RNA–Protein interactions for RNA: ENST00000577988.2

SNORD3B-1-201, Transcript of small nucleolar RNA, C/D box 3B-1, humanhuman

BASIC

Gene SNORD3B-1, Length 758 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD3B-1-201ENST00000577988 PTGESO14684 152 aa15.15■□□□□ 0.02
SNORD3B-1-201ENST00000577988 GRM6O15303 877 aa15.15■□□□□ 0.02
SNORD3B-1-201ENST00000577988 KINO60870 393 aaKnown RBP15.15■□□□□ 0.02
SNORD3B-1-201ENST00000577988 SMC2O95347 1197 aa15.15■□□□□ 0.02
SNORD3B-1-201ENST00000577988 HARSP12081 509 aaKnown RBP15.15■□□□□ 0.02
SNORD3B-1-201ENST00000577988 SLC11A1P49279 550 aa15.15■□□□□ 0.02
SNORD3B-1-201ENST00000577988 KCNA1Q09470 495 aa15.15■□□□□ 0.02
SNORD3B-1-201ENST00000577988 BMT2Q1RMZ1 405 aa15.15■□□□□ 0.02
SNORD3B-1-201ENST00000577988 CEP120Q8N960 986 aa15.15■□□□□ 0.02
SNORD3B-1-201ENST00000577988 POF1BQ8WVV4 589 aa15.15■□□□□ 0.02
SNORD3B-1-201ENST00000577988 PPP2R3CQ969Q6 453 aa15.15■□□□□ 0.02
SNORD3B-1-201ENST00000577988 DDX27Q96GQ7 796 aaKnown RBP15.15■□□□□ 0.02
SNORD3B-1-201ENST00000577988 IGSF21Q96ID5 467 aa15.15■□□□□ 0.02
SNORD3B-1-201ENST00000577988 SNX27Q96L92 541 aa15.15■□□□□ 0.02
SNORD3B-1-201ENST00000577988 UROC1Q96N76 676 aa15.15■□□□□ 0.02
SNORD3B-1-201ENST00000577988 GSDMAQ96QA5 445 aa15.15■□□□□ 0.02
SNORD3B-1-201ENST00000577988 HAPLN2Q9GZV7 340 aa15.15■□□□□ 0.02
SNORD3B-1-201ENST00000577988 ALG13Q9NP73 1137 aaKnown RBP15.15■□□□□ 0.02
SNORD3B-1-201ENST00000577988 RMND1Q9NWS8 449 aa15.15■□□□□ 0.02
SNORD3B-1-201ENST00000577988 CNTN3Q9P232 1028 aa15.15■□□□□ 0.02
SNORD3B-1-201ENST00000577988 HCSTQ9UBK5 93 aa15.15■□□□□ 0.02
SNORD3B-1-201ENST00000577988 SMIM28A0A1B0GU29 152 aa15.14■□□□□ 0.01
SNORD3B-1-201ENST00000577988 TTC26A0AVF1 554 aa15.14■□□□□ 0.01
SNORD3B-1-201ENST00000577988 NRP1O14786 923 aa15.14■□□□□ 0.01
SNORD3B-1-201ENST00000577988 XPOTO43592 962 aaKnown RBP15.14■□□□□ 0.01
SNORD3B-1-201ENST00000577988 FAM189A1O60320 539 aa15.14■□□□□ 0.01
SNORD3B-1-201ENST00000577988 SLC34A2O95436 690 aa15.14■□□□□ 0.01
SNORD3B-1-201ENST00000577988 ADSSP30520 456 aa15.14■□□□□ 0.01
SNORD3B-1-201ENST00000577988 OSTNP61366 133 aa15.14■□□□□ 0.01
SNORD3B-1-201ENST00000577988 SLC10A6Q3KNW5 377 aa15.14■□□□□ 0.01
SNORD3B-1-201ENST00000577988 HS2ST1Q7LGA3 356 aa15.14■□□□□ 0.01
SNORD3B-1-201ENST00000577988 DDX53Q86TM3 631 aaKnown RBP15.14■□□□□ 0.01
SNORD3B-1-201ENST00000577988 GOLGA5Q8TBA6 731 aa15.14■□□□□ 0.01
SNORD3B-1-201ENST00000577988 SCFD1Q8WVM8 642 aa15.14■□□□□ 0.01
SNORD3B-1-201ENST00000577988 HPS3Q969F9 1004 aa15.14■□□□□ 0.01
SNORD3B-1-201ENST00000577988 PPP1R10Q96QC0 940 aaKnown RBP15.14■□□□□ 0.01
SNORD3B-1-201ENST00000577988 FGFBP2Q9BYJ0 223 aa15.14■□□□□ 0.01
SNORD3B-1-201ENST00000577988 ASB7Q9H672 318 aa15.14■□□□□ 0.01
SNORD3B-1-201ENST00000577988 KIAA1586Q9HCI6 787 aa15.14■□□□□ 0.01
SNORD3B-1-201ENST00000577988 SLC39A2Q9NP94 309 aa15.14■□□□□ 0.01
SNORD3B-1-201ENST00000577988 NGRNQ9NPE2 291 aaKnown RBP15.14■□□□□ 0.01
SNORD3B-1-201ENST00000577988 TLR9Q9NR96 1032 aa15.14■□□□□ 0.01
SNORD3B-1-201ENST00000577988 DNAJB4Q9UDY4 337 aa15.14■□□□□ 0.01
SNORD3B-1-201ENST00000577988 CPSF3Q9UKF6 684 aaKnown RBP15.14■□□□□ 0.01
SNORD3B-1-201ENST00000577988 CHD9Q3L8U1 2897 aa15.14■□□□□ 0.01
SNORD3B-1-201ENST00000577988 COL4A4P53420 1690 aaPredicted RBP15.13■□□□□ 0.01
SNORD3B-1-201ENST00000577988 NCK2O43639 380 aa15.13■□□□□ 0.01
SNORD3B-1-201ENST00000577988 GADD45BO75293 160 aaPredicted RBP15.13■□□□□ 0.01
SNORD3B-1-201ENST00000577988 PRPF40AO75400 957 aaKnown RBP15.13■□□□□ 0.01
SNORD3B-1-201ENST00000577988 RPL9P32969 192 aaKnown RBP15.13■□□□□ 0.01
SNORD3B-1-201ENST00000577988 OR1G1P47890 313 aa15.13■□□□□ 0.01
SNORD3B-1-201ENST00000577988 PPP2R3AQ06190 1150 aa15.13■□□□□ 0.01
SNORD3B-1-201ENST00000577988 STK4Q13043 487 aa15.13■□□□□ 0.01
SNORD3B-1-201ENST00000577988 KNOP1Q1ED39 458 aaKnown RBP15.13■□□□□ 0.01
SNORD3B-1-201ENST00000577988 ARMCX5Q6P1M9 558 aa15.13■□□□□ 0.01
SNORD3B-1-201ENST00000577988 NT5DC4Q86YG4 428 aa15.13■□□□□ 0.01
SNORD3B-1-201ENST00000577988 C12orf56Q8IXR9 622 aa15.13■□□□□ 0.01
SNORD3B-1-201ENST00000577988 MAFAQ8NHW3 353 aaPredicted RBP15.13■□□□□ 0.01
SNORD3B-1-201ENST00000577988 SPATA20Q8TB22 786 aa15.13■□□□□ 0.01
SNORD3B-1-201ENST00000577988 NSUN3Q9H649 340 aaKnown RBP15.13■□□□□ 0.01
SNORD3B-1-201ENST00000577988 PLXNA4Q9HCM2 1894 aa15.13■□□□□ 0.01
SNORD3B-1-201ENST00000577988 DERAQ9Y315 318 aa15.13■□□□□ 0.01
SNORD3B-1-201ENST00000577988 CHD7Q9P2D1 2997 aa15.12■□□□□ 0.01
SNORD3B-1-201ENST00000577988 PDCD11Q14690 1871 aaKnown RBP15.12■□□□□ 0.01
SNORD3B-1-201ENST00000577988 SZT2Q5T011 3432 aa15.12■□□□□ 0.01
SNORD3B-1-201ENST00000577988 FSD2A1L4K1 749 aa15.12■□□□□ 0.01
SNORD3B-1-201ENST00000577988 NT5C1B-RDH14C9J2C7 533 aa15.12■□□□□ 0.01
SNORD3B-1-201ENST00000577988 GOLGA6L22H0YM25 854 aa15.12■□□□□ 0.01
SNORD3B-1-201ENST00000577988 EXTL3O43909 919 aa15.12■□□□□ 0.01
SNORD3B-1-201ENST00000577988 IL18RAPO95256 599 aa15.12■□□□□ 0.01
SNORD3B-1-201ENST00000577988 PRR29P0C7W0 189 aa15.12■□□□□ 0.01
SNORD3B-1-201ENST00000577988 CXCL8P10145 99 aa15.12■□□□□ 0.01
SNORD3B-1-201ENST00000577988 CYP3A5P20815 502 aa15.12■□□□□ 0.01
SNORD3B-1-201ENST00000577988 HOXD13P35453 343 aa15.12■□□□□ 0.01
SNORD3B-1-201ENST00000577988 ELAVL2Q12926 359 aaKnown RBP15.12■□□□□ 0.01
SNORD3B-1-201ENST00000577988 CAMK1Q14012 370 aa15.12■□□□□ 0.01
SNORD3B-1-201ENST00000577988 NAB2Q15742 525 aa15.12■□□□□ 0.01
SNORD3B-1-201ENST00000577988 DCLRE1AQ6PJP8 1040 aa15.12■□□□□ 0.01
SNORD3B-1-201ENST00000577988 GPR65Q8IYL9 337 aa15.12■□□□□ 0.01
SNORD3B-1-201ENST00000577988 KIAA0895Q8NCT3 520 aa15.12■□□□□ 0.01
SNORD3B-1-201ENST00000577988 GLIS3Q8NEA6 775 aa15.12■□□□□ 0.01
SNORD3B-1-201ENST00000577988 TMEM174Q8WUU8 243 aa15.12■□□□□ 0.01
SNORD3B-1-201ENST00000577988 UBQLN1Q9UMX0 589 aaKnown RBP15.12■□□□□ 0.01
SNORD3B-1-201ENST00000577988 SSX2IPQ9Y2D8 614 aa15.12■□□□□ 0.01
SNORD3B-1-201ENST00000577988 TMEM189-UBE2V1I3L0A0 370 aa15.11■□□□□ 0.01
SNORD3B-1-201ENST00000577988 PDXKO00764 312 aa15.11■□□□□ 0.01
SNORD3B-1-201ENST00000577988 FSCN2O14926 492 aa15.11■□□□□ 0.01
SNORD3B-1-201ENST00000577988 B4GALT3O60512 393 aa15.11■□□□□ 0.01
SNORD3B-1-201ENST00000577988 PAX3P23760 479 aa15.11■□□□□ 0.01
SNORD3B-1-201ENST00000577988 DNAJB1P25685 340 aa15.11■□□□□ 0.01
SNORD3B-1-201ENST00000577988 PBX3P40426 434 aa15.11■□□□□ 0.01
SNORD3B-1-201ENST00000577988 TNFSF9P41273 254 aa15.11■□□□□ 0.01
SNORD3B-1-201ENST00000577988 ACOT2P49753 483 aa15.11■□□□□ 0.01
SNORD3B-1-201ENST00000577988 PNOCQ13519 176 aa15.11■□□□□ 0.01
SNORD3B-1-201ENST00000577988 MYBPC2Q14324 1141 aa15.11■□□□□ 0.01
SNORD3B-1-201ENST00000577988 SURF1Q15526 300 aa15.11■□□□□ 0.01
SNORD3B-1-201ENST00000577988 ZBTB6Q15916 424 aa15.11■□□□□ 0.01
SNORD3B-1-201ENST00000577988 ENOX2Q16206 610 aaKnown RBP15.11■□□□□ 0.01
SNORD3B-1-201ENST00000577988 SEZ6Q53EL9 994 aa15.11■□□□□ 0.01
SNORD3B-1-201ENST00000577988 GPD1LQ8N335 351 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms