RNA–Protein interactions for RNA: ENST00000572179.5

ITGAE-207, Transcript of integrin subunit alpha E, humanhuman

TSL 1 (best)

Gene ITGAE, Length 672 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGAE-207ENST00000572179 CCL16O15467 120 aa17.13■□□□□ 0.33
ITGAE-207ENST00000572179 HNRNPA1P09651 372 aaKnown RBP eCLIP17.13■□□□□ 0.33
ITGAE-207ENST00000572179 GLULP15104 373 aa17.13■□□□□ 0.33
ITGAE-207ENST00000572179 IGFBP6P24592 240 aaPredicted RBP17.13■□□□□ 0.33
ITGAE-207ENST00000572179 ID4P47928 161 aa17.13■□□□□ 0.33
ITGAE-207ENST00000572179 ST3GAL1Q11201 340 aa17.13■□□□□ 0.33
ITGAE-207ENST00000572179 PRPF4BQ13523 1007 aaKnown RBP17.13■□□□□ 0.33
ITGAE-207ENST00000572179 TRIM29Q14134 588 aa17.13■□□□□ 0.33
ITGAE-207ENST00000572179 PPM1LQ5SGD2 360 aa17.13■□□□□ 0.33
ITGAE-207ENST00000572179 KCNG4Q8TDN1 519 aa17.13■□□□□ 0.33
ITGAE-207ENST00000572179 KIFC3Q9BVG8 833 aa17.13■□□□□ 0.33
ITGAE-207ENST00000572179 C2orf40Q9H1Z8 148 aa17.13■□□□□ 0.33
ITGAE-207ENST00000572179 CDH7Q9ULB5 785 aa17.13■□□□□ 0.33
ITGAE-207ENST00000572179 SIT1Q9Y3P8 196 aa17.13■□□□□ 0.33
ITGAE-207ENST00000572179 VWA8A3KMH1 1905 aa17.13■□□□□ 0.33
ITGAE-207ENST00000572179 LRRN2O75325 713 aa17.12■□□□□ 0.33
ITGAE-207ENST00000572179 GPC5P78333 572 aa17.12■□□□□ 0.33
ITGAE-207ENST00000572179 GUCY1B3Q02153 619 aa17.12■□□□□ 0.33
ITGAE-207ENST00000572179 MAPK6Q16659 721 aa17.12■□□□□ 0.33
ITGAE-207ENST00000572179 PADI6Q6TGC4 694 aa17.12■□□□□ 0.33
ITGAE-207ENST00000572179 PJA1Q8NG27 643 aa17.12■□□□□ 0.33
ITGAE-207ENST00000572179 ITFG1Q8TB96 612 aa17.12■□□□□ 0.33
ITGAE-207ENST00000572179 SLC7A14Q8TBB6 771 aa17.12■□□□□ 0.33
ITGAE-207ENST00000572179 NACC1Q96RE7 527 aa17.12■□□□□ 0.33
ITGAE-207ENST00000572179 ADPGKQ9BRR6 497 aa17.12■□□□□ 0.33
ITGAE-207ENST00000572179 POLR3CQ9BUI4 534 aaPredicted RBP17.12■□□□□ 0.33
ITGAE-207ENST00000572179 POLIQ9UNA4 740 aa17.12■□□□□ 0.33
ITGAE-207ENST00000572179 GDAQ9Y2T3 454 aa17.12■□□□□ 0.33
ITGAE-207ENST00000572179 ZFP37Q9Y6Q3 630 aaPredicted RBP17.12■□□□□ 0.33
ITGAE-207ENST00000572179 MYH15Q9Y2K3 1946 aa17.11■□□□□ 0.33
ITGAE-207ENST00000572179 EP300Q09472 2414 aaPredicted RBP17.11■□□□□ 0.33
ITGAE-207ENST00000572179 ARHGEF35A5YM69 484 aa17.11■□□□□ 0.33
ITGAE-207ENST00000572179 ACKR2O00590 384 aa17.11■□□□□ 0.33
ITGAE-207ENST00000572179 LMNAP02545 664 aaKnown RBP17.11■□□□□ 0.33
ITGAE-207ENST00000572179 SP9P0CG40 484 aa17.11■□□□□ 0.33
ITGAE-207ENST00000572179 HOXA9P31269 272 aa17.11■□□□□ 0.33
ITGAE-207ENST00000572179 NAMPTP43490 491 aa17.11■□□□□ 0.33
ITGAE-207ENST00000572179 ELAVL2Q12926 359 aaKnown RBP17.11■□□□□ 0.33
ITGAE-207ENST00000572179 GLRA4Q5JXX5 417 aa17.11■□□□□ 0.33
ITGAE-207ENST00000572179 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.11■□□□□ 0.33
ITGAE-207ENST00000572179 DEPTORQ8TB45 409 aa17.11■□□□□ 0.33
ITGAE-207ENST00000572179 FGF13Q92913 245 aa17.11■□□□□ 0.33
ITGAE-207ENST00000572179 POLD4Q9HCU8 107 aa17.11■□□□□ 0.33
ITGAE-207ENST00000572179 HCFC1R1Q9NWW0 138 aa17.11■□□□□ 0.33
ITGAE-207ENST00000572179 XYLBO75191 536 aa17.1■□□□□ 0.33
ITGAE-207ENST00000572179 CYP11B2P19099 503 aa17.1■□□□□ 0.33
ITGAE-207ENST00000572179 OR1D2P34982 312 aa17.1■□□□□ 0.33
ITGAE-207ENST00000572179 STARD6P59095 220 aa17.1■□□□□ 0.33
ITGAE-207ENST00000572179 ERMP1Q7Z2K6 904 aa17.1■□□□□ 0.33
ITGAE-207ENST00000572179 C1orf210Q8IVY1 113 aa17.1■□□□□ 0.33
ITGAE-207ENST00000572179 SEMA4AQ9H3S1 761 aa17.1■□□□□ 0.33
ITGAE-207ENST00000572179 MTRRQ9UBK8 725 aa17.1■□□□□ 0.33
ITGAE-207ENST00000572179 OR52Z1P0C646 297 aa17.09■□□□□ 0.33
ITGAE-207ENST00000572179 FGFR3P22607 806 aa17.09■□□□□ 0.33
ITGAE-207ENST00000572179 RPA1P27694 616 aa17.09■□□□□ 0.33
ITGAE-207ENST00000572179 SNW1Q13573 536 aaKnown RBP17.09■□□□□ 0.33
ITGAE-207ENST00000572179 RAB33AQ14088 237 aa17.09■□□□□ 0.33
ITGAE-207ENST00000572179 ZNF174Q15697 407 aa17.09■□□□□ 0.33
ITGAE-207ENST00000572179 DCAF4L1Q3SXM0 396 aa17.09■□□□□ 0.33
ITGAE-207ENST00000572179 AXDND1Q5T1B0 1012 aaPredicted RBP17.09■□□□□ 0.33
ITGAE-207ENST00000572179 PDXDC1Q6P996 788 aa17.09■□□□□ 0.33
ITGAE-207ENST00000572179 CD300LGQ6UXG3 332 aa17.09■□□□□ 0.33
ITGAE-207ENST00000572179 RSPO2Q6UXX9 243 aaPredicted RBP17.09■□□□□ 0.33
ITGAE-207ENST00000572179 MTSS1LQ765P7 747 aa17.09■□□□□ 0.33
ITGAE-207ENST00000572179 NPAS3Q8IXF0 933 aa17.09■□□□□ 0.33
ITGAE-207ENST00000572179 PPP1R10Q96QC0 940 aaKnown RBP17.09■□□□□ 0.33
ITGAE-207ENST00000572179 KXD1Q9BQD3 176 aa17.09■□□□□ 0.33
ITGAE-207ENST00000572179 GOLGA2P5Q9HBQ8 144 aa17.09■□□□□ 0.33
ITGAE-207ENST00000572179 DNMT3BQ9UBC3 853 aaKnown RBP17.09■□□□□ 0.33
ITGAE-207ENST00000572179 TMEM189-UBE2V1I3L0A0 370 aa17.08■□□□□ 0.32
ITGAE-207ENST00000572179 I3L4J1 428 aa17.08■□□□□ 0.32
ITGAE-207ENST00000572179 B3GAT3O94766 335 aa17.08■□□□□ 0.32
ITGAE-207ENST00000572179 POU2F2P09086 479 aa17.08■□□□□ 0.32
ITGAE-207ENST00000572179 TKTP29401 623 aaKnown RBP17.08■□□□□ 0.32
ITGAE-207ENST00000572179 CLCNKBP51801 687 aa17.08■□□□□ 0.32
ITGAE-207ENST00000572179 MLF2Q15773 248 aaPredicted RBP17.08■□□□□ 0.32
ITGAE-207ENST00000572179 ECM1Q16610 540 aa17.08■□□□□ 0.32
ITGAE-207ENST00000572179 PABPC1LQ4VXU2 614 aaKnown RBP17.08■□□□□ 0.32
ITGAE-207ENST00000572179 NT5DC1Q5TFE4 455 aa17.08■□□□□ 0.32
ITGAE-207ENST00000572179 MAML2Q8IZL2 1156 aaPredicted RBP17.08■□□□□ 0.32
ITGAE-207ENST00000572179 C3orf58Q8NDZ4 430 aa17.08■□□□□ 0.32
ITGAE-207ENST00000572179 ERMNQ8TAM6 284 aa17.08■□□□□ 0.32
ITGAE-207ENST00000572179 ING5Q8WYH8 240 aa17.08■□□□□ 0.32
ITGAE-207ENST00000572179 DDX27Q96GQ7 796 aaKnown RBP17.08■□□□□ 0.32
ITGAE-207ENST00000572179 CDY1Q9Y6F8 540 aa17.08■□□□□ 0.32
ITGAE-207ENST00000572179 NOTCH4Q99466 2003 aa17.08■□□□□ 0.32
ITGAE-207ENST00000572179 ZNF292O60281 2723 aa17.07■□□□□ 0.32
ITGAE-207ENST00000572179 DMXL1Q9Y485 3027 aa17.07■□□□□ 0.32
ITGAE-207ENST00000572179 KANSL1LA0AUZ9 987 aa17.07■□□□□ 0.32
ITGAE-207ENST00000572179 BRCC3P46736 316 aa17.07■□□□□ 0.32
ITGAE-207ENST00000572179 RBM25P49756 843 aaKnown RBP17.07■□□□□ 0.32
ITGAE-207ENST00000572179 NEK4P51957 841 aa17.07■□□□□ 0.32
ITGAE-207ENST00000572179 PPP2R5AQ15172 486 aa17.07■□□□□ 0.32
ITGAE-207ENST00000572179 SAFBQ15424 915 aaKnown RBP eCLIP17.07■□□□□ 0.32
ITGAE-207ENST00000572179 ATF7IP2Q5U623 682 aa17.07■□□□□ 0.32
ITGAE-207ENST00000572179 ZC3H14Q6PJT7 736 aaKnown RBP17.07■□□□□ 0.32
ITGAE-207ENST00000572179 KIAA2013Q8IYS2 634 aa17.07■□□□□ 0.32
ITGAE-207ENST00000572179 CEP120Q8N960 986 aa17.07■□□□□ 0.32
ITGAE-207ENST00000572179 RMDN1Q96DB5 314 aa17.07■□□□□ 0.32
ITGAE-207ENST00000572179 SHDQ96IW2 340 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms