RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 LAIR1Q6GTX8 287 aa9.98□□□□□ -0.81
SMG6-218ENST00000575454 PRSS55Q6UWB4 352 aaPredicted RBP9.98□□□□□ -0.81
SMG6-218ENST00000575454 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.98□□□□□ -0.81
SMG6-218ENST00000575454 NEK8Q86SG6 692 aa9.98□□□□□ -0.81
SMG6-218ENST00000575454 ST13P5Q8NFI4 369 aaPredicted RBP9.98□□□□□ -0.81
SMG6-218ENST00000575454 ITFG1Q8TB96 612 aa9.98□□□□□ -0.81
SMG6-218ENST00000575454 SLC7A14Q8TBB6 771 aa9.98□□□□□ -0.81
SMG6-218ENST00000575454 NETO1Q8TDF5 533 aa9.98□□□□□ -0.81
SMG6-218ENST00000575454 DDX1Q92499 740 aaKnown RBP9.98□□□□□ -0.81
SMG6-218ENST00000575454 DNASE1L2Q92874 299 aa9.98□□□□□ -0.81
SMG6-218ENST00000575454 PRIMPOLQ96LW4 560 aa9.98□□□□□ -0.81
SMG6-218ENST00000575454 CCDC43Q96MW1 224 aaKnown RBP9.98□□□□□ -0.81
SMG6-218ENST00000575454 KXD1Q9BQD3 176 aa9.98□□□□□ -0.81
SMG6-218ENST00000575454 NXF3Q9H4D5 531 aaKnown RBP9.98□□□□□ -0.81
SMG6-218ENST00000575454 BMP2KQ9NSY1 1161 aaPredicted RBP9.98□□□□□ -0.81
SMG6-218ENST00000575454 WRAP73Q9P2S5 460 aaPredicted RBP9.98□□□□□ -0.81
SMG6-218ENST00000575454 MRPS23Q9Y3D9 190 aaKnown RBP9.98□□□□□ -0.81
SMG6-218ENST00000575454 FAM208BQ5VWN6 2430 aa9.97□□□□□ -0.81
SMG6-218ENST00000575454 DCDC2BA2VCK2 349 aa9.97□□□□□ -0.81
SMG6-218ENST00000575454 TRAPPC3O43617 180 aa9.97□□□□□ -0.81
SMG6-218ENST00000575454 CCNT1O60563 726 aaKnown RBP9.97□□□□□ -0.81
SMG6-218ENST00000575454 CDC45O75419 566 aa9.97□□□□□ -0.81
SMG6-218ENST00000575454 LYPLA2O95372 231 aa9.97□□□□□ -0.81
SMG6-218ENST00000575454 NPTXRO95502 500 aa9.97□□□□□ -0.81
SMG6-218ENST00000575454 THP07101 528 aa9.97□□□□□ -0.81
SMG6-218ENST00000575454 RETP07949 1114 aa9.97□□□□□ -0.81
SMG6-218ENST00000575454 CD72P21854 359 aa9.97□□□□□ -0.81
SMG6-218ENST00000575454 TGM1P22735 817 aa9.97□□□□□ -0.81
SMG6-218ENST00000575454 TARSP26639 723 aaKnown RBP9.97□□□□□ -0.81
SMG6-218ENST00000575454 ARL2P36404 184 aa9.97□□□□□ -0.81
SMG6-218ENST00000575454 NCAPH2Q6IBW4 605 aa9.97□□□□□ -0.81
SMG6-218ENST00000575454 TPH2Q8IWU9 490 aa9.97□□□□□ -0.81
SMG6-218ENST00000575454 NPAS3Q8IXF0 933 aa9.97□□□□□ -0.81
SMG6-218ENST00000575454 ELSPBP1Q96BH3 223 aa9.97□□□□□ -0.81
SMG6-218ENST00000575454 DYDC2Q96IM9 177 aa9.97□□□□□ -0.81
SMG6-218ENST00000575454 NCOA5Q9HCD5 579 aaKnown RBP9.97□□□□□ -0.81
SMG6-218ENST00000575454 AVENQ9NQS1 362 aaPredicted RBP9.97□□□□□ -0.81
SMG6-218ENST00000575454 ANKEF1Q9NU02 776 aa9.97□□□□□ -0.81
SMG6-218ENST00000575454 PRMT7Q9NVM4 692 aaPredicted RBP9.97□□□□□ -0.81
SMG6-218ENST00000575454 RGL1Q9NZL6 768 aa9.97□□□□□ -0.81
SMG6-218ENST00000575454 KLK14Q9P0G3 267 aa9.97□□□□□ -0.81
SMG6-218ENST00000575454 ZNF197O14709 1029 aa9.96□□□□□ -0.82
SMG6-218ENST00000575454 SLC30A4O14863 429 aa9.96□□□□□ -0.82
SMG6-218ENST00000575454 CDKL5O76039 1030 aa9.96□□□□□ -0.82
SMG6-218ENST00000575454 MICAL2O94851 1124 aa9.96□□□□□ -0.82
SMG6-218ENST00000575454 SLITRK3O94933 977 aa9.96□□□□□ -0.82
SMG6-218ENST00000575454 KIF4AO95239 1232 aa9.96□□□□□ -0.82
SMG6-218ENST00000575454 XRCC6P12956 609 aaKnown RBP eCLIP9.96□□□□□ -0.82
SMG6-218ENST00000575454 HSPA4P34932 840 aa9.96□□□□□ -0.82
SMG6-218ENST00000575454 OR1D2P34982 312 aa9.96□□□□□ -0.82
SMG6-218ENST00000575454 CCR3P51677 355 aa9.96□□□□□ -0.82
SMG6-218ENST00000575454 CYP4A11Q02928 519 aa9.96□□□□□ -0.82
SMG6-218ENST00000575454 SPIRE1Q08AE8 756 aa9.96□□□□□ -0.82
SMG6-218ENST00000575454 MTAPQ13126 283 aa9.96□□□□□ -0.82
SMG6-218ENST00000575454 CAPSQ13938 189 aa9.96□□□□□ -0.82
SMG6-218ENST00000575454 CTTNQ14247 550 aaKnown RBP9.96□□□□□ -0.82
SMG6-218ENST00000575454 C1orf228Q6PIY5 440 aa9.96□□□□□ -0.82
SMG6-218ENST00000575454 PPP4R3CPQ6ZMV5 832 aa9.96□□□□□ -0.82
SMG6-218ENST00000575454 ANKS3Q6ZW76 656 aa9.96□□□□□ -0.82
SMG6-218ENST00000575454 ZBTB8OSQ8IWT0 167 aa9.96□□□□□ -0.82
SMG6-218ENST00000575454 RABGGTAQ92696 567 aa9.96□□□□□ -0.82
SMG6-218ENST00000575454 IRF7Q92985 503 aa9.96□□□□□ -0.82
SMG6-218ENST00000575454 ZNF274Q96GC6 653 aaPredicted RBP9.96□□□□□ -0.82
SMG6-218ENST00000575454 CHAMP1Q96JM3 812 aa9.96□□□□□ -0.82
SMG6-218ENST00000575454 CHRDQ9H2X0 955 aa9.96□□□□□ -0.82
SMG6-218ENST00000575454 TRPV5Q9NQA5 729 aa9.96□□□□□ -0.82
SMG6-218ENST00000575454 XPNPEP1Q9NQW7 623 aa9.96□□□□□ -0.82
SMG6-218ENST00000575454 DNMT3BQ9UBC3 853 aaKnown RBP9.96□□□□□ -0.82
SMG6-218ENST00000575454 SNX14Q9Y5W7 946 aa9.96□□□□□ -0.82
SMG6-218ENST00000575454 BACE2Q9Y5Z0 518 aa9.96□□□□□ -0.82
SMG6-218ENST00000575454 CASTOR2A6NHX0 329 aa9.95□□□□□ -0.82
SMG6-218ENST00000575454 N4BP3O15049 544 aa9.95□□□□□ -0.82
SMG6-218ENST00000575454 B4GALT5O43286 388 aa9.95□□□□□ -0.82
SMG6-218ENST00000575454 RHOP08100 348 aa9.95□□□□□ -0.82
SMG6-218ENST00000575454 PTPN2P17706 415 aa9.95□□□□□ -0.82
SMG6-218ENST00000575454 FGFR3P22607 806 aa9.95□□□□□ -0.82
SMG6-218ENST00000575454 GLRA2P23416 452 aa9.95□□□□□ -0.82
SMG6-218ENST00000575454 ELF1P32519 619 aa9.95□□□□□ -0.82
SMG6-218ENST00000575454 CNR2P34972 360 aa9.95□□□□□ -0.82
SMG6-218ENST00000575454 RBM25P49756 843 aaKnown RBP9.95□□□□□ -0.82
SMG6-218ENST00000575454 FZD5Q13467 585 aa9.95□□□□□ -0.82
SMG6-218ENST00000575454 NPY5RQ15761 445 aa9.95□□□□□ -0.82
SMG6-218ENST00000575454 FAM187BQ17R55 369 aa9.95□□□□□ -0.82
SMG6-218ENST00000575454 TMEM132AQ24JP5 1023 aa9.95□□□□□ -0.82
SMG6-218ENST00000575454 TSSK4Q6SA08 328 aa9.95□□□□□ -0.82
SMG6-218ENST00000575454 APBB1IPQ7Z5R6 666 aaPredicted RBP9.95□□□□□ -0.82
SMG6-218ENST00000575454 ASAP3Q8TDY4 903 aa9.95□□□□□ -0.82
SMG6-218ENST00000575454 HASPINQ8TF76 798 aa9.95□□□□□ -0.82
SMG6-218ENST00000575454 HAS1Q92839 578 aa9.95□□□□□ -0.82
SMG6-218ENST00000575454 MCRS1Q96EZ8 462 aa9.95□□□□□ -0.82
SMG6-218ENST00000575454 UROC1Q96N76 676 aa9.95□□□□□ -0.82
SMG6-218ENST00000575454 HSD17B14Q9BPX1 270 aa9.95□□□□□ -0.82
SMG6-218ENST00000575454 PAAF1Q9BRP4 392 aa9.95□□□□□ -0.82
SMG6-218ENST00000575454 ADPGKQ9BRR6 497 aa9.95□□□□□ -0.82
SMG6-218ENST00000575454 TRMT61BQ9BVS5 477 aaKnown RBP9.95□□□□□ -0.82
SMG6-218ENST00000575454 BRD9Q9H8M2 597 aa9.95□□□□□ -0.82
SMG6-218ENST00000575454 ZFP14Q9HCL3 533 aa9.95□□□□□ -0.82
SMG6-218ENST00000575454 HEBP1Q9NRV9 189 aa9.95□□□□□ -0.82
SMG6-218ENST00000575454 MTRRQ9UBK8 725 aa9.95□□□□□ -0.82
SMG6-218ENST00000575454 MYO10Q9HD67 2058 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms