RNA–Protein interactions for RNA: ENST00000574776.5

CTNS-209, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 4

Gene CTNS, Length 565 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-209ENST00000574776 PDIA5Q14554 519 aa16.76■□□□□ 0.27
CTNS-209ENST00000574776 ATF7IP2Q5U623 682 aa16.76■□□□□ 0.27
CTNS-209ENST00000574776 ST13P5Q8NFI4 369 aaPredicted RBP16.76■□□□□ 0.27
CTNS-209ENST00000574776 PIK3R5Q8WYR1 880 aa16.76■□□□□ 0.27
CTNS-209ENST00000574776 KIFAP3Q92845 792 aa16.76■□□□□ 0.27
CTNS-209ENST00000574776 DDX19AQ9NUU7 478 aaKnown RBP16.76■□□□□ 0.27
CTNS-209ENST00000574776 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.76■□□□□ 0.27
CTNS-209ENST00000574776 DOCK8Q8NF50 2099 aa16.76■□□□□ 0.27
CTNS-209ENST00000574776 PTPRZ1P23471 2315 aaPredicted RBP16.75■□□□□ 0.27
CTNS-209ENST00000574776 STK25O00506 426 aa16.75■□□□□ 0.27
CTNS-209ENST00000574776 ADAM12O43184 909 aa16.75■□□□□ 0.27
CTNS-209ENST00000574776 AOC1P19801 751 aa16.75■□□□□ 0.27
CTNS-209ENST00000574776 U2AF2P26368 475 aaKnown RBP eCLIP16.75■□□□□ 0.27
CTNS-209ENST00000574776 PSMD5Q16401 504 aa16.75■□□□□ 0.27
CTNS-209ENST00000574776 DCAF4L1Q3SXM0 396 aa16.75■□□□□ 0.27
CTNS-209ENST00000574776 GET4Q7L5D6 327 aaPredicted RBP16.75■□□□□ 0.27
CTNS-209ENST00000574776 SNX29Q8TEQ0 813 aa16.75■□□□□ 0.27
CTNS-209ENST00000574776 KIF2CQ99661 725 aa16.75■□□□□ 0.27
CTNS-209ENST00000574776 SH2B1Q9NRF2 756 aaPredicted RBP16.75■□□□□ 0.27
CTNS-209ENST00000574776 WNT16Q9UBV4 365 aa16.75■□□□□ 0.27
CTNS-209ENST00000574776 PCDHB6Q9Y5E3 794 aa16.75■□□□□ 0.27
CTNS-209ENST00000574776 CCDC169A6NNP5 214 aa16.74■□□□□ 0.27
CTNS-209ENST00000574776 E9PMD0 336 aa16.74■□□□□ 0.27
CTNS-209ENST00000574776 PEX3P56589 373 aa16.74■□□□□ 0.27
CTNS-209ENST00000574776 ELAVL2Q12926 359 aaKnown RBP16.74■□□□□ 0.27
CTNS-209ENST00000574776 GLRA4Q5JXX5 417 aa16.74■□□□□ 0.27
CTNS-209ENST00000574776 DCLRE1AQ6PJP8 1040 aa16.74■□□□□ 0.27
CTNS-209ENST00000574776 GRASPQ7Z6J2 395 aaPredicted RBP16.74■□□□□ 0.27
CTNS-209ENST00000574776 IGSF22Q8N9C0 903 aa16.74■□□□□ 0.27
CTNS-209ENST00000574776 NXPE3Q969Y0 559 aa16.74■□□□□ 0.27
CTNS-209ENST00000574776 FBXW11Q9UKB1 542 aa16.74■□□□□ 0.27
CTNS-209ENST00000574776 DNM3Q9UQ16 869 aa16.74■□□□□ 0.27
CTNS-209ENST00000574776 TRIP11Q15643 1979 aa16.74■□□□□ 0.27
CTNS-209ENST00000574776 KRBA1A5PL33 1030 aa16.73■□□□□ 0.27
CTNS-209ENST00000574776 PP2D1A8MPX8 630 aa16.73■□□□□ 0.27
CTNS-209ENST00000574776 PROB1E7EW31 1015 aa16.73■□□□□ 0.27
CTNS-209ENST00000574776 B3GAT3O94766 335 aa16.73■□□□□ 0.27
CTNS-209ENST00000574776 FSHRP23945 695 aa16.73■□□□□ 0.27
CTNS-209ENST00000574776 CDC25AP30304 524 aa16.73■□□□□ 0.27
CTNS-209ENST00000574776 OR1D2P34982 312 aa16.73■□□□□ 0.27
CTNS-209ENST00000574776 CLCNKBP51801 687 aa16.73■□□□□ 0.27
CTNS-209ENST00000574776 NTHL1P78549 312 aa16.73■□□□□ 0.27
CTNS-209ENST00000574776 IL17AQ16552 155 aa16.73■□□□□ 0.27
CTNS-209ENST00000574776 PPM1LQ5SGD2 360 aa16.73■□□□□ 0.27
CTNS-209ENST00000574776 LIN9Q5TKA1 542 aa16.73■□□□□ 0.27
CTNS-209ENST00000574776 PPP1R10Q96QC0 940 aaKnown RBP16.73■□□□□ 0.27
CTNS-209ENST00000574776 RTP3Q9BQQ7 232 aa16.73■□□□□ 0.27
CTNS-209ENST00000574776 RAB34Q9BZG1 259 aa16.73■□□□□ 0.27
CTNS-209ENST00000574776 CA14Q9ULX7 337 aa16.73■□□□□ 0.27
CTNS-209ENST00000574776 TNFSF13BQ9Y275 285 aa16.73■□□□□ 0.27
CTNS-209ENST00000574776 STK24Q9Y6E0 443 aa16.73■□□□□ 0.27
CTNS-209ENST00000574776 RIF1Q5UIP0 2472 aaKnown RBP16.73■□□□□ 0.27
CTNS-209ENST00000574776 SMIM28A0A1B0GU29 152 aa16.72■□□□□ 0.27
CTNS-209ENST00000574776 ANHXE9PGG2 379 aa16.72■□□□□ 0.27
CTNS-209ENST00000574776 CCL16O15467 120 aa16.72■□□□□ 0.27
CTNS-209ENST00000574776 C8AP07357 584 aa16.72■□□□□ 0.27
CTNS-209ENST00000574776 HNRNPA1P09651 372 aaKnown RBP eCLIP16.72■□□□□ 0.27
CTNS-209ENST00000574776 SRFP11831 508 aa16.72■□□□□ 0.27
CTNS-209ENST00000574776 FGFR3P22607 806 aa16.72■□□□□ 0.27
CTNS-209ENST00000574776 NBL1P41271 181 aa16.72■□□□□ 0.27
CTNS-209ENST00000574776 NPTX2P47972 431 aa16.72■□□□□ 0.27
CTNS-209ENST00000574776 OSTNP61366 133 aa16.72■□□□□ 0.27
CTNS-209ENST00000574776 KRT79Q5XKE5 535 aa16.72■□□□□ 0.27
CTNS-209ENST00000574776 PDXDC1Q6P996 788 aa16.72■□□□□ 0.27
CTNS-209ENST00000574776 CD300LGQ6UXG3 332 aa16.72■□□□□ 0.27
CTNS-209ENST00000574776 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.72■□□□□ 0.27
CTNS-209ENST00000574776 ASCL5Q7RTU5 278 aa16.72■□□□□ 0.27
CTNS-209ENST00000574776 APBB1IPQ7Z5R6 666 aaPredicted RBP16.72■□□□□ 0.27
CTNS-209ENST00000574776 DAW1Q8N136 415 aa16.72■□□□□ 0.27
CTNS-209ENST00000574776 CEP120Q8N960 986 aa16.72■□□□□ 0.27
CTNS-209ENST00000574776 DTWD2Q8NBA8 298 aa16.72■□□□□ 0.27
CTNS-209ENST00000574776 GPR152Q8TDT2 470 aa16.72■□□□□ 0.27
CTNS-209ENST00000574776 ACO2Q99798 780 aaKnown RBP16.72■□□□□ 0.27
CTNS-209ENST00000574776 RPP25Q9BUL9 199 aaKnown RBP16.72■□□□□ 0.27
CTNS-209ENST00000574776 GOLGA2P5Q9HBQ8 144 aa16.72■□□□□ 0.27
CTNS-209ENST00000574776 POLIQ9UNA4 740 aa16.72■□□□□ 0.27
CTNS-209ENST00000574776 NUMBLQ9Y6R0 609 aa16.72■□□□□ 0.27
CTNS-209ENST00000574776 VWA8A3KMH1 1905 aa16.72■□□□□ 0.27
CTNS-209ENST00000574776 MYO15AQ9UKN7 3530 aa16.71■□□□□ 0.27
CTNS-209ENST00000574776 SFI1A8K8P3 1242 aa16.71■□□□□ 0.27
CTNS-209ENST00000574776 TMEM189-UBE2V1I3L0A0 370 aa16.71■□□□□ 0.27
CTNS-209ENST00000574776 I3L4J1 428 aa16.71■□□□□ 0.27
CTNS-209ENST00000574776 HIP1RO75146 1068 aa16.71■□□□□ 0.27
CTNS-209ENST00000574776 RFX1P22670 979 aa16.71■□□□□ 0.27
CTNS-209ENST00000574776 HTR4Q13639 388 aa16.71■□□□□ 0.27
CTNS-209ENST00000574776 RAB33AQ14088 237 aa16.71■□□□□ 0.27
CTNS-209ENST00000574776 UPP1Q16831 310 aa16.71■□□□□ 0.27
CTNS-209ENST00000574776 AXDND1Q5T1B0 1012 aaPredicted RBP16.71■□□□□ 0.27
CTNS-209ENST00000574776 ALKAL1Q6UXT8 129 aa16.71■□□□□ 0.27
CTNS-209ENST00000574776 RSPO2Q6UXX9 243 aaPredicted RBP16.71■□□□□ 0.27
CTNS-209ENST00000574776 DTHD1Q6ZMT9 781 aa16.71■□□□□ 0.27
CTNS-209ENST00000574776 FRMD5Q7Z6J6 570 aa16.71■□□□□ 0.27
CTNS-209ENST00000574776 CCDC105Q8IYK2 499 aa16.71■□□□□ 0.27
CTNS-209ENST00000574776 RUSC1Q9BVN2 902 aa16.71■□□□□ 0.27
CTNS-209ENST00000574776 TARS2Q9BW92 718 aaKnown RBP16.71■□□□□ 0.27
CTNS-209ENST00000574776 TMEM134Q9H6X4 195 aa16.71■□□□□ 0.27
CTNS-209ENST00000574776 PTPRHQ9HD43 1115 aa16.71■□□□□ 0.27
CTNS-209ENST00000574776 DAXXQ9UER7 740 aaPredicted RBP16.71■□□□□ 0.27
CTNS-209ENST00000574776 LAD1O00515 517 aa16.7■□□□□ 0.26
CTNS-209ENST00000574776 TKTP29401 623 aaKnown RBP16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms