RNA–Protein interactions for RNA: ENST00000578415.1

TSEN54-205, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 3

Gene TSEN54, Length 994 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-205ENST00000578415 FGF13Q92913 245 aa23.2■■□□□ 1.3
TSEN54-205ENST00000578415 N4BP3O15049 544 aa23.19■■□□□ 1.3
TSEN54-205ENST00000578415 CCL16O15467 120 aa23.19■■□□□ 1.3
TSEN54-205ENST00000578415 MED24O75448 989 aa23.19■■□□□ 1.3
TSEN54-205ENST00000578415 EDN1P05305 212 aa23.19■■□□□ 1.3
TSEN54-205ENST00000578415 HOXA9P31269 272 aa23.19■■□□□ 1.3
TSEN54-205ENST00000578415 ME3Q16798 604 aa23.19■■□□□ 1.3
TSEN54-205ENST00000578415 MAML2Q8IZL2 1156 aaPredicted RBP23.19■■□□□ 1.3
TSEN54-205ENST00000578415 NSUN7Q8NE18 718 aaKnown RBP23.19■■□□□ 1.3
TSEN54-205ENST00000578415 ITFG1Q8TB96 612 aa23.19■■□□□ 1.3
TSEN54-205ENST00000578415 GTF3C6Q969F1 213 aa23.19■■□□□ 1.3
TSEN54-205ENST00000578415 ATP2B1P20020 1258 aa23.18■■□□□ 1.3
TSEN54-205ENST00000578415 IGFBP6P24592 240 aaPredicted RBP23.18■■□□□ 1.3
TSEN54-205ENST00000578415 FOSBP53539 338 aa23.18■■□□□ 1.3
TSEN54-205ENST00000578415 ANKRD1Q15327 319 aa23.18■■□□□ 1.3
TSEN54-205ENST00000578415 EEF1DP3Q658K8 133 aa23.18■■□□□ 1.3
TSEN54-205ENST00000578415 NOSTRINQ8IVI9 506 aa23.18■■□□□ 1.3
TSEN54-205ENST00000578415 SLC7A14Q8TBB6 771 aa23.18■■□□□ 1.3
TSEN54-205ENST00000578415 RMDN1Q96DB5 314 aa23.18■■□□□ 1.3
TSEN54-205ENST00000578415 DDX23Q9BUQ8 820 aaKnown RBP23.18■■□□□ 1.3
TSEN54-205ENST00000578415 CCDC113Q9H0I3 377 aa23.18■■□□□ 1.3
TSEN54-205ENST00000578415 TUFT1Q9NNX1 390 aa23.18■■□□□ 1.3
TSEN54-205ENST00000578415 DOCK6Q96HP0 2047 aa23.18■■□□□ 1.3
TSEN54-205ENST00000578415 COL4A3Q01955 1670 aa23.17■■□□□ 1.3
TSEN54-205ENST00000578415 PRKCBP05771 671 aa23.17■■□□□ 1.3
TSEN54-205ENST00000578415 ELAVL2Q12926 359 aaKnown RBP23.17■■□□□ 1.3
TSEN54-205ENST00000578415 PRPF4BQ13523 1007 aaKnown RBP23.17■■□□□ 1.3
TSEN54-205ENST00000578415 SNW1Q13573 536 aaKnown RBP23.17■■□□□ 1.3
TSEN54-205ENST00000578415 ZC3H14Q6PJT7 736 aaKnown RBP23.17■■□□□ 1.3
TSEN54-205ENST00000578415 SHDQ96IW2 340 aa23.17■■□□□ 1.3
TSEN54-205ENST00000578415 C2orf40Q9H1Z8 148 aa23.17■■□□□ 1.3
TSEN54-205ENST00000578415 POLIQ9UNA4 740 aa23.17■■□□□ 1.3
TSEN54-205ENST00000578415 OTOGLQ3ZCN5 2332 aa23.17■■□□□ 1.3
TSEN54-205ENST00000578415 ACKR2O00590 384 aa23.16■■□□□ 1.3
TSEN54-205ENST00000578415 JAK2O60674 1132 aa23.16■■□□□ 1.3
TSEN54-205ENST00000578415 XYLBO75191 536 aa23.16■■□□□ 1.3
TSEN54-205ENST00000578415 POU2F2P09086 479 aa23.16■■□□□ 1.3
TSEN54-205ENST00000578415 RAB33AQ14088 237 aa23.16■■□□□ 1.3
TSEN54-205ENST00000578415 MAPK6Q16659 721 aa23.16■■□□□ 1.3
TSEN54-205ENST00000578415 PDXDC1Q6P996 788 aa23.16■■□□□ 1.3
TSEN54-205ENST00000578415 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.16■■□□□ 1.3
TSEN54-205ENST00000578415 MTSS1LQ765P7 747 aa23.16■■□□□ 1.3
TSEN54-205ENST00000578415 KIAA2013Q8IYS2 634 aa23.16■■□□□ 1.3
TSEN54-205ENST00000578415 NACC1Q96RE7 527 aa23.16■■□□□ 1.3
TSEN54-205ENST00000578415 HCFC1R1Q9NWW0 138 aa23.16■■□□□ 1.3
TSEN54-205ENST00000578415 DMXL1Q9Y485 3027 aa23.15■■□□□ 1.3
TSEN54-205ENST00000578415 KANSL1LA0AUZ9 987 aa23.15■■□□□ 1.3
TSEN54-205ENST00000578415 FGFR3P22607 806 aa23.15■■□□□ 1.3
TSEN54-205ENST00000578415 MCM7P33993 719 aa23.15■■□□□ 1.3
TSEN54-205ENST00000578415 OR1D2P34982 312 aa23.15■■□□□ 1.3
TSEN54-205ENST00000578415 NAMPTP43490 491 aa23.15■■□□□ 1.3
TSEN54-205ENST00000578415 ANAPC15P60006 121 aa23.15■■□□□ 1.3
TSEN54-205ENST00000578415 MLF2Q15773 248 aaPredicted RBP23.15■■□□□ 1.3
TSEN54-205ENST00000578415 TMEM132AQ24JP5 1023 aa23.15■■□□□ 1.3
TSEN54-205ENST00000578415 AXDND1Q5T1B0 1012 aaPredicted RBP23.15■■□□□ 1.3
TSEN54-205ENST00000578415 RSPO2Q6UXX9 243 aaPredicted RBP23.15■■□□□ 1.3
TSEN54-205ENST00000578415 NPAS3Q8IXF0 933 aa23.15■■□□□ 1.3
TSEN54-205ENST00000578415 ADPGKQ9BRR6 497 aa23.15■■□□□ 1.3
TSEN54-205ENST00000578415 POLR3CQ9BUI4 534 aaPredicted RBP23.15■■□□□ 1.3
TSEN54-205ENST00000578415 DNMT3BQ9UBC3 853 aaKnown RBP23.15■■□□□ 1.3
TSEN54-205ENST00000578415 MTRRQ9UBK8 725 aa23.15■■□□□ 1.3
TSEN54-205ENST00000578415 GDAQ9Y2T3 454 aa23.15■■□□□ 1.3
TSEN54-205ENST00000578415 GPR179Q6PRD1 2367 aa23.15■■□□□ 1.3
TSEN54-205ENST00000578415 TMEM189-UBE2V1I3L0A0 370 aa23.14■■□□□ 1.29
TSEN54-205ENST00000578415 LIG1P18858 919 aa23.14■■□□□ 1.29
TSEN54-205ENST00000578415 CYP11B2P19099 503 aa23.14■■□□□ 1.29
TSEN54-205ENST00000578415 UVSSAQ2YD98 709 aa23.14■■□□□ 1.29
TSEN54-205ENST00000578415 SLC44A4Q53GD3 710 aa23.14■■□□□ 1.29
TSEN54-205ENST00000578415 PADI6Q6TGC4 694 aa23.14■■□□□ 1.29
TSEN54-205ENST00000578415 CD300LGQ6UXG3 332 aa23.14■■□□□ 1.29
TSEN54-205ENST00000578415 PPP1R10Q96QC0 940 aaKnown RBP23.14■■□□□ 1.29
TSEN54-205ENST00000578415 KXD1Q9BQD3 176 aa23.14■■□□□ 1.29
TSEN54-205ENST00000578415 KIFC3Q9BVG8 833 aa23.14■■□□□ 1.29
TSEN54-205ENST00000578415 MTF2Q9Y483 593 aaPredicted RBP23.14■■□□□ 1.29
TSEN54-205ENST00000578415 DNAH14Q0VDD8 3507 aa23.13■■□□□ 1.29
TSEN54-205ENST00000578415 CACNA1IQ9P0X4 2223 aa23.13■■□□□ 1.29
TSEN54-205ENST00000578415 B3GAT3O94766 335 aa23.13■■□□□ 1.29
TSEN54-205ENST00000578415 RBM25P49756 843 aaKnown RBP23.13■■□□□ 1.29
TSEN54-205ENST00000578415 PRKCQQ04759 706 aa23.13■■□□□ 1.29
TSEN54-205ENST00000578415 GLRA4Q5JXX5 417 aa23.13■■□□□ 1.29
TSEN54-205ENST00000578415 SUMF1Q8NBK3 374 aa23.13■■□□□ 1.29
TSEN54-205ENST00000578415 DEPTORQ8TB45 409 aa23.13■■□□□ 1.29
TSEN54-205ENST00000578415 VWA8A3KMH1 1905 aa23.13■■□□□ 1.29
TSEN54-205ENST00000578415 MYH15Q9Y2K3 1946 aa23.13■■□□□ 1.29
TSEN54-205ENST00000578415 ARHGEF35A5YM69 484 aa23.12■■□□□ 1.29
TSEN54-205ENST00000578415 RPA1P27694 616 aa23.12■■□□□ 1.29
TSEN54-205ENST00000578415 CLCNKBP51801 687 aa23.12■■□□□ 1.29
TSEN54-205ENST00000578415 TRIM29Q14134 588 aa23.12■■□□□ 1.29
TSEN54-205ENST00000578415 DCAF4L1Q3SXM0 396 aa23.12■■□□□ 1.29
TSEN54-205ENST00000578415 PABPC1LQ4VXU2 614 aaKnown RBP23.12■■□□□ 1.29
TSEN54-205ENST00000578415 DCLK2Q8N568 766 aa23.12■■□□□ 1.29
TSEN54-205ENST00000578415 ING5Q8WYH8 240 aa23.12■■□□□ 1.29
TSEN54-205ENST00000578415 RUBCNQ92622 972 aa23.12■■□□□ 1.29
TSEN54-205ENST00000578415 HINFPQ9BQA5 517 aa23.12■■□□□ 1.29
TSEN54-205ENST00000578415 KCNH3Q9ULD8 1083 aa23.12■■□□□ 1.29
TSEN54-205ENST00000578415 CDY1Q9Y6F8 540 aa23.12■■□□□ 1.29
TSEN54-205ENST00000578415 TKTP29401 623 aaKnown RBP23.11■■□□□ 1.29
TSEN54-205ENST00000578415 PFKPQ01813 784 aa23.11■■□□□ 1.29
TSEN54-205ENST00000578415 ST3GAL1Q11201 340 aa23.11■■□□□ 1.29
TSEN54-205ENST00000578415 UBXN2BQ14CS0 331 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms