RNA–Protein interactions for RNA: ENST00000573936.5

CHD3-216, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-216ENST00000573936 STK39Q9UEW8 545 aa12.04□□□□□ -0.48
CHD3-216ENST00000573936 GDAQ9Y2T3 454 aa12.04□□□□□ -0.48
CHD3-216ENST00000573936 STYXL1Q9Y6J8 313 aa12.04□□□□□ -0.48
CHD3-216ENST00000573936 PRR33A8MZF0 331 aa12.03□□□□□ -0.48
CHD3-216ENST00000573936 KIAA0391O15091 583 aaKnown RBP12.03□□□□□ -0.48
CHD3-216ENST00000573936 GADD45BO75293 160 aaPredicted RBP12.03□□□□□ -0.48
CHD3-216ENST00000573936 RHOBTB3O94955 611 aa12.03□□□□□ -0.48
CHD3-216ENST00000573936 SMC2O95347 1197 aa12.03□□□□□ -0.48
CHD3-216ENST00000573936 LDHAP00338 332 aaKnown RBP12.03□□□□□ -0.48
CHD3-216ENST00000573936 POMCP01189 267 aa12.03□□□□□ -0.48
CHD3-216ENST00000573936 THP07101 528 aa12.03□□□□□ -0.48
CHD3-216ENST00000573936 CLTAP09496 248 aa12.03□□□□□ -0.48
CHD3-216ENST00000573936 GARTP22102 1010 aa12.03□□□□□ -0.48
CHD3-216ENST00000573936 SCNN1GP51170 649 aa12.03□□□□□ -0.48
CHD3-216ENST00000573936 CASP5P51878 434 aa12.03□□□□□ -0.48
CHD3-216ENST00000573936 BCAR1P56945 870 aa12.03□□□□□ -0.48
CHD3-216ENST00000573936 POU5F1Q01860 360 aaKnown RBP12.03□□□□□ -0.48
CHD3-216ENST00000573936 PLCB3Q01970 1234 aa12.03□□□□□ -0.48
CHD3-216ENST00000573936 KRT17Q04695 432 aa12.03□□□□□ -0.48
CHD3-216ENST00000573936 UBE3AQ05086 875 aa12.03□□□□□ -0.48
CHD3-216ENST00000573936 HSP90AA2PQ14568 343 aaPredicted RBP12.03□□□□□ -0.48
CHD3-216ENST00000573936 EPM2AIP1Q7L775 607 aaPredicted RBP12.03□□□□□ -0.48
CHD3-216ENST00000573936 CD302Q8IX05 232 aa12.03□□□□□ -0.48
CHD3-216ENST00000573936 GJD3Q8N144 294 aa12.03□□□□□ -0.48
CHD3-216ENST00000573936 POMGNT1Q8WZA1 660 aa12.03□□□□□ -0.48
CHD3-216ENST00000573936 TSPAN18Q96SJ8 248 aa12.03□□□□□ -0.48
CHD3-216ENST00000573936 MSTO1Q9BUK6 570 aa12.03□□□□□ -0.48
CHD3-216ENST00000573936 UBE2ZQ9H832 354 aaPredicted RBP12.03□□□□□ -0.48
CHD3-216ENST00000573936 PLEKHA5Q9HAU0 1116 aa12.03□□□□□ -0.48
CHD3-216ENST00000573936 SLC39A2Q9NP94 309 aa12.03□□□□□ -0.48
CHD3-216ENST00000573936 MIOSQ9NXC5 875 aa12.03□□□□□ -0.48
CHD3-216ENST00000573936 SPG21Q9NZD8 308 aa12.03□□□□□ -0.48
CHD3-216ENST00000573936 KLK14Q9P0G3 267 aa12.03□□□□□ -0.48
CHD3-216ENST00000573936 CGNQ9P2M7 1197 aaKnown RBP12.03□□□□□ -0.48
CHD3-216ENST00000573936 PUF60Q9UHX1 559 aaKnown RBP12.03□□□□□ -0.48
CHD3-216ENST00000573936 FAN1Q9Y2M0 1017 aa12.03□□□□□ -0.48
CHD3-216ENST00000573936 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.03□□□□□ -0.48
CHD3-216ENST00000573936 NLRC5Q86WI3 1866 aa12.02□□□□□ -0.48
CHD3-216ENST00000573936 ANKRD63C9JTQ0 380 aa12.02□□□□□ -0.49
CHD3-216ENST00000573936 ZC3H11AO75152 810 aaKnown RBP eCLIP12.02□□□□□ -0.49
CHD3-216ENST00000573936 DDHD2O94830 711 aa12.02□□□□□ -0.49
CHD3-216ENST00000573936 GALTP07902 379 aa12.02□□□□□ -0.49
CHD3-216ENST00000573936 PRR29P0C7W0 189 aa12.02□□□□□ -0.49
CHD3-216ENST00000573936 KCNA5P22460 613 aa12.02□□□□□ -0.49
CHD3-216ENST00000573936 OSTNP61366 133 aa12.02□□□□□ -0.49
CHD3-216ENST00000573936 KCNA1Q09470 495 aa12.02□□□□□ -0.49
CHD3-216ENST00000573936 BMS1Q14692 1282 aaKnown RBP12.02□□□□□ -0.49
CHD3-216ENST00000573936 BMT2Q1RMZ1 405 aa12.02□□□□□ -0.49
CHD3-216ENST00000573936 PUS10Q3MIT2 529 aaKnown RBP12.02□□□□□ -0.49
CHD3-216ENST00000573936 XKR4Q5GH76 650 aa12.02□□□□□ -0.49
CHD3-216ENST00000573936 SLC39A4Q6P5W5 647 aa12.02□□□□□ -0.49
CHD3-216ENST00000573936 ALKAL1Q6UXT8 129 aa12.02□□□□□ -0.49
CHD3-216ENST00000573936 ZNF280BQ86YH2 543 aa12.02□□□□□ -0.49
CHD3-216ENST00000573936 COLGALT2Q8IYK4 626 aa12.02□□□□□ -0.49
CHD3-216ENST00000573936 KLHL23Q8NBE8 558 aa12.02□□□□□ -0.49
CHD3-216ENST00000573936 GSTCDQ8NEC7 633 aa12.02□□□□□ -0.49
CHD3-216ENST00000573936 KHSRPQ92945 711 aaKnown RBP eCLIP12.02□□□□□ -0.49
CHD3-216ENST00000573936 HPS3Q969F9 1004 aa12.02□□□□□ -0.49
CHD3-216ENST00000573936 ZFP42Q96MM3 310 aa12.02□□□□□ -0.49
CHD3-216ENST00000573936 GSDMAQ96QA5 445 aa12.02□□□□□ -0.49
CHD3-216ENST00000573936 FGFBP2Q9BYJ0 223 aa12.02□□□□□ -0.49
CHD3-216ENST00000573936 GBP3Q9H0R5 595 aa12.02□□□□□ -0.49
CHD3-216ENST00000573936 RPF1Q9H9Y2 349 aaKnown RBP12.02□□□□□ -0.49
CHD3-216ENST00000573936 SLC38A7Q9NVC3 462 aa12.02□□□□□ -0.49
CHD3-216ENST00000573936 AGO2Q9UKV8 859 aaKnown RBP12.02□□□□□ -0.49
CHD3-216ENST00000573936 PLAGL2Q9UPG8 496 aa12.02□□□□□ -0.49
CHD3-216ENST00000573936 LZTS1Q9Y250 596 aa12.02□□□□□ -0.49
CHD3-216ENST00000573936 FNDC1Q4ZHG4 1894 aaPredicted RBP12.02□□□□□ -0.49
CHD3-216ENST00000573936 MYO7AQ13402 2215 aa12.01□□□□□ -0.49
CHD3-216ENST00000573936 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.01□□□□□ -0.49
CHD3-216ENST00000573936 FGF18O76093 207 aa12.01□□□□□ -0.49
CHD3-216ENST00000573936 KCNE1P15382 129 aa12.01□□□□□ -0.49
CHD3-216ENST00000573936 OR1G1P47890 313 aa12.01□□□□□ -0.49
CHD3-216ENST00000573936 AFF1P51825 1210 aaKnown RBP12.01□□□□□ -0.49
CHD3-216ENST00000573936 DSC1Q08554 894 aa12.01□□□□□ -0.49
CHD3-216ENST00000573936 STK4Q13043 487 aa12.01□□□□□ -0.49
CHD3-216ENST00000573936 TUSC3Q13454 348 aa12.01□□□□□ -0.49
CHD3-216ENST00000573936 PNOCQ13519 176 aa12.01□□□□□ -0.49
CHD3-216ENST00000573936 KNOP1Q1ED39 458 aaKnown RBP12.01□□□□□ -0.49
CHD3-216ENST00000573936 LEXMQ3ZCV2 418 aa12.01□□□□□ -0.49
CHD3-216ENST00000573936 PTCRAQ6ISU1 281 aaPredicted RBP12.01□□□□□ -0.49
CHD3-216ENST00000573936 PDE12Q6L8Q7 609 aaKnown RBP12.01□□□□□ -0.49
CHD3-216ENST00000573936 ARMCX5Q6P1M9 558 aa12.01□□□□□ -0.49
CHD3-216ENST00000573936 EP400NLQ6ZTU2 488 aa12.01□□□□□ -0.49
CHD3-216ENST00000573936 HS2ST1Q7LGA3 356 aa12.01□□□□□ -0.49
CHD3-216ENST00000573936 SLC39A11Q8N1S5 342 aa12.01□□□□□ -0.49
CHD3-216ENST00000573936 CEP120Q8N960 986 aa12.01□□□□□ -0.49
CHD3-216ENST00000573936 GOLGA5Q8TBA6 731 aa12.01□□□□□ -0.49
CHD3-216ENST00000573936 SPPL3Q8TCT6 385 aa12.01□□□□□ -0.49
CHD3-216ENST00000573936 SCFD1Q8WVM8 642 aa12.01□□□□□ -0.49
CHD3-216ENST00000573936 SMARCE1Q969G3 411 aa12.01□□□□□ -0.49
CHD3-216ENST00000573936 MRPL38Q96DV4 380 aaKnown RBP12.01□□□□□ -0.49
CHD3-216ENST00000573936 TMEM169Q96HH4 297 aa12.01□□□□□ -0.49
CHD3-216ENST00000573936 SNX27Q96L92 541 aa12.01□□□□□ -0.49
CHD3-216ENST00000573936 UROC1Q96N76 676 aa12.01□□□□□ -0.49
CHD3-216ENST00000573936 COLEC11Q9BWP8 271 aa12.01□□□□□ -0.49
CHD3-216ENST00000573936 HAPLN2Q9GZV7 340 aa12.01□□□□□ -0.49
CHD3-216ENST00000573936 KIAA1586Q9HCI6 787 aa12.01□□□□□ -0.49
CHD3-216ENST00000573936 C11orf16Q9NQ32 467 aa12.01□□□□□ -0.49
CHD3-216ENST00000573936 CNTN3Q9P232 1028 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms