RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 TMEM240Q5SV17 173 aa3.85□□□□□ -1.79
SMG6-208ENST00000570874 FAM205BPQ63HN1 556 aa3.85□□□□□ -1.79
SMG6-208ENST00000570874 SLC6A19Q695T7 634 aa3.85□□□□□ -1.79
SMG6-208ENST00000570874 STYK1Q6J9G0 422 aa3.85□□□□□ -1.79
SMG6-208ENST00000570874 LIN54Q6MZP7 749 aa3.85□□□□□ -1.79
SMG6-208ENST00000570874 CAVIN1Q6NZI2 390 aaKnown RBP3.85□□□□□ -1.79
SMG6-208ENST00000570874 ALKBH5Q6P6C2 394 aaKnown RBP3.85□□□□□ -1.79
SMG6-208ENST00000570874 C11orf88Q6PI97 169 aa3.85□□□□□ -1.79
SMG6-208ENST00000570874 APOA5Q6Q788 366 aa3.85□□□□□ -1.79
SMG6-208ENST00000570874 PLEKHM3Q6ZWE6 761 aa3.85□□□□□ -1.79
SMG6-208ENST00000570874 INTS8Q75QN2 995 aaKnown RBP3.85□□□□□ -1.79
SMG6-208ENST00000570874 PDZD4Q76G19 769 aaPredicted RBP3.85□□□□□ -1.79
SMG6-208ENST00000570874 CHST15Q7LFX5 561 aaPredicted RBP3.85□□□□□ -1.79
SMG6-208ENST00000570874 ARMC9Q7Z3E5 817 aa3.85□□□□□ -1.79
SMG6-208ENST00000570874 TTC6Q86TZ1 520 aa3.85□□□□□ -1.79
SMG6-208ENST00000570874 CLEC10AQ8IUN9 316 aa3.85□□□□□ -1.79
SMG6-208ENST00000570874 LURAP1LQ8IV03 231 aa3.85□□□□□ -1.79
SMG6-208ENST00000570874 TMEM151BQ8IW70 566 aa3.85□□□□□ -1.79
SMG6-208ENST00000570874 UNC45BQ8IWX7 931 aa3.85□□□□□ -1.79
SMG6-208ENST00000570874 RBM12BQ8IXT5 1001 aaKnown RBP3.85□□□□□ -1.79
SMG6-208ENST00000570874 VPS52Q8N1B4 723 aa3.85□□□□□ -1.79
SMG6-208ENST00000570874 CPA6Q8N4T0 437 aa3.85□□□□□ -1.79
SMG6-208ENST00000570874 USP38Q8NB14 1042 aa3.85□□□□□ -1.79
SMG6-208ENST00000570874 RDH13Q8NBN7 331 aa3.85□□□□□ -1.79
SMG6-208ENST00000570874 TSEN2Q8NCE0 465 aaKnown RBP3.85□□□□□ -1.79
SMG6-208ENST00000570874 IPMKQ8NFU5 416 aa3.85□□□□□ -1.79
SMG6-208ENST00000570874 OR6P1Q8NGX9 317 aa3.85□□□□□ -1.79
SMG6-208ENST00000570874 ZNF296Q8WUU4 475 aaPredicted RBP3.85□□□□□ -1.79
SMG6-208ENST00000570874 C7orf43Q8WVR3 580 aa3.85□□□□□ -1.79
SMG6-208ENST00000570874 LRRC45Q96CN5 670 aa3.85□□□□□ -1.79
SMG6-208ENST00000570874 CDCA5Q96FF9 252 aa3.85□□□□□ -1.79
SMG6-208ENST00000570874 ZNF274Q96GC6 653 aaPredicted RBP3.85□□□□□ -1.79
SMG6-208ENST00000570874 EPSTI1Q96J88 318 aa3.85□□□□□ -1.79
SMG6-208ENST00000570874 CNDP1Q96KN2 507 aa3.85□□□□□ -1.79
SMG6-208ENST00000570874 LRGUKQ96M69 825 aa3.85□□□□□ -1.79
SMG6-208ENST00000570874 CEP295NLQ96MC4 621 aa3.85□□□□□ -1.79
SMG6-208ENST00000570874 TIGD1Q96MW7 591 aa3.85□□□□□ -1.79
SMG6-208ENST00000570874 PIGSQ96S52 555 aa3.85□□□□□ -1.79
SMG6-208ENST00000570874 NAP1L3Q99457 506 aaPredicted RBP3.85□□□□□ -1.79
SMG6-208ENST00000570874 SLF1Q9BQI6 1058 aa3.85□□□□□ -1.79
SMG6-208ENST00000570874 HERC2P3Q9BVR0 1158 aa3.85□□□□□ -1.79
SMG6-208ENST00000570874 TEX13BQ9BXU2 312 aa3.85□□□□□ -1.79
SMG6-208ENST00000570874 OSBPL7Q9BZF2 842 aa3.85□□□□□ -1.79
SMG6-208ENST00000570874 CRNKL1Q9BZJ0 848 aaKnown RBP3.85□□□□□ -1.79
SMG6-208ENST00000570874 KRT23Q9C075 422 aa3.85□□□□□ -1.79
SMG6-208ENST00000570874 MROH8Q9H579 483 aa3.85□□□□□ -1.79
SMG6-208ENST00000570874 RSAD1Q9HA92 442 aa3.85□□□□□ -1.79
SMG6-208ENST00000570874 XAB2Q9HCS7 855 aaKnown RBP3.85□□□□□ -1.79
SMG6-208ENST00000570874 NMRK2Q9NPI5 230 aa3.85□□□□□ -1.79
SMG6-208ENST00000570874 DDX4Q9NQI0 724 aaKnown RBP3.85□□□□□ -1.79
SMG6-208ENST00000570874 PDLIM7Q9NR12 457 aa3.85□□□□□ -1.79
SMG6-208ENST00000570874 PLSCR4Q9NRQ2 329 aa3.85□□□□□ -1.79
SMG6-208ENST00000570874 SEPT11Q9NVA2 429 aaKnown RBP3.85□□□□□ -1.79
SMG6-208ENST00000570874 MCM9Q9NXL9 1143 aa3.85□□□□□ -1.79
SMG6-208ENST00000570874 DACT1Q9NYF0 836 aa3.85□□□□□ -1.79
SMG6-208ENST00000570874 CAMSAP3Q9P1Y5 1249 aaPredicted RBP3.85□□□□□ -1.79
SMG6-208ENST00000570874 HECAQ9UBI9 543 aaPredicted RBP3.85□□□□□ -1.79
SMG6-208ENST00000570874 SEPT9Q9UHD8 586 aaPredicted RBP3.85□□□□□ -1.79
SMG6-208ENST00000570874 FKBPLQ9UIM3 349 aa3.85□□□□□ -1.79
SMG6-208ENST00000570874 GRID1Q9ULK0 1009 aa3.85□□□□□ -1.79
SMG6-208ENST00000570874 PPT2Q9UMR5 302 aa3.85□□□□□ -1.79
SMG6-208ENST00000570874 POLIQ9UNA4 740 aa3.85□□□□□ -1.79
SMG6-208ENST00000570874 ANGEL1Q9UNK9 670 aaKnown RBP3.85□□□□□ -1.79
SMG6-208ENST00000570874 C19orf53Q9UNZ5 99 aaPredicted RBP3.85□□□□□ -1.79
SMG6-208ENST00000570874 PTPN22Q9Y2R2 807 aa3.85□□□□□ -1.79
SMG6-208ENST00000570874 CAB39Q9Y376 341 aaPredicted RBP3.85□□□□□ -1.79
SMG6-208ENST00000570874 SNX8Q9Y5X2 465 aa3.85□□□□□ -1.79
SMG6-208ENST00000570874 ZFP37Q9Y6Q3 630 aaPredicted RBP3.85□□□□□ -1.79
SMG6-208ENST00000570874 GAKO14976 1311 aa3.85□□□□□ -1.79
SMG6-208ENST00000570874 FAM205AQ6ZU69 1335 aa3.85□□□□□ -1.79
SMG6-208ENST00000570874 WDR19Q8NEZ3 1342 aa3.85□□□□□ -1.79
SMG6-208ENST00000570874 ARID2Q68CP9 1835 aa3.84□□□□□ -1.79
SMG6-208ENST00000570874 LOXHD1Q8IVV2 1947 aa3.84□□□□□ -1.79
SMG6-208ENST00000570874 GPR75-ASB3A0A0A6YYF3 556 aa3.84□□□□□ -1.79
SMG6-208ENST00000570874 CCDC169A6NNP5 214 aa3.84□□□□□ -1.79
SMG6-208ENST00000570874 LACTBL1A8MY62 500 aa3.84□□□□□ -1.79
SMG6-208ENST00000570874 PI4K2BG5E9Z4 385 aa3.84□□□□□ -1.79
SMG6-208ENST00000570874 H3BRJ5 948 aa3.84□□□□□ -1.79
SMG6-208ENST00000570874 XPOTO43592 962 aaKnown RBP3.84□□□□□ -1.79
SMG6-208ENST00000570874 CEP104O60308 925 aa3.84□□□□□ -1.79
SMG6-208ENST00000570874 KINO60870 393 aaKnown RBP3.84□□□□□ -1.79
SMG6-208ENST00000570874 DDAH1O94760 285 aa3.84□□□□□ -1.79
SMG6-208ENST00000570874 SLITRK5O94991 958 aa3.84□□□□□ -1.79
SMG6-208ENST00000570874 PLEKHA8P1O95397 391 aa3.84□□□□□ -1.79
SMG6-208ENST00000570874 TBX18O95935 607 aa3.84□□□□□ -1.79
SMG6-208ENST00000570874 MBD3O95983 291 aa3.84□□□□□ -1.79
SMG6-208ENST00000570874 VEGFAP15692 232 aaPredicted RBP3.84□□□□□ -1.79
SMG6-208ENST00000570874 HSPA6P17066 643 aa3.84□□□□□ -1.79
SMG6-208ENST00000570874 CAPN2P17655 700 aa3.84□□□□□ -1.79
SMG6-208ENST00000570874 HDCP19113 662 aa3.84□□□□□ -1.79
SMG6-208ENST00000570874 MSNP26038 577 aaKnown RBP3.84□□□□□ -1.79
SMG6-208ENST00000570874 MATR3P43243 847 aaKnown RBP eCLIP3.84□□□□□ -1.79
SMG6-208ENST00000570874 RECQLP46063 649 aaPredicted RBP3.84□□□□□ -1.79
SMG6-208ENST00000570874 GIPRP48546 466 aa3.84□□□□□ -1.79
SMG6-208ENST00000570874 CENPAP49450 140 aa3.84□□□□□ -1.79
SMG6-208ENST00000570874 METAP2P50579 478 aaKnown RBP eCLIP3.84□□□□□ -1.79
SMG6-208ENST00000570874 CLCN2P51788 898 aa3.84□□□□□ -1.79
SMG6-208ENST00000570874 USP14P54578 494 aa3.84□□□□□ -1.79
SMG6-208ENST00000570874 DRG2P55039 364 aaKnown RBP3.84□□□□□ -1.79
SMG6-208ENST00000570874 IL1RL1Q01638 556 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms