RNA–Protein interactions for RNA: ENST00000577241.1

MSI2-205, Transcript of musashi RNA binding protein 2, humanhuman

TSL 3

Gene MSI2, Length 710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-205ENST00000577241 ELAVL2Q12926 359 aaKnown RBP17.18■□□□□ 0.34
MSI2-205ENST00000577241 CNNM4Q6P4Q7 775 aa17.18■□□□□ 0.34
MSI2-205ENST00000577241 ALKAL1Q6UXT8 129 aa17.18■□□□□ 0.34
MSI2-205ENST00000577241 TMEM184AQ6ZMB5 413 aa17.18■□□□□ 0.34
MSI2-205ENST00000577241 CEP120Q8N960 986 aa17.18■□□□□ 0.34
MSI2-205ENST00000577241 PPP1R10Q96QC0 940 aaKnown RBP17.18■□□□□ 0.34
MSI2-205ENST00000577241 TSPAN18Q96SJ8 248 aa17.18■□□□□ 0.34
MSI2-205ENST00000577241 HERC2P3Q9BVR0 1158 aa17.18■□□□□ 0.34
MSI2-205ENST00000577241 EMILIN2Q9BXX0 1053 aa17.18■□□□□ 0.34
MSI2-205ENST00000577241 MARCH5Q9NX47 278 aa17.18■□□□□ 0.34
MSI2-205ENST00000577241 KCNH3Q9ULD8 1083 aa17.18■□□□□ 0.34
MSI2-205ENST00000577241 PCDHGC5Q9Y5F6 944 aa17.18■□□□□ 0.34
MSI2-205ENST00000577241 PLXNA4Q9HCM2 1894 aa17.18■□□□□ 0.34
MSI2-205ENST00000577241 SMIM28A0A1B0GU29 152 aa17.17■□□□□ 0.34
MSI2-205ENST00000577241 H3BQ06 376 aaPredicted RBP17.17■□□□□ 0.34
MSI2-205ENST00000577241 DLL1O00548 723 aa17.17■□□□□ 0.34
MSI2-205ENST00000577241 PER2O15055 1255 aa17.17■□□□□ 0.34
MSI2-205ENST00000577241 OGTO15294 1046 aa17.17■□□□□ 0.34
MSI2-205ENST00000577241 HARSP12081 509 aaKnown RBP17.17■□□□□ 0.34
MSI2-205ENST00000577241 KCNE1P15382 129 aa17.17■□□□□ 0.34
MSI2-205ENST00000577241 CMA1P23946 247 aa17.17■□□□□ 0.34
MSI2-205ENST00000577241 GTF2F1P35269 517 aaKnown RBP eCLIP17.17■□□□□ 0.34
MSI2-205ENST00000577241 POSTNQ15063 836 aa17.17■□□□□ 0.34
MSI2-205ENST00000577241 NAB2Q15742 525 aa17.17■□□□□ 0.34
MSI2-205ENST00000577241 PTCRAQ6ISU1 281 aaPredicted RBP17.17■□□□□ 0.34
MSI2-205ENST00000577241 KIAA1841Q6NSI8 718 aa17.17■□□□□ 0.34
MSI2-205ENST00000577241 CEP57L1Q8IYX8 460 aa17.17■□□□□ 0.34
MSI2-205ENST00000577241 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.17■□□□□ 0.34
MSI2-205ENST00000577241 CASP10Q92851 521 aa17.17■□□□□ 0.34
MSI2-205ENST00000577241 DDX27Q96GQ7 796 aaKnown RBP17.17■□□□□ 0.34
MSI2-205ENST00000577241 SNX27Q96L92 541 aa17.17■□□□□ 0.34
MSI2-205ENST00000577241 ACCSQ96QU6 501 aa17.17■□□□□ 0.34
MSI2-205ENST00000577241 COL25A1Q9BXS0 654 aaPredicted RBP17.17■□□□□ 0.34
MSI2-205ENST00000577241 TRIM9Q9C026 710 aa17.17■□□□□ 0.34
MSI2-205ENST00000577241 CNTN3Q9P232 1028 aa17.17■□□□□ 0.34
MSI2-205ENST00000577241 USP25Q9UHP3 1055 aa17.17■□□□□ 0.34
MSI2-205ENST00000577241 CD207Q9UJ71 328 aa17.17■□□□□ 0.34
MSI2-205ENST00000577241 MYO7AQ13402 2215 aa17.17■□□□□ 0.34
MSI2-205ENST00000577241 SF3B1O75533 1304 aaKnown RBP eCLIP17.17■□□□□ 0.34
MSI2-205ENST00000577241 UNC80Q8N2C7 3258 aa17.16■□□□□ 0.34
MSI2-205ENST00000577241 A0A0B4J269 797 aa17.16■□□□□ 0.34
MSI2-205ENST00000577241 GRXCR2A6NFK2 248 aa17.16■□□□□ 0.34
MSI2-205ENST00000577241 CASTOR2A6NHX0 329 aa17.16■□□□□ 0.34
MSI2-205ENST00000577241 TMEM189-UBE2V1I3L0A0 370 aa17.16■□□□□ 0.34
MSI2-205ENST00000577241 LINC01565O15544 149 aa17.16■□□□□ 0.34
MSI2-205ENST00000577241 PPP1R37O75864 691 aa17.16■□□□□ 0.34
MSI2-205ENST00000577241 GCNT3O95395 438 aa17.16■□□□□ 0.34
MSI2-205ENST00000577241 EFEMP2O95967 443 aa17.16■□□□□ 0.34
MSI2-205ENST00000577241 HOXB8P17481 243 aaPredicted RBP17.16■□□□□ 0.34
MSI2-205ENST00000577241 GLUD2P49448 558 aa17.16■□□□□ 0.34
MSI2-205ENST00000577241 POU5F1Q01860 360 aaKnown RBP17.16■□□□□ 0.34
MSI2-205ENST00000577241 CREMQ03060 361 aa17.16■□□□□ 0.34
MSI2-205ENST00000577241 COASYQ13057 564 aa17.16■□□□□ 0.34
MSI2-205ENST00000577241 PTPN14Q15678 1187 aa17.16■□□□□ 0.34
MSI2-205ENST00000577241 USP41Q3LFD5 358 aa17.16■□□□□ 0.34
MSI2-205ENST00000577241 ZC2HC1CQ53FD0 456 aaPredicted RBP17.16■□□□□ 0.34
MSI2-205ENST00000577241 L1TD1Q5T7N2 865 aaKnown RBP17.16■□□□□ 0.34
MSI2-205ENST00000577241 FUT10Q6P4F1 479 aa17.16■□□□□ 0.34
MSI2-205ENST00000577241 DCLRE1AQ6PJP8 1040 aa17.16■□□□□ 0.34
MSI2-205ENST00000577241 RNF168Q8IYW5 571 aaPredicted RBP17.16■□□□□ 0.34
MSI2-205ENST00000577241 ADAMTS19Q8TE59 1207 aa17.16■□□□□ 0.34
MSI2-205ENST00000577241 C7orf25Q9BPX7 421 aa17.16■□□□□ 0.34
MSI2-205ENST00000577241 MSTO1Q9BUK6 570 aa17.16■□□□□ 0.34
MSI2-205ENST00000577241 STRA6Q9BX79 667 aa17.16■□□□□ 0.34
MSI2-205ENST00000577241 VN1R3Q9BXE9 311 aa17.16■□□□□ 0.34
MSI2-205ENST00000577241 TMEM206Q9H813 350 aa17.16■□□□□ 0.34
MSI2-205ENST00000577241 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.16■□□□□ 0.34
MSI2-205ENST00000577241 CHST7Q9NS84 486 aa17.16■□□□□ 0.34
MSI2-205ENST00000577241 MYH11P35749 1972 aa17.16■□□□□ 0.34
MSI2-205ENST00000577241 XPOTO43592 962 aaKnown RBP17.15■□□□□ 0.34
MSI2-205ENST00000577241 TRAPPC3O43617 180 aa17.15■□□□□ 0.34
MSI2-205ENST00000577241 TBX10O75333 385 aa17.15■□□□□ 0.34
MSI2-205ENST00000577241 RPL9P32969 192 aaKnown RBP17.15■□□□□ 0.34
MSI2-205ENST00000577241 ASIC1P78348 528 aa17.15■□□□□ 0.34
MSI2-205ENST00000577241 DSG1Q02413 1049 aa17.15■□□□□ 0.34
MSI2-205ENST00000577241 SMAD4Q13485 552 aaKnown RBP17.15■□□□□ 0.34
MSI2-205ENST00000577241 KCNC3Q14003 757 aa17.15■□□□□ 0.34
MSI2-205ENST00000577241 SLC10A6Q3KNW5 377 aa17.15■□□□□ 0.34
MSI2-205ENST00000577241 GLRA4Q5JXX5 417 aa17.15■□□□□ 0.34
MSI2-205ENST00000577241 PDXDC1Q6P996 788 aa17.15■□□□□ 0.34
MSI2-205ENST00000577241 ELMSAN1Q6PJG2 1045 aa17.15■□□□□ 0.34
MSI2-205ENST00000577241 CD302Q8IX05 232 aa17.15■□□□□ 0.34
MSI2-205ENST00000577241 MSLNLQ96KJ4 702 aa17.15■□□□□ 0.34
MSI2-205ENST00000577241 UHRF1Q96T88 793 aaPredicted RBP17.15■□□□□ 0.34
MSI2-205ENST00000577241 RPF1Q9H9Y2 349 aaKnown RBP17.15■□□□□ 0.34
MSI2-205ENST00000577241 DPP7Q9UHL4 492 aa17.15■□□□□ 0.34
MSI2-205ENST00000577241 STYXL1Q9Y6J8 313 aa17.15■□□□□ 0.34
MSI2-205ENST00000577241 PVALEFA0A1B0GWK0 134 aa17.14■□□□□ 0.33
MSI2-205ENST00000577241 LILRB3O75022 631 aa17.14■□□□□ 0.33
MSI2-205ENST00000577241 CLASP2O75122 1294 aaKnown RBP17.14■□□□□ 0.33
MSI2-205ENST00000577241 B3GAT3O94766 335 aa17.14■□□□□ 0.33
MSI2-205ENST00000577241 GLP2RO95838 553 aa17.14■□□□□ 0.33
MSI2-205ENST00000577241 C1RP00736 705 aa17.14■□□□□ 0.33
MSI2-205ENST00000577241 MYL1P05976 194 aa17.14■□□□□ 0.33
MSI2-205ENST00000577241 SLFN14P0C7P3 912 aa17.14■□□□□ 0.33
MSI2-205ENST00000577241 PPP2R3AQ06190 1150 aa17.14■□□□□ 0.33
MSI2-205ENST00000577241 DLX2Q07687 328 aaPredicted RBP17.14■□□□□ 0.33
MSI2-205ENST00000577241 TPRNQ4KMQ1 711 aa17.14■□□□□ 0.33
MSI2-205ENST00000577241 STAMQ92783 540 aa17.14■□□□□ 0.33
MSI2-205ENST00000577241 TBC1D7Q9P0N9 293 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms