RNA–Protein interactions for RNA: ENST00000570902.1

SCARF1-204, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 1,060 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-204ENST00000570902 FAM205CA6NFA0 338 aa20.99■□□□□ 0.95
SCARF1-204ENST00000570902 POTEMA6NI47 508 aa20.99■□□□□ 0.95
SCARF1-204ENST00000570902 CCL16O15467 120 aa20.99■□□□□ 0.95
SCARF1-204ENST00000570902 MAGEA9P43362 315 aa20.99■□□□□ 0.95
SCARF1-204ENST00000570902 NTHL1P78549 312 aa20.99■□□□□ 0.95
SCARF1-204ENST00000570902 NR5A1Q13285 461 aa20.99■□□□□ 0.95
SCARF1-204ENST00000570902 TMEM132AQ24JP5 1023 aa20.99■□□□□ 0.95
SCARF1-204ENST00000570902 UVSSAQ2YD98 709 aa20.99■□□□□ 0.95
SCARF1-204ENST00000570902 SLC44A4Q53GD3 710 aa20.99■□□□□ 0.95
SCARF1-204ENST00000570902 CDCA2Q69YH5 1023 aaPredicted RBP20.99■□□□□ 0.95
SCARF1-204ENST00000570902 RTL10Q7L3V2 364 aa20.99■□□□□ 0.95
SCARF1-204ENST00000570902 C2orf40Q9H1Z8 148 aa20.99■□□□□ 0.95
SCARF1-204ENST00000570902 FZD8Q9H461 694 aa20.99■□□□□ 0.95
SCARF1-204ENST00000570902 SPATA6Q9NWH7 488 aaPredicted RBP20.99■□□□□ 0.95
SCARF1-204ENST00000570902 DAXXQ9UER7 740 aaPredicted RBP20.99■□□□□ 0.95
SCARF1-204ENST00000570902 FANCMQ8IYD8 2048 aa20.99■□□□□ 0.95
SCARF1-204ENST00000570902 MYH15Q9Y2K3 1946 aa20.98■□□□□ 0.95
SCARF1-204ENST00000570902 FRYLO94915 3013 aa20.98■□□□□ 0.95
SCARF1-204ENST00000570902 PTGESO14684 152 aa20.98■□□□□ 0.95
SCARF1-204ENST00000570902 SPTLC1O15269 473 aa20.98■□□□□ 0.95
SCARF1-204ENST00000570902 LAMTOR5O43504 91 aa20.98■□□□□ 0.95
SCARF1-204ENST00000570902 NEMFO60524 1076 aa20.98■□□□□ 0.95
SCARF1-204ENST00000570902 LRRN2O75325 713 aa20.98■□□□□ 0.95
SCARF1-204ENST00000570902 TXKP42681 527 aa20.98■□□□□ 0.95
SCARF1-204ENST00000570902 AXDND1Q5T1B0 1012 aaPredicted RBP20.98■□□□□ 0.95
SCARF1-204ENST00000570902 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.98■□□□□ 0.95
SCARF1-204ENST00000570902 MAML2Q8IZL2 1156 aaPredicted RBP20.98■□□□□ 0.95
SCARF1-204ENST00000570902 SUMF1Q8NBK3 374 aa20.98■□□□□ 0.95
SCARF1-204ENST00000570902 SLC7A14Q8TBB6 771 aa20.98■□□□□ 0.95
SCARF1-204ENST00000570902 TNFRSF25Q93038 417 aa20.98■□□□□ 0.95
SCARF1-204ENST00000570902 ADPGKQ9BRR6 497 aa20.98■□□□□ 0.95
SCARF1-204ENST00000570902 SNTG2Q9NY99 539 aa20.98■□□□□ 0.95
SCARF1-204ENST00000570902 KCNH3Q9ULD8 1083 aa20.98■□□□□ 0.95
SCARF1-204ENST00000570902 MED19A0JLT2 244 aaPredicted RBP20.97■□□□□ 0.95
SCARF1-204ENST00000570902 RECQL4O94761 1208 aa20.97■□□□□ 0.95
SCARF1-204ENST00000570902 PRPF4BQ13523 1007 aaKnown RBP20.97■□□□□ 0.95
SCARF1-204ENST00000570902 RAB33AQ14088 237 aa20.97■□□□□ 0.95
SCARF1-204ENST00000570902 UBXN2BQ14CS0 331 aa20.97■□□□□ 0.95
SCARF1-204ENST00000570902 MAPK6Q16659 721 aa20.97■□□□□ 0.95
SCARF1-204ENST00000570902 MAEAQ7L5Y9 396 aa20.97■□□□□ 0.95
SCARF1-204ENST00000570902 ITFG1Q8TB96 612 aa20.97■□□□□ 0.95
SCARF1-204ENST00000570902 PDZD7Q9H5P4 517 aa20.97■□□□□ 0.95
SCARF1-204ENST00000570902 GPRC5CQ9NQ84 441 aa20.97■□□□□ 0.95
SCARF1-204ENST00000570902 DLL3Q9NYJ7 618 aa20.97■□□□□ 0.95
SCARF1-204ENST00000570902 TPCN1Q9ULQ1 816 aa20.97■□□□□ 0.95
SCARF1-204ENST00000570902 MIA3Q5JRA6 1907 aa20.97■□□□□ 0.95
SCARF1-204ENST00000570902 FAM170BA6NMN3 283 aa20.96■□□□□ 0.95
SCARF1-204ENST00000570902 ATP2B1P20020 1258 aa20.96■□□□□ 0.95
SCARF1-204ENST00000570902 PABPC1LQ4VXU2 614 aaKnown RBP20.96■□□□□ 0.95
SCARF1-204ENST00000570902 DCLK2Q8N568 766 aa20.96■□□□□ 0.95
SCARF1-204ENST00000570902 PCDHGA2Q9Y5H1 932 aa20.96■□□□□ 0.95
SCARF1-204ENST00000570902 ADAM12O43184 909 aa20.95■□□□□ 0.94
SCARF1-204ENST00000570902 CTDNEP1O95476 244 aa20.95■□□□□ 0.94
SCARF1-204ENST00000570902 FGFR3P22607 806 aa20.95■□□□□ 0.94
SCARF1-204ENST00000570902 OR1D2P34982 312 aa20.95■□□□□ 0.94
SCARF1-204ENST00000570902 RBM25P49756 843 aaKnown RBP20.95■□□□□ 0.94
SCARF1-204ENST00000570902 NAB2Q15742 525 aa20.95■□□□□ 0.94
SCARF1-204ENST00000570902 ZBTB41Q5SVQ8 909 aa20.95■□□□□ 0.94
SCARF1-204ENST00000570902 NPAS3Q8IXF0 933 aa20.95■□□□□ 0.94
SCARF1-204ENST00000570902 GPR161Q8N6U8 529 aaKnown RBP20.95■□□□□ 0.94
SCARF1-204ENST00000570902 ATRIPQ8WXE1 791 aa20.95■□□□□ 0.94
SCARF1-204ENST00000570902 MTMR9Q96QG7 549 aa20.95■□□□□ 0.94
SCARF1-204ENST00000570902 NELL2Q99435 816 aa20.95■□□□□ 0.94
SCARF1-204ENST00000570902 KXD1Q9BQD3 176 aa20.95■□□□□ 0.94
SCARF1-204ENST00000570902 TUFT1Q9NNX1 390 aa20.95■□□□□ 0.94
SCARF1-204ENST00000570902 LTB4R2Q9NPC1 389 aa20.95■□□□□ 0.94
SCARF1-204ENST00000570902 NCDNQ9UBB6 729 aa20.95■□□□□ 0.94
SCARF1-204ENST00000570902 OTOGLQ3ZCN5 2332 aa20.95■□□□□ 0.94
SCARF1-204ENST00000570902 A0A087WWV3 80 aa20.94■□□□□ 0.94
SCARF1-204ENST00000570902 TMEM189-UBE2V1I3L0A0 370 aa20.94■□□□□ 0.94
SCARF1-204ENST00000570902 NCAM2O15394 837 aa20.94■□□□□ 0.94
SCARF1-204ENST00000570902 ECI2O75521 394 aa20.94■□□□□ 0.94
SCARF1-204ENST00000570902 PRKCBP05771 671 aa20.94■□□□□ 0.94
SCARF1-204ENST00000570902 SDHBP21912 280 aa20.94■□□□□ 0.94
SCARF1-204ENST00000570902 ANKRD1Q15327 319 aa20.94■□□□□ 0.94
SCARF1-204ENST00000570902 VARS2Q5ST30 1063 aaKnown RBP20.94■□□□□ 0.94
SCARF1-204ENST00000570902 NOSTRINQ8IVI9 506 aa20.94■□□□□ 0.94
SCARF1-204ENST00000570902 SECISBP2LQ93073 1101 aaKnown RBP20.94■□□□□ 0.94
SCARF1-204ENST00000570902 NACC1Q96RE7 527 aa20.94■□□□□ 0.94
SCARF1-204ENST00000570902 HCFC1R1Q9NWW0 138 aa20.94■□□□□ 0.94
SCARF1-204ENST00000570902 GDE1Q9NZC3 331 aa20.94■□□□□ 0.94
SCARF1-204ENST00000570902 DNMT3BQ9UBC3 853 aaKnown RBP20.94■□□□□ 0.94
SCARF1-204ENST00000570902 MTRRQ9UBK8 725 aa20.94■□□□□ 0.94
SCARF1-204ENST00000570902 MRPS23Q9Y3D9 190 aaKnown RBP20.94■□□□□ 0.94
SCARF1-204ENST00000570902 MTF2Q9Y483 593 aaPredicted RBP20.94■□□□□ 0.94
SCARF1-204ENST00000570902 CACNA1IQ9P0X4 2223 aa20.93■□□□□ 0.94
SCARF1-204ENST00000570902 TTLL13PA6NNM8 815 aa20.93■□□□□ 0.94
SCARF1-204ENST00000570902 ACKR2O00590 384 aa20.93■□□□□ 0.94
SCARF1-204ENST00000570902 TRAPPC3O43617 180 aa20.93■□□□□ 0.94
SCARF1-204ENST00000570902 B3GAT3O94766 335 aa20.93■□□□□ 0.94
SCARF1-204ENST00000570902 SPATA31C1P0DKV0 1188 aa20.93■□□□□ 0.94
SCARF1-204ENST00000570902 FDPSP14324 419 aaKnown RBP20.93■□□□□ 0.94
SCARF1-204ENST00000570902 CSTF1Q05048 431 aaKnown RBP20.93■□□□□ 0.94
SCARF1-204ENST00000570902 DCAF4L1Q3SXM0 396 aa20.93■□□□□ 0.94
SCARF1-204ENST00000570902 CATSPER3Q86XQ3 398 aa20.93■□□□□ 0.94
SCARF1-204ENST00000570902 DEPTORQ8TB45 409 aa20.93■□□□□ 0.94
SCARF1-204ENST00000570902 UROC1Q96N76 676 aa20.93■□□□□ 0.94
SCARF1-204ENST00000570902 BACE2Q9Y5Z0 518 aa20.93■□□□□ 0.94
SCARF1-204ENST00000570902 CDY1Q9Y6F8 540 aa20.93■□□□□ 0.94
SCARF1-204ENST00000570902 DOCK6Q96HP0 2047 aa20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms