RNA–Protein interactions for RNA: ENST00000574933.1

CCDC40-213, Transcript of coiled-coil domain containing 40, humanhuman

TSL 3

Gene CCDC40, Length 326 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-213ENST00000574933 NR2F2P24468 414 aa19.78■□□□□ 0.76
CCDC40-213ENST00000574933 GATMP50440 423 aa19.78■□□□□ 0.76
CCDC40-213ENST00000574933 CYP2J2P51589 502 aa19.78■□□□□ 0.76
CCDC40-213ENST00000574933 ADAM9Q13443 819 aa19.78■□□□□ 0.76
CCDC40-213ENST00000574933 ZSCAN23Q3MJ62 389 aa19.78■□□□□ 0.76
CCDC40-213ENST00000574933 FAM117BQ6P1L5 589 aa19.78■□□□□ 0.76
CCDC40-213ENST00000574933 LRRC55Q6ZSA7 311 aa19.78■□□□□ 0.76
CCDC40-213ENST00000574933 MFSD14AQ96MC6 490 aa19.78■□□□□ 0.76
CCDC40-213ENST00000574933 MKNK1Q9BUB5 465 aa19.78■□□□□ 0.76
CCDC40-213ENST00000574933 MRPL9Q9BYD2 267 aaKnown RBP19.78■□□□□ 0.76
CCDC40-213ENST00000574933 ASB7Q9H672 318 aa19.78■□□□□ 0.76
CCDC40-213ENST00000574933 SCN1AP35498 2009 aa19.77■□□□□ 0.76
CCDC40-213ENST00000574933 SYCE3A1L190 88 aa19.77■□□□□ 0.76
CCDC40-213ENST00000574933 GOLGA8IPA6NC78 632 aa19.77■□□□□ 0.76
CCDC40-213ENST00000574933 GOLGA8JA6NMD2 632 aa19.77■□□□□ 0.76
CCDC40-213ENST00000574933 TBKBP1A7MCY6 615 aa19.77■□□□□ 0.76
CCDC40-213ENST00000574933 GRXCR1A8MXD5 290 aa19.77■□□□□ 0.76
CCDC40-213ENST00000574933 PTGESO14684 152 aa19.77■□□□□ 0.76
CCDC40-213ENST00000574933 CETN3O15182 167 aa19.77■□□□□ 0.76
CCDC40-213ENST00000574933 TLL1O43897 1013 aa19.77■□□□□ 0.76
CCDC40-213ENST00000574933 EXOC3O60645 756 aa19.77■□□□□ 0.76
CCDC40-213ENST00000574933 IL18RAPO95256 599 aa19.77■□□□□ 0.76
CCDC40-213ENST00000574933 CCDC192P0DO97 292 aa19.77■□□□□ 0.76
CCDC40-213ENST00000574933 IBSPP21815 317 aaPredicted RBP19.77■□□□□ 0.76
CCDC40-213ENST00000574933 MLH1P40692 756 aa19.77■□□□□ 0.76
CCDC40-213ENST00000574933 SMAD3P84022 425 aaKnown RBP19.77■□□□□ 0.76
CCDC40-213ENST00000574933 ENPEPQ07075 957 aa19.77■□□□□ 0.76
CCDC40-213ENST00000574933 SNRNP35Q16560 246 aaKnown RBP19.77■□□□□ 0.76
CCDC40-213ENST00000574933 CBWD2Q8IUF1 395 aa19.77■□□□□ 0.76
CCDC40-213ENST00000574933 ABI1Q8IZP0 508 aa19.77■□□□□ 0.76
CCDC40-213ENST00000574933 ZFP42Q96MM3 310 aa19.77■□□□□ 0.76
CCDC40-213ENST00000574933 CEP63Q96MT8 703 aa19.77■□□□□ 0.76
CCDC40-213ENST00000574933 YME1L1Q96TA2 773 aa19.77■□□□□ 0.76
CCDC40-213ENST00000574933 ZBED2Q9BTP6 218 aa19.77■□□□□ 0.76
CCDC40-213ENST00000574933 MIOSQ9NXC5 875 aa19.77■□□□□ 0.76
CCDC40-213ENST00000574933 KLK14Q9P0G3 267 aa19.77■□□□□ 0.76
CCDC40-213ENST00000574933 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.77■□□□□ 0.76
CCDC40-213ENST00000574933 SMIM28A0A1B0GU29 152 aa19.76■□□□□ 0.75
CCDC40-213ENST00000574933 LACTBL1A8MY62 500 aa19.76■□□□□ 0.75
CCDC40-213ENST00000574933 CASP4P49662 377 aa19.76■□□□□ 0.75
CCDC40-213ENST00000574933 AFF1P51825 1210 aaKnown RBP19.76■□□□□ 0.75
CCDC40-213ENST00000574933 PPP2R3AQ06190 1150 aa19.76■□□□□ 0.75
CCDC40-213ENST00000574933 GRIK3Q13003 919 aa19.76■□□□□ 0.75
CCDC40-213ENST00000574933 NAB2Q15742 525 aa19.76■□□□□ 0.75
CCDC40-213ENST00000574933 RAB30Q15771 203 aa19.76■□□□□ 0.75
CCDC40-213ENST00000574933 NT5DC4Q86YG4 428 aa19.76■□□□□ 0.75
CCDC40-213ENST00000574933 LRRC43Q8N309 656 aa19.76■□□□□ 0.75
CCDC40-213ENST00000574933 URGCPQ8TCY9 931 aa19.76■□□□□ 0.75
CCDC40-213ENST00000574933 PPP1R10Q96QC0 940 aaKnown RBP19.76■□□□□ 0.75
CCDC40-213ENST00000574933 RPS6KC1Q96S38 1066 aa19.76■□□□□ 0.75
CCDC40-213ENST00000574933 CXCL16Q9H2A7 254 aa19.76■□□□□ 0.75
CCDC40-213ENST00000574933 TBC1D13Q9NVG8 400 aa19.76■□□□□ 0.75
CCDC40-213ENST00000574933 DERAQ9Y315 318 aa19.76■□□□□ 0.75
CCDC40-213ENST00000574933 SLC16A3O15427 465 aaKnown RBP19.75■□□□□ 0.75
CCDC40-213ENST00000574933 SCNN1GP51170 649 aa19.75■□□□□ 0.75
CCDC40-213ENST00000574933 RABGGTBP53611 331 aa19.75■□□□□ 0.75
CCDC40-213ENST00000574933 STX17P56962 302 aa19.75■□□□□ 0.75
CCDC40-213ENST00000574933 CYP24A1Q07973 514 aa19.75■□□□□ 0.75
CCDC40-213ENST00000574933 DSC1Q08554 894 aa19.75■□□□□ 0.75
CCDC40-213ENST00000574933 PSMD6Q15008 389 aa19.75■□□□□ 0.75
CCDC40-213ENST00000574933 SURF1Q15526 300 aa19.75■□□□□ 0.75
CCDC40-213ENST00000574933 ZBTB6Q15916 424 aa19.75■□□□□ 0.75
CCDC40-213ENST00000574933 C11orf57Q6ZUT1 292 aaPredicted RBP19.75■□□□□ 0.75
CCDC40-213ENST00000574933 FILIP1Q7Z7B0 1213 aa19.75■□□□□ 0.75
CCDC40-213ENST00000574933 ENOX1Q8TC92 643 aaKnown RBP19.75■□□□□ 0.75
CCDC40-213ENST00000574933 CLP1Q92989 425 aaKnown RBP19.75■□□□□ 0.75
CCDC40-213ENST00000574933 BORCS6Q96GS4 357 aa19.75■□□□□ 0.75
CCDC40-213ENST00000574933 ZMAT2Q96NC0 199 aaKnown RBP19.75■□□□□ 0.75
CCDC40-213ENST00000574933 PBX4Q9BYU1 374 aa19.75■□□□□ 0.75
CCDC40-213ENST00000574933 CWH43Q9H720 699 aa19.75■□□□□ 0.75
CCDC40-213ENST00000574933 RBAKQ9NYW8 714 aaPredicted RBP19.75■□□□□ 0.75
CCDC40-213ENST00000574933 INPP5FQ9Y2H2 1132 aa19.75■□□□□ 0.75
CCDC40-213ENST00000574933 FRMD4BQ9Y2L6 1034 aa19.75■□□□□ 0.75
CCDC40-213ENST00000574933 C2CD2Q9Y426 696 aa19.75■□□□□ 0.75
CCDC40-213ENST00000574933 AKAP3O75969 853 aa19.74■□□□□ 0.75
CCDC40-213ENST00000574933 THP07101 528 aa19.74■□□□□ 0.75
CCDC40-213ENST00000574933 LINC00271P0C7V0 271 aa19.74■□□□□ 0.75
CCDC40-213ENST00000574933 PSMC2P35998 433 aaKnown RBP19.74■□□□□ 0.75
CCDC40-213ENST00000574933 WNT7BP56706 349 aa19.74■□□□□ 0.75
CCDC40-213ENST00000574933 BTG3Q14201 252 aaPredicted RBP19.74■□□□□ 0.75
CCDC40-213ENST00000574933 CSGALNACT2Q8N6G5 542 aa19.74■□□□□ 0.75
CCDC40-213ENST00000574933 TMC2Q8TDI7 906 aa19.74■□□□□ 0.75
CCDC40-213ENST00000574933 PLAGL2Q9UPG8 496 aa19.74■□□□□ 0.75
CCDC40-213ENST00000574933 CARNS1A5YM72 827 aa19.73■□□□□ 0.75
CCDC40-213ENST00000574933 FGFR1OPO95684 399 aaKnown RBP19.73■□□□□ 0.75
CCDC40-213ENST00000574933 CYP3A5P20815 502 aa19.73■□□□□ 0.75
CCDC40-213ENST00000574933 CLDN10P78369 228 aa19.73■□□□□ 0.75
CCDC40-213ENST00000574933 CEP135Q66GS9 1140 aa19.73■□□□□ 0.75
CCDC40-213ENST00000574933 FIBCD1Q8N539 461 aa19.73■□□□□ 0.75
CCDC40-213ENST00000574933 RDH13Q8NBN7 331 aa19.73■□□□□ 0.75
CCDC40-213ENST00000574933 PARD3BQ8TEW8 1205 aa19.73■□□□□ 0.75
CCDC40-213ENST00000574933 BPIFA3Q9BQP9 254 aa19.73■□□□□ 0.75
CCDC40-213ENST00000574933 GZF1Q9H116 711 aaPredicted RBP19.73■□□□□ 0.75
CCDC40-213ENST00000574933 DNAJC25Q9H1X3 360 aa19.73■□□□□ 0.75
CCDC40-213ENST00000574933 NRDE2Q9H7Z3 1164 aa19.73■□□□□ 0.75
CCDC40-213ENST00000574933 SLC38A7Q9NVC3 462 aa19.73■□□□□ 0.75
CCDC40-213ENST00000574933 MSRAQ9UJ68 235 aa19.73■□□□□ 0.75
CCDC40-213ENST00000574933 YBX2Q9Y2T7 364 aaKnown RBP19.73■□□□□ 0.75
CCDC40-213ENST00000574933 MRPL42Q9Y6G3 142 aaKnown RBP19.73■□□□□ 0.75
CCDC40-213ENST00000574933 LCHNA4D1U4 455 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 175.3 ms