RNA–Protein interactions for RNA: ENST00000570324.1

NPLOC4-204, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 3

Gene NPLOC4, Length 414 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-204ENST00000570324 KIF4AO95239 1232 aa9.8□□□□□ -0.84
NPLOC4-204ENST00000570324 BRD1O95696 1058 aa9.8□□□□□ -0.84
NPLOC4-204ENST00000570324 C1RP00736 705 aa9.8□□□□□ -0.84
NPLOC4-204ENST00000570324 EDN1P05305 212 aa9.8□□□□□ -0.84
NPLOC4-204ENST00000570324 KRT18P05783 430 aaKnown RBP9.8□□□□□ -0.84
NPLOC4-204ENST00000570324 UBA7P41226 1012 aa9.8□□□□□ -0.84
NPLOC4-204ENST00000570324 PSMD5Q16401 504 aa9.8□□□□□ -0.84
NPLOC4-204ENST00000570324 IL17AQ16552 155 aa9.8□□□□□ -0.84
NPLOC4-204ENST00000570324 GLRA4Q5JXX5 417 aa9.8□□□□□ -0.84
NPLOC4-204ENST00000570324 ARL6IP4Q66PJ3 421 aaKnown RBP9.8□□□□□ -0.84
NPLOC4-204ENST00000570324 DCLRE1AQ6PJP8 1040 aa9.8□□□□□ -0.84
NPLOC4-204ENST00000570324 ALYREFQ86V81 257 aaKnown RBP9.8□□□□□ -0.84
NPLOC4-204ENST00000570324 UROC1Q96N76 676 aa9.8□□□□□ -0.84
NPLOC4-204ENST00000570324 ACAP3Q96P50 834 aa9.8□□□□□ -0.84
NPLOC4-204ENST00000570324 ACO2Q99798 780 aaKnown RBP9.8□□□□□ -0.84
NPLOC4-204ENST00000570324 RUSC1Q9BVN2 902 aa9.8□□□□□ -0.84
NPLOC4-204ENST00000570324 TARS2Q9BW92 718 aaKnown RBP9.8□□□□□ -0.84
NPLOC4-204ENST00000570324 SLC38A7Q9NVC3 462 aa9.8□□□□□ -0.84
NPLOC4-204ENST00000570324 ZDHHC7Q9NXF8 308 aa9.8□□□□□ -0.84
NPLOC4-204ENST00000570324 FBXL21Q9UKT6 434 aa9.8□□□□□ -0.84
NPLOC4-204ENST00000570324 PLXNA3P51805 1871 aa9.79□□□□□ -0.84
NPLOC4-204ENST00000570324 VPS37CA5D8V6 355 aaPredicted RBP9.79□□□□□ -0.84
NPLOC4-204ENST00000570324 H0YCG3 227 aa9.79□□□□□ -0.84
NPLOC4-204ENST00000570324 EFEMP2O95967 443 aa9.79□□□□□ -0.84
NPLOC4-204ENST00000570324 BMP15O95972 392 aa9.79□□□□□ -0.84
NPLOC4-204ENST00000570324 PLA2G4BP0C869 781 aa9.79□□□□□ -0.84
NPLOC4-204ENST00000570324 MCF2P10911 925 aa9.79□□□□□ -0.84
NPLOC4-204ENST00000570324 GUCY2CP25092 1073 aa9.79□□□□□ -0.84
NPLOC4-204ENST00000570324 AVPR2P30518 371 aa9.79□□□□□ -0.84
NPLOC4-204ENST00000570324 GRM5P41594 1212 aa9.79□□□□□ -0.84
NPLOC4-204ENST00000570324 PTPN5P54829 565 aa9.79□□□□□ -0.84
NPLOC4-204ENST00000570324 NHLH1Q02575 133 aa9.79□□□□□ -0.84
NPLOC4-204ENST00000570324 TDGQ13569 410 aa9.79□□□□□ -0.84
NPLOC4-204ENST00000570324 DHX8Q14562 1220 aaKnown RBP9.79□□□□□ -0.84
NPLOC4-204ENST00000570324 RTP2Q5QGT7 225 aa9.79□□□□□ -0.84
NPLOC4-204ENST00000570324 PPM1LQ5SGD2 360 aa9.79□□□□□ -0.84
NPLOC4-204ENST00000570324 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.79□□□□□ -0.84
NPLOC4-204ENST00000570324 C1orf186Q6ZWK4 172 aa9.79□□□□□ -0.84
NPLOC4-204ENST00000570324 SYT2Q8N9I0 419 aaPredicted RBP9.79□□□□□ -0.84
NPLOC4-204ENST00000570324 PIK3R5Q8WYR1 880 aa9.79□□□□□ -0.84
NPLOC4-204ENST00000570324 ASIC4Q96FT7 647 aa9.79□□□□□ -0.84
NPLOC4-204ENST00000570324 BICD1Q96G01 975 aa9.79□□□□□ -0.84
NPLOC4-204ENST00000570324 AK8Q96MA6 479 aa9.79□□□□□ -0.84
NPLOC4-204ENST00000570324 PRKD2Q9BZL6 878 aa9.79□□□□□ -0.84
NPLOC4-204ENST00000570324 IRF2BPLQ9H1B7 796 aa9.79□□□□□ -0.84
NPLOC4-204ENST00000570324 CDT1Q9H211 546 aa9.79□□□□□ -0.84
NPLOC4-204ENST00000570324 WDR6Q9NNW5 1121 aaKnown RBP9.79□□□□□ -0.84
NPLOC4-204ENST00000570324 KCND2Q9NZV8 630 aa9.79□□□□□ -0.84
NPLOC4-204ENST00000570324 IGSF9Q9P2J2 1179 aa9.79□□□□□ -0.84
NPLOC4-204ENST00000570324 LARSQ9P2J5 1176 aaKnown RBP9.79□□□□□ -0.84
NPLOC4-204ENST00000570324 POLIQ9UNA4 740 aa9.79□□□□□ -0.84
NPLOC4-204ENST00000570324 NUB1Q9Y5A7 615 aa9.79□□□□□ -0.84
NPLOC4-204ENST00000570324 CLUHO75153 1309 aa9.79□□□□□ -0.84
NPLOC4-204ENST00000570324 TECTAO75443 2155 aa9.78□□□□□ -0.84
NPLOC4-204ENST00000570324 SMIM28A0A1B0GU29 152 aa9.78□□□□□ -0.84
NPLOC4-204ENST00000570324 STK25O00506 426 aa9.78□□□□□ -0.84
NPLOC4-204ENST00000570324 CLDN3O15551 220 aa9.78□□□□□ -0.84
NPLOC4-204ENST00000570324 SLC26A4O43511 780 aa9.78□□□□□ -0.84
NPLOC4-204ENST00000570324 ZMYND10O75800 440 aa9.78□□□□□ -0.84
NPLOC4-204ENST00000570324 FAM13AO94988 1023 aa9.78□□□□□ -0.84
NPLOC4-204ENST00000570324 CD2BP2O95400 341 aaKnown RBP9.78□□□□□ -0.84
NPLOC4-204ENST00000570324 PLS3P13797 630 aa9.78□□□□□ -0.84
NPLOC4-204ENST00000570324 PDCP20941 246 aa9.78□□□□□ -0.84
NPLOC4-204ENST00000570324 RFX1P22670 979 aa9.78□□□□□ -0.84
NPLOC4-204ENST00000570324 HOXD11P31277 338 aaPredicted RBP9.78□□□□□ -0.84
NPLOC4-204ENST00000570324 OR1D2P34982 312 aa9.78□□□□□ -0.84
NPLOC4-204ENST00000570324 CLCNKBP51801 687 aa9.78□□□□□ -0.84
NPLOC4-204ENST00000570324 LILRA6Q6PI73 481 aa9.78□□□□□ -0.84
NPLOC4-204ENST00000570324 MPZL3Q6UWV2 235 aa9.78□□□□□ -0.84
NPLOC4-204ENST00000570324 GET4Q7L5D6 327 aaPredicted RBP9.78□□□□□ -0.84
NPLOC4-204ENST00000570324 KCNK18Q7Z418 384 aa9.78□□□□□ -0.84
NPLOC4-204ENST00000570324 BRAPQ7Z569 592 aa9.78□□□□□ -0.84
NPLOC4-204ENST00000570324 DAW1Q8N136 415 aa9.78□□□□□ -0.84
NPLOC4-204ENST00000570324 CEP120Q8N960 986 aa9.78□□□□□ -0.84
NPLOC4-204ENST00000570324 LNX1Q8TBB1 728 aaPredicted RBP9.78□□□□□ -0.84
NPLOC4-204ENST00000570324 SPIRE2Q8WWL2 714 aa9.78□□□□□ -0.84
NPLOC4-204ENST00000570324 DDX27Q96GQ7 796 aaKnown RBP9.78□□□□□ -0.84
NPLOC4-204ENST00000570324 TBC1D32Q96NH3 1257 aa9.78□□□□□ -0.84
NPLOC4-204ENST00000570324 PNMA5Q96PV4 448 aa9.78□□□□□ -0.84
NPLOC4-204ENST00000570324 PPP1R10Q96QC0 940 aaKnown RBP9.78□□□□□ -0.84
NPLOC4-204ENST00000570324 MMTAG2Q9BU76 263 aaKnown RBP9.78□□□□□ -0.84
NPLOC4-204ENST00000570324 RHOBTB2Q9BYZ6 727 aa9.78□□□□□ -0.84
NPLOC4-204ENST00000570324 CXCL16Q9H2A7 254 aa9.78□□□□□ -0.84
NPLOC4-204ENST00000570324 ZHX3Q9H4I2 956 aa9.78□□□□□ -0.84
NPLOC4-204ENST00000570324 KCNK12Q9HB15 430 aa9.78□□□□□ -0.84
NPLOC4-204ENST00000570324 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.78□□□□□ -0.84
NPLOC4-204ENST00000570324 ARHGAP28Q9P2N2 729 aa9.78□□□□□ -0.84
NPLOC4-204ENST00000570324 ANKFY1Q9P2R3 1169 aa9.78□□□□□ -0.84
NPLOC4-204ENST00000570324 MYO10Q9HD67 2058 aa9.78□□□□□ -0.84
NPLOC4-204ENST00000570324 C2orf16Q68DN1 1984 aa9.77□□□□□ -0.84
NPLOC4-204ENST00000570324 TMEM189-UBE2V1I3L0A0 370 aa9.77□□□□□ -0.85
NPLOC4-204ENST00000570324 XYLBO75191 536 aa9.77□□□□□ -0.85
NPLOC4-204ENST00000570324 TOM1L1O75674 476 aa9.77□□□□□ -0.85
NPLOC4-204ENST00000570324 PDGFBP01127 241 aaPredicted RBP9.77□□□□□ -0.85
NPLOC4-204ENST00000570324 C8AP07357 584 aa9.77□□□□□ -0.85
NPLOC4-204ENST00000570324 HNRNPA1P09651 372 aaKnown RBP eCLIP9.77□□□□□ -0.85
NPLOC4-204ENST00000570324 ELF1P32519 619 aa9.77□□□□□ -0.85
NPLOC4-204ENST00000570324 VCPP55072 806 aaKnown RBP9.77□□□□□ -0.85
NPLOC4-204ENST00000570324 CACNB1Q02641 598 aaPredicted RBP9.77□□□□□ -0.85
NPLOC4-204ENST00000570324 NAB2Q15742 525 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms