RNA–Protein interactions for RNA: ENST00000572656.2

TRAPPC1-205, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-205ENST00000572656 CATSPER3Q86XQ3 398 aa10.9□□□□□ -0.66
TRAPPC1-205ENST00000572656 DIS3L2Q8IYB7 885 aaKnown RBP10.9□□□□□ -0.66
TRAPPC1-205ENST00000572656 NECAB1Q8N987 351 aa10.9□□□□□ -0.66
TRAPPC1-205ENST00000572656 ITFG1Q8TB96 612 aa10.9□□□□□ -0.66
TRAPPC1-205ENST00000572656 FGF13Q92913 245 aa10.9□□□□□ -0.66
TRAPPC1-205ENST00000572656 NACC1Q96RE7 527 aa10.9□□□□□ -0.66
TRAPPC1-205ENST00000572656 DDX23Q9BUQ8 820 aaKnown RBP10.9□□□□□ -0.66
TRAPPC1-205ENST00000572656 TUFT1Q9NNX1 390 aa10.9□□□□□ -0.66
TRAPPC1-205ENST00000572656 DAXXQ9UER7 740 aaPredicted RBP10.9□□□□□ -0.66
TRAPPC1-205ENST00000572656 GVINP1Q7Z2Y8 2422 aa10.89□□□□□ -0.67
TRAPPC1-205ENST00000572656 ZNF292O60281 2723 aa10.89□□□□□ -0.67
TRAPPC1-205ENST00000572656 WDR87Q6ZQQ6 2873 aa10.89□□□□□ -0.67
TRAPPC1-205ENST00000572656 ACKR2O00590 384 aa10.89□□□□□ -0.67
TRAPPC1-205ENST00000572656 LRRN2O75325 713 aa10.89□□□□□ -0.67
TRAPPC1-205ENST00000572656 MED24O75448 989 aa10.89□□□□□ -0.67
TRAPPC1-205ENST00000572656 PRKCBP05771 671 aa10.89□□□□□ -0.67
TRAPPC1-205ENST00000572656 FGFR3P22607 806 aa10.89□□□□□ -0.67
TRAPPC1-205ENST00000572656 OR1D2P34982 312 aa10.89□□□□□ -0.67
TRAPPC1-205ENST00000572656 RBM25P49756 843 aaKnown RBP10.89□□□□□ -0.67
TRAPPC1-205ENST00000572656 ANAPC15P60006 121 aa10.89□□□□□ -0.67
TRAPPC1-205ENST00000572656 PRKCQQ04759 706 aa10.89□□□□□ -0.67
TRAPPC1-205ENST00000572656 MLF2Q15773 248 aaPredicted RBP10.89□□□□□ -0.67
TRAPPC1-205ENST00000572656 SLC44A4Q53GD3 710 aa10.89□□□□□ -0.67
TRAPPC1-205ENST00000572656 AXDND1Q5T1B0 1012 aaPredicted RBP10.89□□□□□ -0.67
TRAPPC1-205ENST00000572656 RTL10Q7L3V2 364 aa10.89□□□□□ -0.67
TRAPPC1-205ENST00000572656 NOSTRINQ8IVI9 506 aa10.89□□□□□ -0.67
TRAPPC1-205ENST00000572656 KIAA2013Q8IYS2 634 aa10.89□□□□□ -0.67
TRAPPC1-205ENST00000572656 MAML2Q8IZL2 1156 aaPredicted RBP10.89□□□□□ -0.67
TRAPPC1-205ENST00000572656 SLC7A14Q8TBB6 771 aa10.89□□□□□ -0.67
TRAPPC1-205ENST00000572656 BSNDQ8WZ55 320 aa10.89□□□□□ -0.67
TRAPPC1-205ENST00000572656 RUBCNQ92622 972 aa10.89□□□□□ -0.67
TRAPPC1-205ENST00000572656 GTF3C6Q969F1 213 aa10.89□□□□□ -0.67
TRAPPC1-205ENST00000572656 RMDN1Q96DB5 314 aa10.89□□□□□ -0.67
TRAPPC1-205ENST00000572656 BORCS6Q96GS4 357 aa10.89□□□□□ -0.67
TRAPPC1-205ENST00000572656 ADPGKQ9BRR6 497 aa10.89□□□□□ -0.67
TRAPPC1-205ENST00000572656 POLR3CQ9BUI4 534 aaPredicted RBP10.89□□□□□ -0.67
TRAPPC1-205ENST00000572656 BCO2Q9BYV7 579 aa10.89□□□□□ -0.67
TRAPPC1-205ENST00000572656 OSBPL6Q9BZF3 934 aa10.89□□□□□ -0.67
TRAPPC1-205ENST00000572656 CCDC113Q9H0I3 377 aa10.89□□□□□ -0.67
TRAPPC1-205ENST00000572656 CXCL16Q9H2A7 254 aa10.89□□□□□ -0.67
TRAPPC1-205ENST00000572656 TMEM60Q9H2L4 133 aa10.89□□□□□ -0.67
TRAPPC1-205ENST00000572656 MTRRQ9UBK8 725 aa10.89□□□□□ -0.67
TRAPPC1-205ENST00000572656 KCNH3Q9ULD8 1083 aa10.89□□□□□ -0.67
TRAPPC1-205ENST00000572656 POLIQ9UNA4 740 aa10.89□□□□□ -0.67
TRAPPC1-205ENST00000572656 TMEM189-UBE2V1I3L0A0 370 aa10.88□□□□□ -0.67
TRAPPC1-205ENST00000572656 CYP11B2P19099 503 aa10.88□□□□□ -0.67
TRAPPC1-205ENST00000572656 NAMPTP43490 491 aa10.88□□□□□ -0.67
TRAPPC1-205ENST00000572656 PFKPQ01813 784 aa10.88□□□□□ -0.67
TRAPPC1-205ENST00000572656 TRIM29Q14134 588 aa10.88□□□□□ -0.67
TRAPPC1-205ENST00000572656 ME3Q16798 604 aa10.88□□□□□ -0.67
TRAPPC1-205ENST00000572656 ZNF528Q3MIS6 628 aa10.88□□□□□ -0.67
TRAPPC1-205ENST00000572656 DCAF4L1Q3SXM0 396 aa10.88□□□□□ -0.67
TRAPPC1-205ENST00000572656 PABPC1LQ4VXU2 614 aaKnown RBP10.88□□□□□ -0.67
TRAPPC1-205ENST00000572656 PADI6Q6TGC4 694 aa10.88□□□□□ -0.67
TRAPPC1-205ENST00000572656 RSPO2Q6UXX9 243 aaPredicted RBP10.88□□□□□ -0.67
TRAPPC1-205ENST00000572656 NSUN7Q8NE18 718 aaKnown RBP10.88□□□□□ -0.67
TRAPPC1-205ENST00000572656 DEPTORQ8TB45 409 aa10.88□□□□□ -0.67
TRAPPC1-205ENST00000572656 HINFPQ9BQA5 517 aa10.88□□□□□ -0.67
TRAPPC1-205ENST00000572656 HCFC1R1Q9NWW0 138 aa10.88□□□□□ -0.67
TRAPPC1-205ENST00000572656 DNMT3BQ9UBC3 853 aaKnown RBP10.88□□□□□ -0.67
TRAPPC1-205ENST00000572656 FBXO4Q9UKT5 387 aa10.88□□□□□ -0.67
TRAPPC1-205ENST00000572656 USP20Q9Y2K6 914 aa10.88□□□□□ -0.67
TRAPPC1-205ENST00000572656 GDAQ9Y2T3 454 aa10.88□□□□□ -0.67
TRAPPC1-205ENST00000572656 C2orf16Q68DN1 1984 aa10.88□□□□□ -0.67
TRAPPC1-205ENST00000572656 FAM186AA6NE01 2351 aa10.87□□□□□ -0.67
TRAPPC1-205ENST00000572656 ARHGEF35A5YM69 484 aa10.87□□□□□ -0.67
TRAPPC1-205ENST00000572656 FAM170BA6NMN3 283 aa10.87□□□□□ -0.67
TRAPPC1-205ENST00000572656 LAMTOR5O43504 91 aa10.87□□□□□ -0.67
TRAPPC1-205ENST00000572656 TRAPPC3O43617 180 aa10.87□□□□□ -0.67
TRAPPC1-205ENST00000572656 KINO60870 393 aaKnown RBP10.87□□□□□ -0.67
TRAPPC1-205ENST00000572656 B3GAT3O94766 335 aa10.87□□□□□ -0.67
TRAPPC1-205ENST00000572656 LARGE1O95461 756 aa10.87□□□□□ -0.67
TRAPPC1-205ENST00000572656 EDN1P05305 212 aa10.87□□□□□ -0.67
TRAPPC1-205ENST00000572656 LIG1P18858 919 aa10.87□□□□□ -0.67
TRAPPC1-205ENST00000572656 RPA1P27694 616 aa10.87□□□□□ -0.67
TRAPPC1-205ENST00000572656 MCM7P33993 719 aa10.87□□□□□ -0.67
TRAPPC1-205ENST00000572656 MAGEA9P43362 315 aa10.87□□□□□ -0.67
TRAPPC1-205ENST00000572656 EFNA5P52803 228 aa10.87□□□□□ -0.67
TRAPPC1-205ENST00000572656 UBXN2BQ14CS0 331 aa10.87□□□□□ -0.67
TRAPPC1-205ENST00000572656 PPP2R5AQ15172 486 aa10.87□□□□□ -0.67
TRAPPC1-205ENST00000572656 EEF1DP3Q658K8 133 aa10.87□□□□□ -0.67
TRAPPC1-205ENST00000572656 DGLUCYQ7Z3D6 616 aa10.87□□□□□ -0.67
TRAPPC1-205ENST00000572656 NPAS3Q8IXF0 933 aa10.87□□□□□ -0.67
TRAPPC1-205ENST00000572656 SUMF1Q8NBK3 374 aa10.87□□□□□ -0.67
TRAPPC1-205ENST00000572656 ERMNQ8TAM6 284 aa10.87□□□□□ -0.67
TRAPPC1-205ENST00000572656 UROC1Q96N76 676 aa10.87□□□□□ -0.67
TRAPPC1-205ENST00000572656 PPP1R10Q96QC0 940 aaKnown RBP10.87□□□□□ -0.67
TRAPPC1-205ENST00000572656 KXD1Q9BQD3 176 aa10.87□□□□□ -0.67
TRAPPC1-205ENST00000572656 SPATA6Q9NWH7 488 aaPredicted RBP10.87□□□□□ -0.67
TRAPPC1-205ENST00000572656 GDE1Q9NZC3 331 aa10.87□□□□□ -0.67
TRAPPC1-205ENST00000572656 MTF2Q9Y483 593 aaPredicted RBP10.87□□□□□ -0.67
TRAPPC1-205ENST00000572656 BACE2Q9Y5Z0 518 aa10.87□□□□□ -0.67
TRAPPC1-205ENST00000572656 CDY1Q9Y6F8 540 aa10.87□□□□□ -0.67
TRAPPC1-205ENST00000572656 DCHS1Q96JQ0 3298 aa10.86□□□□□ -0.67
TRAPPC1-205ENST00000572656 SPTLC1O15269 473 aa10.86□□□□□ -0.67
TRAPPC1-205ENST00000572656 JAK2O60674 1132 aa10.86□□□□□ -0.67
TRAPPC1-205ENST00000572656 ECI2O75521 394 aa10.86□□□□□ -0.67
TRAPPC1-205ENST00000572656 MUTP22033 750 aa10.86□□□□□ -0.67
TRAPPC1-205ENST00000572656 IGFBP6P24592 240 aaPredicted RBP10.86□□□□□ -0.67
TRAPPC1-205ENST00000572656 CLCNKBP51801 687 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms