RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 ZNF302Q9NR11 478 aa7.05□□□□□ -1.28
NUP88-212ENST00000576708 PPP4R2Q9NY27 417 aa7.05□□□□□ -1.28
NUP88-212ENST00000576708 PCDHGC5Q9Y5F6 944 aa7.05□□□□□ -1.28
NUP88-212ENST00000576708 IGSF9BQ9UPX0 1349 aa7.04□□□□□ -1.28
NUP88-212ENST00000576708 ATG2AQ2TAZ0 1938 aa7.04□□□□□ -1.28
NUP88-212ENST00000576708 PI4K2BG5E9Z4 385 aa7.04□□□□□ -1.28
NUP88-212ENST00000576708 hCG_1984214I3L0E3 225 aa7.04□□□□□ -1.28
NUP88-212ENST00000576708 M0QZ92 97 aa7.04□□□□□ -1.28
NUP88-212ENST00000576708 IPO5O00410 1097 aaKnown RBP7.04□□□□□ -1.28
NUP88-212ENST00000576708 PIK3R2O00459 728 aa7.04□□□□□ -1.28
NUP88-212ENST00000576708 PRPF3O43395 683 aaKnown RBP7.04□□□□□ -1.28
NUP88-212ENST00000576708 HBP1O60381 514 aa7.04□□□□□ -1.28
NUP88-212ENST00000576708 DEAF1O75398 565 aaPredicted RBP7.04□□□□□ -1.28
NUP88-212ENST00000576708 VTNP04004 478 aa7.04□□□□□ -1.28
NUP88-212ENST00000576708 ITGB1P05556 798 aa7.04□□□□□ -1.28
NUP88-212ENST00000576708 RB1P06400 928 aa7.04□□□□□ -1.28
NUP88-212ENST00000576708 CYP3A4P08684 503 aa7.04□□□□□ -1.28
NUP88-212ENST00000576708 USP17L7P0C7H9 530 aa7.04□□□□□ -1.28
NUP88-212ENST00000576708 RPS6KB1P23443 525 aa7.04□□□□□ -1.28
NUP88-212ENST00000576708 SETDB1Q15047 1291 aa7.04□□□□□ -1.28
NUP88-212ENST00000576708 NTRK3Q16288 839 aa7.04□□□□□ -1.28
NUP88-212ENST00000576708 KIZQ2M2Z5 673 aa7.04□□□□□ -1.28
NUP88-212ENST00000576708 PRR16Q569H4 304 aa7.04□□□□□ -1.28
NUP88-212ENST00000576708 TMEM31Q5JXX7 168 aa7.04□□□□□ -1.28
NUP88-212ENST00000576708 FAM102BQ5T8I3 360 aa7.04□□□□□ -1.28
NUP88-212ENST00000576708 FAM160B1Q5W0V3 765 aa7.04□□□□□ -1.28
NUP88-212ENST00000576708 BLOC1S2Q6QNY1 142 aa7.04□□□□□ -1.28
NUP88-212ENST00000576708 NIPA1Q7RTP0 329 aa7.04□□□□□ -1.28
NUP88-212ENST00000576708 ADGRD2Q7Z7M1 963 aa7.04□□□□□ -1.28
NUP88-212ENST00000576708 CKAP2LQ8IYA6 745 aa7.04□□□□□ -1.28
NUP88-212ENST00000576708 ZNF713Q8N859 430 aaPredicted RBP7.04□□□□□ -1.28
NUP88-212ENST00000576708 KLHL23Q8NBE8 558 aa7.04□□□□□ -1.28
NUP88-212ENST00000576708 SPPL3Q8TCT6 385 aa7.04□□□□□ -1.28
NUP88-212ENST00000576708 LENG9Q96B70 501 aa7.04□□□□□ -1.28
NUP88-212ENST00000576708 ZNF577Q9BSK1 485 aa7.04□□□□□ -1.28
NUP88-212ENST00000576708 C11orf84Q9BUA3 381 aaPredicted RBP7.04□□□□□ -1.28
NUP88-212ENST00000576708 SLC26A6Q9BXS9 759 aa7.04□□□□□ -1.28
NUP88-212ENST00000576708 ZMYND12Q9H0C1 365 aa7.04□□□□□ -1.28
NUP88-212ENST00000576708 C6orf50Q9HD87 102 aa7.04□□□□□ -1.28
NUP88-212ENST00000576708 VPS54Q9P1Q0 977 aa7.04□□□□□ -1.28
NUP88-212ENST00000576708 GABBR1Q9UBS5 961 aa7.04□□□□□ -1.28
NUP88-212ENST00000576708 ST3GAL5Q9UNP4 418 aa7.04□□□□□ -1.28
NUP88-212ENST00000576708 PLAGL2Q9UPG8 496 aa7.04□□□□□ -1.28
NUP88-212ENST00000576708 AK5Q9Y6K8 562 aa7.04□□□□□ -1.28
NUP88-212ENST00000576708 KAT6AQ92794 2004 aa7.04□□□□□ -1.28
NUP88-212ENST00000576708 KDM3AQ9Y4C1 1321 aa7.03□□□□□ -1.28
NUP88-212ENST00000576708 BDP1A6H8Y1 2624 aa7.03□□□□□ -1.28
NUP88-212ENST00000576708 RALGAPA2Q2PPJ7 1873 aa7.03□□□□□ -1.28
NUP88-212ENST00000576708 ESYT2A0FGR8 921 aa7.03□□□□□ -1.28
NUP88-212ENST00000576708 H3BRJ5 948 aa7.03□□□□□ -1.28
NUP88-212ENST00000576708 FSCN2O14926 492 aa7.03□□□□□ -1.28
NUP88-212ENST00000576708 ZNF862O60290 1169 aa7.03□□□□□ -1.28
NUP88-212ENST00000576708 TBX10O75333 385 aa7.03□□□□□ -1.28
NUP88-212ENST00000576708 RPS6KA5O75582 802 aa7.03□□□□□ -1.28
NUP88-212ENST00000576708 C22orf31O95567 290 aa7.03□□□□□ -1.28
NUP88-212ENST00000576708 MMP1P03956 469 aa7.03□□□□□ -1.28
NUP88-212ENST00000576708 FGFR1P11362 822 aa7.03□□□□□ -1.28
NUP88-212ENST00000576708 ESRRAP11474 423 aaPredicted RBP7.03□□□□□ -1.28
NUP88-212ENST00000576708 EIF4BP23588 611 aaKnown RBP7.03□□□□□ -1.28
NUP88-212ENST00000576708 ITPKAP23677 461 aa7.03□□□□□ -1.28
NUP88-212ENST00000576708 PDIA3P30101 505 aaKnown RBP7.03□□□□□ -1.28
NUP88-212ENST00000576708 CLCN3P51790 818 aa7.03□□□□□ -1.28
NUP88-212ENST00000576708 RAC1P63000 192 aa7.03□□□□□ -1.28
NUP88-212ENST00000576708 RBM10P98175 930 aaKnown RBP7.03□□□□□ -1.28
NUP88-212ENST00000576708 PCDH1Q08174 1060 aa7.03□□□□□ -1.28
NUP88-212ENST00000576708 UGCGQ16739 394 aa7.03□□□□□ -1.28
NUP88-212ENST00000576708 ZNF423Q2M1K9 1284 aa7.03□□□□□ -1.28
NUP88-212ENST00000576708 ZNF484Q5JVG2 852 aa7.03□□□□□ -1.28
NUP88-212ENST00000576708 MIS18BP1Q6P0N0 1132 aa7.03□□□□□ -1.28
NUP88-212ENST00000576708 RBM23Q86U06 439 aaKnown RBP7.03□□□□□ -1.28
NUP88-212ENST00000576708 FAM228AQ86W67 206 aa7.03□□□□□ -1.28
NUP88-212ENST00000576708 CMTR2Q8IYT2 770 aaKnown RBP7.03□□□□□ -1.28
NUP88-212ENST00000576708 REXO1Q8N1G1 1221 aaKnown RBP7.03□□□□□ -1.28
NUP88-212ENST00000576708 CACTIN-AS1Q8N1I8 211 aa7.03□□□□□ -1.28
NUP88-212ENST00000576708 NME8Q8N427 588 aa7.03□□□□□ -1.28
NUP88-212ENST00000576708 LRRC71Q8N4P6 559 aa7.03□□□□□ -1.28
NUP88-212ENST00000576708 METTL13Q8N6R0 699 aa7.03□□□□□ -1.28
NUP88-212ENST00000576708 GALNT11Q8NCW6 608 aa7.03□□□□□ -1.28
NUP88-212ENST00000576708 POF1BQ8WVV4 589 aa7.03□□□□□ -1.28
NUP88-212ENST00000576708 TNPO1Q92973 898 aaKnown RBP7.03□□□□□ -1.28
NUP88-212ENST00000576708 ADAM2Q99965 735 aa7.03□□□□□ -1.28
NUP88-212ENST00000576708 FTHL17Q9BXU8 183 aa7.03□□□□□ -1.28
NUP88-212ENST00000576708 LMAN2LQ9H0V9 348 aa7.03□□□□□ -1.28
NUP88-212ENST00000576708 GLT8D2Q9H1C3 349 aa7.03□□□□□ -1.28
NUP88-212ENST00000576708 CLEC4MQ9H2X3 399 aaPredicted RBP7.03□□□□□ -1.28
NUP88-212ENST00000576708 SQORQ9Y6N5 450 aa7.03□□□□□ -1.28
NUP88-212ENST00000576708 KIAA1671Q9BY89 1806 aa7.03□□□□□ -1.28
NUP88-212ENST00000576708 LOXHD1Q8IVV2 1947 aa7.03□□□□□ -1.28
NUP88-212ENST00000576708 TTC3P53804 2025 aa7.02□□□□□ -1.29
NUP88-212ENST00000576708 CCDC196A0A1B0GTZ2 297 aa7.02□□□□□ -1.29
NUP88-212ENST00000576708 DENND3A2RUS2 1198 aa7.02□□□□□ -1.29
NUP88-212ENST00000576708 TMEM150BA6NC51 233 aa7.02□□□□□ -1.29
NUP88-212ENST00000576708 TBKBP1A7MCY6 615 aa7.02□□□□□ -1.29
NUP88-212ENST00000576708 C9IYK1 514 aa7.02□□□□□ -1.29
NUP88-212ENST00000576708 GIPC1O14908 333 aa7.02□□□□□ -1.29
NUP88-212ENST00000576708 PER2O15055 1255 aa7.02□□□□□ -1.29
NUP88-212ENST00000576708 MSH4O15457 936 aa7.02□□□□□ -1.29
NUP88-212ENST00000576708 MBTPS2O43462 519 aa7.02□□□□□ -1.29
NUP88-212ENST00000576708 CHMP2AO43633 222 aa7.02□□□□□ -1.29
NUP88-212ENST00000576708 GPR32O75388 356 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms