RNA–Protein interactions for RNA: ENST00000571714.5

NPLOC4-206, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 676 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-206ENST00000571714 PPM1LQ5SGD2 360 aa12.32□□□□□ -0.44
NPLOC4-206ENST00000571714 LIN9Q5TKA1 542 aa12.32□□□□□ -0.44
NPLOC4-206ENST00000571714 ZC3H14Q6PJT7 736 aaKnown RBP12.32□□□□□ -0.44
NPLOC4-206ENST00000571714 POTEHQ6S545 545 aa12.32□□□□□ -0.44
NPLOC4-206ENST00000571714 RSPO2Q6UXX9 243 aaPredicted RBP12.32□□□□□ -0.44
NPLOC4-206ENST00000571714 MAEAQ7L5Y9 396 aa12.32□□□□□ -0.44
NPLOC4-206ENST00000571714 CEP57Q86XR8 500 aa12.32□□□□□ -0.44
NPLOC4-206ENST00000571714 MTMR9Q96QG7 549 aa12.32□□□□□ -0.44
NPLOC4-206ENST00000571714 PRMT7Q9NVM4 692 aaPredicted RBP12.32□□□□□ -0.44
NPLOC4-206ENST00000571714 HCFC1R1Q9NWW0 138 aa12.32□□□□□ -0.44
NPLOC4-206ENST00000571714 SNTG2Q9NY99 539 aa12.32□□□□□ -0.44
NPLOC4-206ENST00000571714 ORC3Q9UBD5 711 aaPredicted RBP12.32□□□□□ -0.44
NPLOC4-206ENST00000571714 MIA3Q5JRA6 1907 aa12.31□□□□□ -0.44
NPLOC4-206ENST00000571714 BTBD18B2RXH4 712 aa12.31□□□□□ -0.44
NPLOC4-206ENST00000571714 LARGE1O95461 756 aa12.31□□□□□ -0.44
NPLOC4-206ENST00000571714 POU2F2P09086 479 aa12.31□□□□□ -0.44
NPLOC4-206ENST00000571714 MLF2Q15773 248 aaPredicted RBP12.31□□□□□ -0.44
NPLOC4-206ENST00000571714 FAM187BQ17R55 369 aa12.31□□□□□ -0.44
NPLOC4-206ENST00000571714 EEF1DP3Q658K8 133 aa12.31□□□□□ -0.44
NPLOC4-206ENST00000571714 CD300LGQ6UXG3 332 aa12.31□□□□□ -0.44
NPLOC4-206ENST00000571714 DGLUCYQ7Z3D6 616 aa12.31□□□□□ -0.44
NPLOC4-206ENST00000571714 NOSTRINQ8IVI9 506 aa12.31□□□□□ -0.44
NPLOC4-206ENST00000571714 NPAS3Q8IXF0 933 aa12.31□□□□□ -0.44
NPLOC4-206ENST00000571714 SLC7A14Q8TBB6 771 aa12.31□□□□□ -0.44
NPLOC4-206ENST00000571714 RUBCNQ92622 972 aa12.31□□□□□ -0.44
NPLOC4-206ENST00000571714 CCDC43Q96MW1 224 aaKnown RBP12.31□□□□□ -0.44
NPLOC4-206ENST00000571714 KXD1Q9BQD3 176 aa12.31□□□□□ -0.44
NPLOC4-206ENST00000571714 CCDC113Q9H0I3 377 aa12.31□□□□□ -0.44
NPLOC4-206ENST00000571714 TMEM60Q9H2L4 133 aa12.31□□□□□ -0.44
NPLOC4-206ENST00000571714 DLL3Q9NYJ7 618 aa12.31□□□□□ -0.44
NPLOC4-206ENST00000571714 DNMT3BQ9UBC3 853 aaKnown RBP12.31□□□□□ -0.44
NPLOC4-206ENST00000571714 POLIQ9UNA4 740 aa12.31□□□□□ -0.44
NPLOC4-206ENST00000571714 DOCK6Q96HP0 2047 aa12.31□□□□□ -0.44
NPLOC4-206ENST00000571714 NOTCH4Q99466 2003 aa12.31□□□□□ -0.44
NPLOC4-206ENST00000571714 COL4A2P08572 1712 aa12.31□□□□□ -0.44
NPLOC4-206ENST00000571714 OTOGLQ3ZCN5 2332 aa12.31□□□□□ -0.44
NPLOC4-206ENST00000571714 EP300Q09472 2414 aaPredicted RBP12.3□□□□□ -0.44
NPLOC4-206ENST00000571714 SHISA7A6NL88 538 aa12.3□□□□□ -0.44
NPLOC4-206ENST00000571714 NEMFO60524 1076 aa12.3□□□□□ -0.44
NPLOC4-206ENST00000571714 MED24O75448 989 aa12.3□□□□□ -0.44
NPLOC4-206ENST00000571714 THP07101 528 aa12.3□□□□□ -0.44
NPLOC4-206ENST00000571714 XRCC6P12956 609 aaKnown RBP eCLIP12.3□□□□□ -0.44
NPLOC4-206ENST00000571714 CD72P21854 359 aa12.3□□□□□ -0.44
NPLOC4-206ENST00000571714 FGFR3P22607 806 aa12.3□□□□□ -0.44
NPLOC4-206ENST00000571714 PRKCQQ04759 706 aa12.3□□□□□ -0.44
NPLOC4-206ENST00000571714 RAB33AQ14088 237 aa12.3□□□□□ -0.44
NPLOC4-206ENST00000571714 SLC5A9Q2M3M2 681 aa12.3□□□□□ -0.44
NPLOC4-206ENST00000571714 SLC44A4Q53GD3 710 aa12.3□□□□□ -0.44
NPLOC4-206ENST00000571714 AXDND1Q5T1B0 1012 aaPredicted RBP12.3□□□□□ -0.44
NPLOC4-206ENST00000571714 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.3□□□□□ -0.44
NPLOC4-206ENST00000571714 MTSS1LQ765P7 747 aa12.3□□□□□ -0.44
NPLOC4-206ENST00000571714 CATSPER3Q86XQ3 398 aa12.3□□□□□ -0.44
NPLOC4-206ENST00000571714 C3orf58Q8NDZ4 430 aa12.3□□□□□ -0.44
NPLOC4-206ENST00000571714 SHDQ96IW2 340 aa12.3□□□□□ -0.44
NPLOC4-206ENST00000571714 HINFPQ9BQA5 517 aa12.3□□□□□ -0.44
NPLOC4-206ENST00000571714 LTB4R2Q9NPC1 389 aa12.3□□□□□ -0.44
NPLOC4-206ENST00000571714 MTRRQ9UBK8 725 aa12.3□□□□□ -0.44
NPLOC4-206ENST00000571714 TMEM189-UBE2V1I3L0A0 370 aa12.29□□□□□ -0.44
NPLOC4-206ENST00000571714 N4BP3O15049 544 aa12.29□□□□□ -0.44
NPLOC4-206ENST00000571714 OR1D2P34982 312 aa12.29□□□□□ -0.44
NPLOC4-206ENST00000571714 CLCNKBP51801 687 aa12.29□□□□□ -0.44
NPLOC4-206ENST00000571714 PRPF4BQ13523 1007 aaKnown RBP12.29□□□□□ -0.44
NPLOC4-206ENST00000571714 UBXN2BQ14CS0 331 aa12.29□□□□□ -0.44
NPLOC4-206ENST00000571714 ME3Q16798 604 aa12.29□□□□□ -0.44
NPLOC4-206ENST00000571714 ZNF528Q3MIS6 628 aa12.29□□□□□ -0.44
NPLOC4-206ENST00000571714 PABPC1LQ4VXU2 614 aaKnown RBP12.29□□□□□ -0.44
NPLOC4-206ENST00000571714 GLRA4Q5JXX5 417 aa12.29□□□□□ -0.44
NPLOC4-206ENST00000571714 ZBTB8OSQ8IWT0 167 aa12.29□□□□□ -0.44
NPLOC4-206ENST00000571714 DIS3L2Q8IYB7 885 aaKnown RBP12.29□□□□□ -0.44
NPLOC4-206ENST00000571714 NECAB1Q8N987 351 aa12.29□□□□□ -0.44
NPLOC4-206ENST00000571714 MCPH1Q8NEM0 835 aa12.29□□□□□ -0.44
NPLOC4-206ENST00000571714 ING5Q8WYH8 240 aa12.29□□□□□ -0.44
NPLOC4-206ENST00000571714 WASF1Q92558 559 aa12.29□□□□□ -0.44
NPLOC4-206ENST00000571714 DDX27Q96GQ7 796 aaKnown RBP12.29□□□□□ -0.44
NPLOC4-206ENST00000571714 PPP1R10Q96QC0 940 aaKnown RBP12.29□□□□□ -0.44
NPLOC4-206ENST00000571714 KIFC3Q9BVG8 833 aa12.29□□□□□ -0.44
NPLOC4-206ENST00000571714 OSBPL6Q9BZF3 934 aa12.29□□□□□ -0.44
NPLOC4-206ENST00000571714 SPATA6Q9NWH7 488 aaPredicted RBP12.29□□□□□ -0.44
NPLOC4-206ENST00000571714 FBXO4Q9UKT5 387 aa12.29□□□□□ -0.44
NPLOC4-206ENST00000571714 CDY1Q9Y6F8 540 aa12.29□□□□□ -0.44
NPLOC4-206ENST00000571714 I3L4J1 428 aa12.28□□□□□ -0.44
NPLOC4-206ENST00000571714 ACKR2O00590 384 aa12.28□□□□□ -0.44
NPLOC4-206ENST00000571714 KINO60870 393 aaKnown RBP12.28□□□□□ -0.44
NPLOC4-206ENST00000571714 XYLBO75191 536 aa12.28□□□□□ -0.44
NPLOC4-206ENST00000571714 PRKCBP05771 671 aa12.28□□□□□ -0.44
NPLOC4-206ENST00000571714 ATP2B1P20020 1258 aa12.28□□□□□ -0.44
NPLOC4-206ENST00000571714 TARSP26639 723 aaKnown RBP12.28□□□□□ -0.44
NPLOC4-206ENST00000571714 TKTP29401 623 aaKnown RBP12.28□□□□□ -0.44
NPLOC4-206ENST00000571714 FOSBP53539 338 aa12.28□□□□□ -0.44
NPLOC4-206ENST00000571714 ST3GAL1Q11201 340 aa12.28□□□□□ -0.44
NPLOC4-206ENST00000571714 ELAVL2Q12926 359 aaKnown RBP12.28□□□□□ -0.44
NPLOC4-206ENST00000571714 FZD5Q13467 585 aa12.28□□□□□ -0.44
NPLOC4-206ENST00000571714 PUM1Q14671 1186 aaKnown RBP eCLIP12.28□□□□□ -0.44
NPLOC4-206ENST00000571714 UVSSAQ2YD98 709 aa12.28□□□□□ -0.44
NPLOC4-206ENST00000571714 PDXDC1Q6P996 788 aa12.28□□□□□ -0.44
NPLOC4-206ENST00000571714 ZBTB44Q8NCP5 570 aa12.28□□□□□ -0.44
NPLOC4-206ENST00000571714 NSUN7Q8NE18 718 aaKnown RBP12.28□□□□□ -0.44
NPLOC4-206ENST00000571714 NELL1Q92832 810 aa12.28□□□□□ -0.44
NPLOC4-206ENST00000571714 GTF3C6Q969F1 213 aa12.28□□□□□ -0.44
NPLOC4-206ENST00000571714 BCO2Q9BYV7 579 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms