RNA–Protein interactions for RNA: ENST00000577541.1

TOP2A-202, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 2

Gene TOP2A, Length 420 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-202ENST00000577541 UBE2R2Q712K3 238 aaPredicted RBP3.7□□□□□ -1.82
TOP2A-202ENST00000577541 KIAA0907Q7Z7F0 614 aaPredicted RBP3.7□□□□□ -1.82
TOP2A-202ENST00000577541 ZZZ3Q8IYH5 903 aa3.7□□□□□ -1.82
TOP2A-202ENST00000577541 KIAA1958Q8N8K9 716 aa3.7□□□□□ -1.82
TOP2A-202ENST00000577541 APPBP2Q92624 585 aa3.7□□□□□ -1.82
TOP2A-202ENST00000577541 FUBP1Q96AE4 644 aaKnown RBP3.7□□□□□ -1.82
TOP2A-202ENST00000577541 AIFM2Q9BRQ8 373 aa3.7□□□□□ -1.82
TOP2A-202ENST00000577541 MTFR1LQ9H019 292 aa3.7□□□□□ -1.82
TOP2A-202ENST00000577541 CPNE5Q9HCH3 593 aa3.7□□□□□ -1.82
TOP2A-202ENST00000577541 PLAAQ9Y263 795 aa3.7□□□□□ -1.82
TOP2A-202ENST00000577541 UBA6A0AVT1 1052 aaPredicted RBP3.69□□□□□ -1.82
TOP2A-202ENST00000577541 JMJD7P0C870 316 aa3.69□□□□□ -1.82
TOP2A-202ENST00000577541 LRRC32Q14392 662 aa3.69□□□□□ -1.82
TOP2A-202ENST00000577541 MYBPC3Q14896 1274 aa3.69□□□□□ -1.82
TOP2A-202ENST00000577541 LLGL1Q15334 1064 aa3.69□□□□□ -1.82
TOP2A-202ENST00000577541 PRAMEF9Q5VWM5 478 aa3.69□□□□□ -1.82
TOP2A-202ENST00000577541 ESRP1Q6NXG1 681 aaKnown RBP3.69□□□□□ -1.82
TOP2A-202ENST00000577541 EFHBQ8N7U6 833 aa3.69□□□□□ -1.82
TOP2A-202ENST00000577541 PPP1R14CQ8TAE6 165 aa3.69□□□□□ -1.82
TOP2A-202ENST00000577541 FEZ1Q99689 392 aa3.69□□□□□ -1.82
TOP2A-202ENST00000577541 NOX1Q9Y5S8 564 aa3.69□□□□□ -1.82
TOP2A-202ENST00000577541 IGKV2D-30A0A075B6S6 120 aa3.68□□□□□ -1.82
TOP2A-202ENST00000577541 A0A0A6YYJ9 748 aa3.68□□□□□ -1.82
TOP2A-202ENST00000577541 MAFGO15525 162 aa3.68□□□□□ -1.82
TOP2A-202ENST00000577541 PTX3P26022 381 aaPredicted RBP3.68□□□□□ -1.82
TOP2A-202ENST00000577541 RANGAP1P46060 587 aaPredicted RBP3.68□□□□□ -1.82
TOP2A-202ENST00000577541 ZNF174Q15697 407 aa3.68□□□□□ -1.82
TOP2A-202ENST00000577541 TKFCQ3LXA3 575 aa3.68□□□□□ -1.82
TOP2A-202ENST00000577541 CFAP100Q494V2 611 aa3.68□□□□□ -1.82
TOP2A-202ENST00000577541 LRRTM3Q86VH5 581 aa3.68□□□□□ -1.82
TOP2A-202ENST00000577541 JAZF1Q86VZ6 243 aa3.68□□□□□ -1.82
TOP2A-202ENST00000577541 PHYKPLQ8IUZ5 450 aa3.68□□□□□ -1.82
TOP2A-202ENST00000577541 PPM1KQ8N3J5 372 aa3.68□□□□□ -1.82
TOP2A-202ENST00000577541 TMEM132CQ8N3T6 1108 aa3.68□□□□□ -1.82
TOP2A-202ENST00000577541 TUBGCP5Q96RT8 1024 aa3.68□□□□□ -1.82
TOP2A-202ENST00000577541 ELF4Q99607 663 aaPredicted RBP3.68□□□□□ -1.82
TOP2A-202ENST00000577541 PCIF1Q9H4Z3 704 aa3.68□□□□□ -1.82
TOP2A-202ENST00000577541 ZMAT4Q9H898 229 aa3.68□□□□□ -1.82
TOP2A-202ENST00000577541 ANLNQ9NQW6 1124 aa3.68□□□□□ -1.82
TOP2A-202ENST00000577541 ATP11BQ9Y2G3 1177 aa3.68□□□□□ -1.82
TOP2A-202ENST00000577541 ZKSCAN5Q9Y2L8 839 aa3.68□□□□□ -1.82
TOP2A-202ENST00000577541 CD2APQ9Y5K6 639 aa3.68□□□□□ -1.82
TOP2A-202ENST00000577541 ENTPD2Q9Y5L3 495 aa3.68□□□□□ -1.82
TOP2A-202ENST00000577541 ATP2A2P16615 1042 aaKnown RBP3.67□□□□□ -1.82
TOP2A-202ENST00000577541 PHC1P78364 1004 aa3.67□□□□□ -1.82
TOP2A-202ENST00000577541 DUSP2Q05923 314 aa3.67□□□□□ -1.82
TOP2A-202ENST00000577541 DALRD3Q5D0E6 543 aaKnown RBP3.67□□□□□ -1.82
TOP2A-202ENST00000577541 MORN5Q5VZ52 161 aa3.67□□□□□ -1.82
TOP2A-202ENST00000577541 FCRLBQ6BAA4 426 aa3.67□□□□□ -1.82
TOP2A-202ENST00000577541 KIAA1161Q6NSJ0 714 aa3.67□□□□□ -1.82
TOP2A-202ENST00000577541 MAPKAPK5Q8IW41 473 aa3.67□□□□□ -1.82
TOP2A-202ENST00000577541 NIM1KQ8IY84 436 aa3.67□□□□□ -1.82
TOP2A-202ENST00000577541 UNC5BQ8IZJ1 945 aa3.67□□□□□ -1.82
TOP2A-202ENST00000577541 SEMA6DQ8NFY4 1073 aa3.67□□□□□ -1.82
TOP2A-202ENST00000577541 DENND1AQ8TEH3 1009 aa3.67□□□□□ -1.82
TOP2A-202ENST00000577541 NRIP3Q9NQ35 241 aa3.67□□□□□ -1.82
TOP2A-202ENST00000577541 FANCLQ9NW38 375 aa3.67□□□□□ -1.82
TOP2A-202ENST00000577541 OXSMQ9NWU1 459 aa3.67□□□□□ -1.82
TOP2A-202ENST00000577541 DMTF1Q9Y222 760 aa3.67□□□□□ -1.82
TOP2A-202ENST00000577541 AOX1Q06278 1338 aa3.67□□□□□ -1.82
TOP2A-202ENST00000577541 TBKBP1A7MCY6 615 aa3.66□□□□□ -1.82
TOP2A-202ENST00000577541 CDC45O75419 566 aa3.66□□□□□ -1.82
TOP2A-202ENST00000577541 HYAL1Q12794 435 aa3.66□□□□□ -1.82
TOP2A-202ENST00000577541 SLC10A2Q12908 348 aaPredicted RBP3.66□□□□□ -1.82
TOP2A-202ENST00000577541 GRM1Q13255 1194 aa3.66□□□□□ -1.82
TOP2A-202ENST00000577541 ZNF260Q3ZCT1 412 aa3.66□□□□□ -1.82
TOP2A-202ENST00000577541 B3GNTL1Q67FW5 361 aaPredicted RBP3.66□□□□□ -1.82
TOP2A-202ENST00000577541 KIAA1841Q6NSI8 718 aa3.66□□□□□ -1.82
TOP2A-202ENST00000577541 UNQ6494/PRO21346Q6UXR6 183 aa3.66□□□□□ -1.82
TOP2A-202ENST00000577541 NOP9Q86U38 636 aaKnown RBP3.66□□□□□ -1.82
TOP2A-202ENST00000577541 RNF169Q8NCN4 708 aa3.66□□□□□ -1.82
TOP2A-202ENST00000577541 SMC1BQ8NDV3 1235 aa3.66□□□□□ -1.82
TOP2A-202ENST00000577541 MFSD3Q96ES6 412 aa3.66□□□□□ -1.82
TOP2A-202ENST00000577541 TBX22Q9Y458 520 aa3.66□□□□□ -1.82
TOP2A-202ENST00000577541 GSG1L2A8MUP6 293 aa3.65□□□□□ -1.83
TOP2A-202ENST00000577541 B5MCH6 92 aa3.65□□□□□ -1.83
TOP2A-202ENST00000577541 PPEF2O14830 753 aa3.65□□□□□ -1.83
TOP2A-202ENST00000577541 TGM5O43548 720 aa3.65□□□□□ -1.83
TOP2A-202ENST00000577541 OPHN1O60890 802 aa3.65□□□□□ -1.83
TOP2A-202ENST00000577541 KRT37O76014 449 aa3.65□□□□□ -1.83
TOP2A-202ENST00000577541 CLEC2LP0C7M8 214 aa3.65□□□□□ -1.83
TOP2A-202ENST00000577541 SLC9A1P19634 815 aa3.65□□□□□ -1.83
TOP2A-202ENST00000577541 CD40P25942 277 aa3.65□□□□□ -1.83
TOP2A-202ENST00000577541 CD69Q07108 199 aa3.65□□□□□ -1.83
TOP2A-202ENST00000577541 CCDC178Q5BJE1 867 aa3.65□□□□□ -1.83
TOP2A-202ENST00000577541 AGAP9Q5VTM2 703 aa3.65□□□□□ -1.83
TOP2A-202ENST00000577541 NPM2Q86SE8 214 aaKnown RBP3.65□□□□□ -1.83
TOP2A-202ENST00000577541 AHI1Q8N157 1196 aa3.65□□□□□ -1.83
TOP2A-202ENST00000577541 MSL3Q8N5Y2 521 aaKnown RBP3.65□□□□□ -1.83
TOP2A-202ENST00000577541 TFAP2CQ92754 450 aa3.65□□□□□ -1.83
TOP2A-202ENST00000577541 TARS2Q9BW92 718 aaKnown RBP3.65□□□□□ -1.83
TOP2A-202ENST00000577541 WNT8AQ9H1J5 351 aa3.65□□□□□ -1.83
TOP2A-202ENST00000577541 EBF3Q9H4W6 596 aa3.65□□□□□ -1.83
TOP2A-202ENST00000577541 TMEM74BQ9NUR3 256 aa3.65□□□□□ -1.83
TOP2A-202ENST00000577541 MRPL42Q9Y6G3 142 aaKnown RBP3.65□□□□□ -1.83
TOP2A-202ENST00000577541 ZMYM3Q14202 1370 aa3.64□□□□□ -1.83
TOP2A-202ENST00000577541 A0A087X0B3 334 aa3.64□□□□□ -1.83
TOP2A-202ENST00000577541 ZNF891A8MT65 544 aaPredicted RBP3.64□□□□□ -1.83
TOP2A-202ENST00000577541 GAS7O60861 476 aa3.64□□□□□ -1.83
TOP2A-202ENST00000577541 SEC24DO94855 1032 aaPredicted RBP3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms