RNA–Protein interactions for RNA: ENST00000574099.1

CCDC40-211, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-211ENST00000574099 AXDND1Q5T1B0 1012 aaPredicted RBP19.43■□□□□ 0.7
CCDC40-211ENST00000574099 CCDC43Q96MW1 224 aaKnown RBP19.43■□□□□ 0.7
CCDC40-211ENST00000574099 POLR3FQ9H1D9 316 aaPredicted RBP19.43■□□□□ 0.7
CCDC40-211ENST00000574099 CXCL16Q9H2A7 254 aa19.43■□□□□ 0.7
CCDC40-211ENST00000574099 DNMT3BQ9UBC3 853 aaKnown RBP19.43■□□□□ 0.7
CCDC40-211ENST00000574099 EPG5Q9HCE0 2579 aa19.43■□□□□ 0.7
CCDC40-211ENST00000574099 KMT2BQ9UMN6 2715 aaPredicted RBP19.43■□□□□ 0.7
CCDC40-211ENST00000574099 ZMYM2Q9UBW7 1377 aa19.43■□□□□ 0.7
CCDC40-211ENST00000574099 TBX3O15119 743 aa19.42■□□□□ 0.7
CCDC40-211ENST00000574099 DTNBO60941 627 aa19.42■□□□□ 0.7
CCDC40-211ENST00000574099 SDHBP21912 280 aa19.42■□□□□ 0.7
CCDC40-211ENST00000574099 ARL2P36404 184 aa19.42■□□□□ 0.7
CCDC40-211ENST00000574099 MAGEA9P43362 315 aa19.42■□□□□ 0.7
CCDC40-211ENST00000574099 RSPO2Q6UXX9 243 aaPredicted RBP19.42■□□□□ 0.7
CCDC40-211ENST00000574099 MAEAQ7L5Y9 396 aa19.42■□□□□ 0.7
CCDC40-211ENST00000574099 GPR161Q8N6U8 529 aaKnown RBP19.42■□□□□ 0.7
CCDC40-211ENST00000574099 MCRS1Q96EZ8 462 aa19.42■□□□□ 0.7
CCDC40-211ENST00000574099 EIF2AK1Q9BQI3 630 aaKnown RBP19.42■□□□□ 0.7
CCDC40-211ENST00000574099 HEBP1Q9NRV9 189 aa19.42■□□□□ 0.7
CCDC40-211ENST00000574099 GJB4Q9NTQ9 266 aa19.42■□□□□ 0.7
CCDC40-211ENST00000574099 A0A087WWV3 80 aa19.41■□□□□ 0.7
CCDC40-211ENST00000574099 A0A1B0GUA9 196 aa19.41■□□□□ 0.7
CCDC40-211ENST00000574099 LRRIQ4A6NIV6 560 aa19.41■□□□□ 0.7
CCDC40-211ENST00000574099 PTGESO14684 152 aa19.41■□□□□ 0.7
CCDC40-211ENST00000574099 LILRB5O75023 590 aa19.41■□□□□ 0.7
CCDC40-211ENST00000574099 DGAT1O75907 488 aa19.41■□□□□ 0.7
CCDC40-211ENST00000574099 SLITRK3O94933 977 aa19.41■□□□□ 0.7
CCDC40-211ENST00000574099 POU5F1BQ06416 359 aa19.41■□□□□ 0.7
CCDC40-211ENST00000574099 LPAL2Q16609 132 aa19.41■□□□□ 0.7
CCDC40-211ENST00000574099 OXER1Q8TDS5 423 aa19.41■□□□□ 0.7
CCDC40-211ENST00000574099 CLDN23Q96B33 292 aa19.41■□□□□ 0.7
CCDC40-211ENST00000574099 BORCS6Q96GS4 357 aa19.41■□□□□ 0.7
CCDC40-211ENST00000574099 NFKBIZQ9BYH8 718 aa19.41■□□□□ 0.7
CCDC40-211ENST00000574099 PLA2G2FQ9BZM2 168 aa19.41■□□□□ 0.7
CCDC40-211ENST00000574099 PARD6AQ9NPB6 346 aa19.41■□□□□ 0.7
CCDC40-211ENST00000574099 SNTG2Q9NY99 539 aa19.41■□□□□ 0.7
CCDC40-211ENST00000574099 MRPS23Q9Y3D9 190 aaKnown RBP19.41■□□□□ 0.7
CCDC40-211ENST00000574099 TPRP12270 2363 aaKnown RBP19.41■□□□□ 0.7
CCDC40-211ENST00000574099 FAM205CA6NFA0 338 aa19.4■□□□□ 0.7
CCDC40-211ENST00000574099 PRR5-ARHGAP8B1AHC4 643 aa19.4■□□□□ 0.7
CCDC40-211ENST00000574099 NCAM2O15394 837 aa19.4■□□□□ 0.7
CCDC40-211ENST00000574099 USO1O60763 962 aaKnown RBP19.4■□□□□ 0.7
CCDC40-211ENST00000574099 RECQL4O94761 1208 aa19.4■□□□□ 0.7
CCDC40-211ENST00000574099 OR1D2P34982 312 aa19.4■□□□□ 0.7
CCDC40-211ENST00000574099 ARHGAP8P85298 464 aa19.4■□□□□ 0.7
CCDC40-211ENST00000574099 TMEM132AQ24JP5 1023 aa19.4■□□□□ 0.7
CCDC40-211ENST00000574099 EARS2Q5JPH6 523 aaKnown RBP19.4■□□□□ 0.7
CCDC40-211ENST00000574099 CPLX2Q6PUV4 134 aaKnown RBP19.4■□□□□ 0.7
CCDC40-211ENST00000574099 RUFY3Q7L099 469 aa19.4■□□□□ 0.7
CCDC40-211ENST00000574099 GPRC5CQ9NQ84 441 aa19.4■□□□□ 0.7
CCDC40-211ENST00000574099 PRMT8Q9NR22 394 aaPredicted RBP19.4■□□□□ 0.7
CCDC40-211ENST00000574099 GMEB2Q9UKD1 530 aa19.4■□□□□ 0.7
CCDC40-211ENST00000574099 NDRG2Q9UN36 371 aaKnown RBP19.4■□□□□ 0.7
CCDC40-211ENST00000574099 TTLL13PA6NNM8 815 aa19.39■□□□□ 0.69
CCDC40-211ENST00000574099 BAG4O95429 457 aaKnown RBP19.39■□□□□ 0.69
CCDC40-211ENST00000574099 THP07101 528 aa19.39■□□□□ 0.69
CCDC40-211ENST00000574099 IGFBP6P24592 240 aaPredicted RBP19.39■□□□□ 0.69
CCDC40-211ENST00000574099 ELAVL2Q12926 359 aaKnown RBP19.39■□□□□ 0.69
CCDC40-211ENST00000574099 MTAPQ13126 283 aa19.39■□□□□ 0.69
CCDC40-211ENST00000574099 RAB33AQ14088 237 aa19.39■□□□□ 0.69
CCDC40-211ENST00000574099 SLC5A9Q2M3M2 681 aa19.39■□□□□ 0.69
CCDC40-211ENST00000574099 ZNF852Q6ZMS4 543 aa19.39■□□□□ 0.69
CCDC40-211ENST00000574099 SLFN12Q8IYM2 578 aa19.39■□□□□ 0.69
CCDC40-211ENST00000574099 FAM177A1Q8N128 213 aaPredicted RBP19.39■□□□□ 0.69
CCDC40-211ENST00000574099 PIGOQ8TEQ8 1089 aa19.39■□□□□ 0.69
CCDC40-211ENST00000574099 NELL1Q92832 810 aa19.39■□□□□ 0.69
CCDC40-211ENST00000574099 KCNH3Q9ULD8 1083 aa19.39■□□□□ 0.69
CCDC40-211ENST00000574099 CDY1Q9Y6F8 540 aa19.39■□□□□ 0.69
CCDC40-211ENST00000574099 ECI2O75521 394 aa19.38■□□□□ 0.69
CCDC40-211ENST00000574099 RHOP08100 348 aa19.38■□□□□ 0.69
CCDC40-211ENST00000574099 CEBPBP17676 345 aa19.38■□□□□ 0.69
CCDC40-211ENST00000574099 LIG1P18858 919 aa19.38■□□□□ 0.69
CCDC40-211ENST00000574099 TGM1P22735 817 aa19.38■□□□□ 0.69
CCDC40-211ENST00000574099 RPS9P46781 194 aaKnown RBP19.38■□□□□ 0.69
CCDC40-211ENST00000574099 RARRES1P49788 294 aa19.38■□□□□ 0.69
CCDC40-211ENST00000574099 SPEM2Q0P670 501 aa19.38■□□□□ 0.69
CCDC40-211ENST00000574099 GRM2Q14416 872 aa19.38■□□□□ 0.69
CCDC40-211ENST00000574099 TANGO2Q6ICL3 276 aa19.38■□□□□ 0.69
CCDC40-211ENST00000574099 PDXDC1Q6P996 788 aa19.38■□□□□ 0.69
CCDC40-211ENST00000574099 POTEHQ6S545 545 aa19.38■□□□□ 0.69
CCDC40-211ENST00000574099 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.38■□□□□ 0.69
CCDC40-211ENST00000574099 NOSTRINQ8IVI9 506 aa19.38■□□□□ 0.69
CCDC40-211ENST00000574099 ZNF274Q96GC6 653 aaPredicted RBP19.38■□□□□ 0.69
CCDC40-211ENST00000574099 NELL2Q99435 816 aa19.38■□□□□ 0.69
CCDC40-211ENST00000574099 NAP1L4Q99733 375 aaKnown RBP19.38■□□□□ 0.69
CCDC40-211ENST00000574099 RTKNQ9BST9 563 aa19.38■□□□□ 0.69
CCDC40-211ENST00000574099 PDZD7Q9H5P4 517 aa19.38■□□□□ 0.69
CCDC40-211ENST00000574099 ANKEF1Q9NU02 776 aa19.38■□□□□ 0.69
CCDC40-211ENST00000574099 MTRRQ9UBK8 725 aa19.38■□□□□ 0.69
CCDC40-211ENST00000574099 USP20Q9Y2K6 914 aa19.38■□□□□ 0.69
CCDC40-211ENST00000574099 TICRRQ7Z2Z1 1910 aa19.37■□□□□ 0.69
CCDC40-211ENST00000574099 SHISA7A6NL88 538 aa19.37■□□□□ 0.69
CCDC40-211ENST00000574099 TBC1D4O60343 1298 aa19.37■□□□□ 0.69
CCDC40-211ENST00000574099 POU2F2P09086 479 aa19.37■□□□□ 0.69
CCDC40-211ENST00000574099 ADCY1Q08828 1119 aa19.37■□□□□ 0.69
CCDC40-211ENST00000574099 FZD5Q13467 585 aa19.37■□□□□ 0.69
CCDC40-211ENST00000574099 NAB2Q15742 525 aa19.37■□□□□ 0.69
CCDC40-211ENST00000574099 UVSSAQ2YD98 709 aa19.37■□□□□ 0.69
CCDC40-211ENST00000574099 GLRA4Q5JXX5 417 aa19.37■□□□□ 0.69
CCDC40-211ENST00000574099 ZSWIM6Q9HCJ5 1215 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms