RNA–Protein interactions for RNA: ENST00000575547.1

POLR2A-204, Transcript of RNA polymerase II subunit A, humanhuman

TSL 3

Gene POLR2A, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-204ENST00000575547 B3GAT3O94766 335 aa7.22□□□□□ -1.25
POLR2A-204ENST00000575547 KIF4AO95239 1232 aa7.22□□□□□ -1.25
POLR2A-204ENST00000575547 LAMP2P13473 410 aa7.22□□□□□ -1.25
POLR2A-204ENST00000575547 NPR3P17342 541 aa7.22□□□□□ -1.25
POLR2A-204ENST00000575547 AOC1P19801 751 aa7.22□□□□□ -1.25
POLR2A-204ENST00000575547 ELF1P32519 619 aa7.22□□□□□ -1.25
POLR2A-204ENST00000575547 OR1D2P34982 312 aa7.22□□□□□ -1.25
POLR2A-204ENST00000575547 YARSP54577 528 aaKnown RBP7.22□□□□□ -1.25
POLR2A-204ENST00000575547 PEX3P56589 373 aa7.22□□□□□ -1.25
POLR2A-204ENST00000575547 PTGDRQ13258 359 aa7.22□□□□□ -1.25
POLR2A-204ENST00000575547 RTP2Q5QGT7 225 aa7.22□□□□□ -1.25
POLR2A-204ENST00000575547 NT5DC1Q5TFE4 455 aa7.22□□□□□ -1.25
POLR2A-204ENST00000575547 EEF1DP3Q658K8 133 aa7.22□□□□□ -1.25
POLR2A-204ENST00000575547 MCTP1Q6DN14 999 aa7.22□□□□□ -1.25
POLR2A-204ENST00000575547 DTHD1Q6ZMT9 781 aa7.22□□□□□ -1.25
POLR2A-204ENST00000575547 GRASPQ7Z6J2 395 aaPredicted RBP7.22□□□□□ -1.25
POLR2A-204ENST00000575547 DTWD2Q8NBA8 298 aa7.22□□□□□ -1.25
POLR2A-204ENST00000575547 ST13P5Q8NFI4 369 aaPredicted RBP7.22□□□□□ -1.25
POLR2A-204ENST00000575547 LNX1Q8TBB1 728 aaPredicted RBP7.22□□□□□ -1.25
POLR2A-204ENST00000575547 KCNG4Q8TDN1 519 aa7.22□□□□□ -1.25
POLR2A-204ENST00000575547 SNX29Q8TEQ0 813 aa7.22□□□□□ -1.25
POLR2A-204ENST00000575547 NKD2Q969F2 451 aaPredicted RBP7.22□□□□□ -1.25
POLR2A-204ENST00000575547 ZNF707Q96C28 371 aaPredicted RBP7.22□□□□□ -1.25
POLR2A-204ENST00000575547 CLSTN3Q9BQT9 956 aa7.22□□□□□ -1.25
POLR2A-204ENST00000575547 KIFC3Q9BVG8 833 aa7.22□□□□□ -1.25
POLR2A-204ENST00000575547 CCDC94Q9BW85 323 aaPredicted RBP7.22□□□□□ -1.25
POLR2A-204ENST00000575547 DDX19AQ9NUU7 478 aaKnown RBP7.22□□□□□ -1.25
POLR2A-204ENST00000575547 KCNG1Q9UIX4 513 aa7.22□□□□□ -1.25
POLR2A-204ENST00000575547 ZFP37Q9Y6Q3 630 aaPredicted RBP7.22□□□□□ -1.25
POLR2A-204ENST00000575547 TDRD15B5MCY1 1934 aaKnown RBP7.22□□□□□ -1.25
POLR2A-204ENST00000575547 E9PMD0 336 aa7.21□□□□□ -1.26
POLR2A-204ENST00000575547 PTGESO14684 152 aa7.21□□□□□ -1.26
POLR2A-204ENST00000575547 C8AP07357 584 aa7.21□□□□□ -1.26
POLR2A-204ENST00000575547 HNRNPA1P09651 372 aaKnown RBP eCLIP7.21□□□□□ -1.26
POLR2A-204ENST00000575547 SRFP11831 508 aa7.21□□□□□ -1.26
POLR2A-204ENST00000575547 FXR2P51116 673 aaKnown RBP eCLIP7.21□□□□□ -1.264e-12■■■■■ 31.4
POLR2A-204ENST00000575547 CLCNKBP51801 687 aa7.21□□□□□ -1.26
POLR2A-204ENST00000575547 OSTNP61366 133 aa7.21□□□□□ -1.26
POLR2A-204ENST00000575547 NTHL1P78549 312 aa7.21□□□□□ -1.26
POLR2A-204ENST00000575547 ST3GAL1Q11201 340 aa7.21□□□□□ -1.26
POLR2A-204ENST00000575547 NBR1Q14596 966 aa7.21□□□□□ -1.26
POLR2A-204ENST00000575547 ECM1Q16610 540 aa7.21□□□□□ -1.26
POLR2A-204ENST00000575547 UVSSAQ2YD98 709 aa7.21□□□□□ -1.26
POLR2A-204ENST00000575547 GLRA4Q5JXX5 417 aa7.21□□□□□ -1.26
POLR2A-204ENST00000575547 SPECC1Q5M775 1068 aa7.21□□□□□ -1.26
POLR2A-204ENST00000575547 AXDND1Q5T1B0 1012 aaPredicted RBP7.21□□□□□ -1.26
POLR2A-204ENST00000575547 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.21□□□□□ -1.26
POLR2A-204ENST00000575547 C4orf32Q8N8J7 132 aa7.21□□□□□ -1.26
POLR2A-204ENST00000575547 PIK3R5Q8WYR1 880 aa7.21□□□□□ -1.26
POLR2A-204ENST00000575547 DDX27Q96GQ7 796 aaKnown RBP7.21□□□□□ -1.26
POLR2A-204ENST00000575547 UROC1Q96N76 676 aa7.21□□□□□ -1.26
POLR2A-204ENST00000575547 ACAP3Q96P50 834 aa7.21□□□□□ -1.26
POLR2A-204ENST00000575547 MRPL4Q9BYD3 311 aaKnown RBP7.21□□□□□ -1.26
POLR2A-204ENST00000575547 CCDC113Q9H0I3 377 aa7.21□□□□□ -1.26
POLR2A-204ENST00000575547 CXCL16Q9H2A7 254 aa7.21□□□□□ -1.26
POLR2A-204ENST00000575547 TMEM134Q9H6X4 195 aa7.21□□□□□ -1.26
POLR2A-204ENST00000575547 KMT5AQ9NQR1 393 aa7.21□□□□□ -1.26
POLR2A-204ENST00000575547 TOPORSQ9NS56 1045 aaPredicted RBP7.21□□□□□ -1.26
POLR2A-204ENST00000575547 CDH7Q9ULB5 785 aa7.21□□□□□ -1.26
POLR2A-204ENST00000575547 KIF3AQ9Y496 699 aa7.21□□□□□ -1.26
POLR2A-204ENST00000575547 RBM19Q9Y4C8 960 aaKnown RBP7.21□□□□□ -1.26
POLR2A-204ENST00000575547 PTPRZ1P23471 2315 aaPredicted RBP7.21□□□□□ -1.26
POLR2A-204ENST00000575547 ARID2Q68CP9 1835 aa7.2□□□□□ -1.26
POLR2A-204ENST00000575547 SMIM28A0A1B0GU29 152 aa7.2□□□□□ -1.26
POLR2A-204ENST00000575547 KRBA1A5PL33 1030 aa7.2□□□□□ -1.26
POLR2A-204ENST00000575547 SFI1A8K8P3 1242 aa7.2□□□□□ -1.26
POLR2A-204ENST00000575547 PROB1E7EW31 1015 aa7.2□□□□□ -1.26
POLR2A-204ENST00000575547 LAD1O00515 517 aa7.2□□□□□ -1.26
POLR2A-204ENST00000575547 ADAM12O43184 909 aa7.2□□□□□ -1.26
POLR2A-204ENST00000575547 HIP1RO75146 1068 aa7.2□□□□□ -1.26
POLR2A-204ENST00000575547 HARSP12081 509 aaKnown RBP7.2□□□□□ -1.26
POLR2A-204ENST00000575547 FGFR3P22607 806 aa7.2□□□□□ -1.26
POLR2A-204ENST00000575547 MARCKSP29966 332 aaPredicted RBP7.2□□□□□ -1.26
POLR2A-204ENST00000575547 CDC25AP30304 524 aa7.2□□□□□ -1.26
POLR2A-204ENST00000575547 NBL1P41271 181 aa7.2□□□□□ -1.26
POLR2A-204ENST00000575547 MATR3P43243 847 aaKnown RBP eCLIP7.2□□□□□ -1.26
POLR2A-204ENST00000575547 NPTX2P47972 431 aa7.2□□□□□ -1.26
POLR2A-204ENST00000575547 TOB1P50616 345 aaPredicted RBP7.2□□□□□ -1.26
POLR2A-204ENST00000575547 SMTNP53814 917 aa7.2□□□□□ -1.26
POLR2A-204ENST00000575547 ARPP19P56211 112 aa7.2□□□□□ -1.26
POLR2A-204ENST00000575547 STRN3Q13033 797 aa7.2□□□□□ -1.26
POLR2A-204ENST00000575547 DMP1Q13316 513 aaPredicted RBP7.2□□□□□ -1.26
POLR2A-204ENST00000575547 RAB33AQ14088 237 aa7.2□□□□□ -1.26
POLR2A-204ENST00000575547 ANGPT1Q15389 498 aa7.2□□□□□ -1.26
POLR2A-204ENST00000575547 ZNF568Q3ZCX4 644 aa7.2□□□□□ -1.26
POLR2A-204ENST00000575547 CWF19L1Q69YN2 538 aaKnown RBP7.2□□□□□ -1.26
POLR2A-204ENST00000575547 RINT1Q6NUQ1 792 aa7.2□□□□□ -1.26
POLR2A-204ENST00000575547 ANKS3Q6ZW76 656 aa7.2□□□□□ -1.26
POLR2A-204ENST00000575547 MTSS1LQ765P7 747 aa7.2□□□□□ -1.26
POLR2A-204ENST00000575547 ASCL5Q7RTU5 278 aa7.2□□□□□ -1.26
POLR2A-204ENST00000575547 FRMD5Q7Z6J6 570 aa7.2□□□□□ -1.26
POLR2A-204ENST00000575547 CCDC105Q8IYK2 499 aa7.2□□□□□ -1.26
POLR2A-204ENST00000575547 SLC7A14Q8TBB6 771 aa7.2□□□□□ -1.26
POLR2A-204ENST00000575547 GPR152Q8TDT2 470 aa7.2□□□□□ -1.26
POLR2A-204ENST00000575547 SHDQ96IW2 340 aa7.2□□□□□ -1.26
POLR2A-204ENST00000575547 CDK5RAP3Q96JB5 506 aa7.2□□□□□ -1.26
POLR2A-204ENST00000575547 DRC1Q96MC2 740 aa7.2□□□□□ -1.26
POLR2A-204ENST00000575547 ACO2Q99798 780 aaKnown RBP7.2□□□□□ -1.26
POLR2A-204ENST00000575547 RPP25Q9BUL9 199 aaKnown RBP7.2□□□□□ -1.26
POLR2A-204ENST00000575547 TARS2Q9BW92 718 aaKnown RBP7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms