP10.02□□□□□ -0.81
CDK5RAP3-208ENST00000578525 TMEM134Q9H6X4 195 aa10.02□□□□□ -0.81
CDK5RAP3-208ENST00000578525 CNOT8Q9UFF9 292 aaKnown RBP10.02□□□□□ -0.81
CDK5RAP3-208ENST00000578525 AGO2Q9UKV8 859 aaKnown RBP10.02□□□□□ -0.81
CDK5RAP3-208ENST00000578525 PCDHA3Q9Y5H8 950 aa10.02□□□□□ -0.81
CDK5RAP3-208ENST00000578525 SNCAIPQ9Y6H5 919 aa10.02□□□□□ -0.81
CDK5RAP3-208ENST00000578525 LRRC37A2A6NM11 1700 aa10.02□□□□□ -0.81
CDK5RAP3-208ENST00000578525 LRRIQ4A6NIV6 560 aa10.01□□□□□ -0.81
CDK5RAP3-208ENST00000578525 GRIN3BO60391 1043 aa10.01□□□□□ -0.81
CDK5RAP3-208ENST00000578525 PPFIA2O75334 1257 aa10.01□□□□□ -0.81
CDK5RAP3-208ENST00000578525 USP2O75604 605 aaPredicted RBP10.01□□□□□ -0.81
CDK5RAP3-208ENST00000578525 MYZAPP0CAP1 466 aa10.01□□□□□ -0.81
CDK5RAP3-208ENST00000578525 NR1D1P20393 614 aa10.01□□□□□ -0.81
CDK5RAP3-208ENST00000578525 COPB2P35606 906 aa10.01□□□□□ -0.81
CDK5RAP3-208ENST00000578525 FLT3P36888 993 aa10.01□□□□□ -0.81
CDK5RAP3-208ENST00000578525 RWDD2BP57060 319 aa10.01□□□□□ -0.81
CDK5RAP3-208ENST00000578525 NLRP11P59045 1033 aaKnown RBP10.01□□□□□ -0.81
CDK5RAP3-208ENST00000578525 CNTN2Q02246 1040 aa10.01□□□□□ -0.81
CDK5RAP3-208ENST00000578525 ZNF844Q08AG5 666 aa10.01□□□□□ -0.81
CDK5RAP3-208ENST00000578525 BIRC3Q13489 604 aa10.01□□□□□ -0.81
CDK5RAP3-208ENST00000578525 TDRD10Q5VZ19 366 aaKnown RBP10.01□□□□□ -0.81
CDK5RAP3-208ENST00000578525 FAM160B1Q5W0V3 765 aa10.01□□□□□ -0.81
CDK5RAP3-208ENST00000578525 KCTD16Q68DU8 428 aa10.01□□□□□ -0.81
CDK5RAP3-208ENST00000578525 AADACL2Q6P093 401 aa10.01□□□□□ -0.81
CDK5RAP3-208ENST00000578525 TRIM72Q6ZMU5 477 aa10.01□□□□□ -0.81
CDK5RAP3-208ENST00000578525 SEPT14Q6ZU15 432 aa10.01□□□□□ -0.81
CDK5RAP3-208ENST00000578525 CYFIP1Q7L576 1253 aa10.01□□□□□ -0.81
CDK5RAP3-208ENST00000578525 ADAT2Q7Z6V5 191 aaKnown RBP10.01□□□□□ -0.81
CDK5RAP3-208ENST00000578525 SLC13A5Q86YT5 568 aaPredicted RBP10.01□□□□□ -0.81
CDK5RAP3-208ENST00000578525 MCOLN2Q8IZK6 566 aa10.01□□□□□ -0.81
CDK5RAP3-208ENST00000578525 ANKRD35Q8N283 1001 aa10.01□□□□□ -0.81
CDK5RAP3-208ENST00000578525 ARFGAP2Q8N6H7 521 aa10.01□□□□□ -0.81
CDK5RAP3-208ENST00000578525 C12orf50Q8NA57 414 aaPredicted RBP10.01□□□□□ -0.81
CDK5RAP3-208ENST00000578525 MAGOHBQ96A72 148 aaKnown RBP10.01□□□□□ -0.81
CDK5RAP3-208ENST00000578525 TMEM143Q96AN5 459 aa10.01□□□□□ -0.81
CDK5RAP3-208ENST00000578525 CEP89Q96ST8 783 aa10.01□□□□□ -0.81
CDK5RAP3-208ENST00000578525 FMO2Q99518 471 aa10.01□□□□□ -0.81
CDK5RAP3-208ENST00000578525 PI4K2AQ9BTU6 479 aa10.01□□□□□ -0.81
CDK5RAP3-208ENST00000578525 TXLNGYQ9BZA5 131 aa10.01□□□□□ -0.81
CDK5RAP3-208ENST00000578525 ACP6Q9NPH0 428 aa10.01□□□□□ -0.81
CDK5RAP3-208ENST00000578525 NRBP2Q9NSY0 501 aa10.01□□□□□ -0.81
CDK5RAP3-208ENST00000578525 ZDHHC18Q9NUE0 388 aa10.01□□□□□ -0.81
CDK5RAP3-208ENST00000578525 PARP2Q9UGN5 583 aa10.01□□□□□ -0.81
CDK5RAP3-208ENST00000578525 PCYOX1Q9UHG3 505 aa10.01□□□□□ -0.81
CDK5RAP3-208ENST00000578525 MTUS1Q9ULD2 1270 aa10.01□□□□□ -0.81
CDK5RAP3-208ENST00000578525 RRP15Q9Y3B9 282 aaKnown RBP10.01□□□□□ -0.81
CDK5RAP3-208ENST00000578525 PPME1Q9Y570 386 aa10.01□□□□□ -0.81
CDK5RAP3-208ENST00000578525 EP400Q96L91 3159 aa10□□□□□ -0.81
CDK5RAP3-208ENST00000578525 GSTTP1A0A1W2PQM5 241 aa10□□□□□ -0.81
CDK5RAP3-208ENST00000578525 SRRM3A6NNA2 597 aaPredicted RBP10□□□□□ -0.81
CDK5RAP3-208ENST00000578525 K7ERI5 159 aa10□□□□□ -0.81
CDK5RAP3-208ENST00000578525 MYO1FO00160 1098 aa10□□□□□ -0.81
CDK5RAP3-208ENST00000578525 TULP2O00295 520 aa10□□□□□ -0.81
CDK5RAP3-208ENST00000578525 PODXLO00592 558 aa10□□□□□ -0.81
CDK5RAP3-208ENST00000578525 VNN1O95497 513 aa10□□□□□ -0.81
CDK5RAP3-208ENST00000578525 CYP1A1P04798 512 aaPredicted RBP10□□□□□ -0.81
CDK5RAP3-208ENST00000578525 PYGMP11217 842 aa10□□□□□ -0.81
CDK5RAP3-208ENST00000578525 UNGP13051 313 aaPredicted RBP10□□□□□ -0.81
CDK5RAP3-208ENST00000578525 TNNI1P19237 187 aa10□□□□□ -0.81
CDK5RAP3-208ENST00000578525 UBA1P22314 1058 aaKnown RBP10□□□□□ -0.81
CDK5RAP3-208ENST00000578525 EDNRBP24530 442 aa10□□□□□ -0.81
CDK5RAP3-208ENST00000578525 COILP38432 576 aaPredicted RBP10□□□□□ -0.81
CDK5RAP3-208ENST00000578525 FNTAP49354 379 aa10□□□□□ -0.81
CDK5RAP3-208ENST00000578525 HIRAP54198 1017 aaPredicted RBP10□□□□□ -0.81
CDK5RAP3-208ENST00000578525 EIF3BP55884 814 aaKnown RBP10□□□□□ -0.81
CDK5RAP3-208ENST00000578525 DHX9Q08211 1270 aaKnown RBP10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms