RNA–Protein interactions for RNA: ENST00000570150.1

PKD1-238, Transcript of polycystin 1, transient receptor potential channel interacting, human

TSL 5

Gene PKD1, Length 571 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PKD1-238	ENST00000570150	CUL9	Q8IWT3	2517 aa		19.62	■□□□□ 0.73
PKD1-238	ENST00000570150		A0A0B4J269	797 aa		19.62	■□□□□ 0.73
PKD1-238	ENST00000570150	TTLL13P	A6NNM8	815 aa		19.62	■□□□□ 0.73
PKD1-238	ENST00000570150	TADA2A	O75478	443 aa		19.62	■□□□□ 0.73
PKD1-238	ENST00000570150	PPP1R37	O75864	691 aa		19.62	■□□□□ 0.73
PKD1-238	ENST00000570150	DDHD2	O94830	711 aa		19.62	■□□□□ 0.73
PKD1-238	ENST00000570150	UROD	P06132	367 aa		19.62	■□□□□ 0.73
PKD1-238	ENST00000570150	CTSA	P10619	480 aa		19.62	■□□□□ 0.73
PKD1-238	ENST00000570150	NMT1	P30419	496 aa	Known RBP	19.62	■□□□□ 0.73
PKD1-238	ENST00000570150	PPP2R3A	Q06190	1150 aa		19.62	■□□□□ 0.73
PKD1-238	ENST00000570150	KIAA1841	Q6NSI8	718 aa		19.62	■□□□□ 0.73
PKD1-238	ENST00000570150	EFHB	Q8N7U6	833 aa		19.62	■□□□□ 0.73
PKD1-238	ENST00000570150	MRPL43	Q8N983	215 aa	Known RBP	19.62	■□□□□ 0.73
PKD1-238	ENST00000570150	GSTCD	Q8NEC7	633 aa		19.62	■□□□□ 0.73
PKD1-238	ENST00000570150	STRA6	Q9BX79	667 aa		19.62	■□□□□ 0.73
PKD1-238	ENST00000570150	RPF1	Q9H9Y2	349 aa	Known RBP	19.62	■□□□□ 0.73
PKD1-238	ENST00000570150	KIAA1586	Q9HCI6	787 aa		19.62	■□□□□ 0.73
PKD1-238	ENST00000570150	CHMP5	Q9NZZ3	219 aa		19.62	■□□□□ 0.73
PKD1-238	ENST00000570150	KLK14	Q9P0G3	267 aa		19.62	■□□□□ 0.73
PKD1-238	ENST00000570150	DNAJB4	Q9UDY4	337 aa		19.62	■□□□□ 0.73
PKD1-238	ENST00000570150	ADAM28	Q9UKQ2	775 aa		19.62	■□□□□ 0.73
PKD1-238	ENST00000570150	DERA	Q9Y315	318 aa		19.62	■□□□□ 0.73
PKD1-238	ENST00000570150	NLRC5	Q86WI3	1866 aa		19.62	■□□□□ 0.73
PKD1-238	ENST00000570150	TMEM189-UBE2V1	I3L0A0	370 aa		19.61	■□□□□ 0.73
PKD1-238	ENST00000570150	ABLIM1	O14639	778 aa		19.61	■□□□□ 0.73
PKD1-238	ENST00000570150	SOD2	P04179	222 aa		19.61	■□□□□ 0.73
PKD1-238	ENST00000570150	GART	P22102	1010 aa		19.61	■□□□□ 0.73
PKD1-238	ENST00000570150	COASY	Q13057	564 aa		19.61	■□□□□ 0.73
PKD1-238	ENST00000570150	FAM26F	Q5R3K3	315 aa		19.61	■□□□□ 0.73
PKD1-238	ENST00000570150	DCLRE1A	Q6PJP8	1040 aa		19.61	■□□□□ 0.73
PKD1-238	ENST00000570150	ALKAL1	Q6UXT8	129 aa		19.61	■□□□□ 0.73
PKD1-238	ENST00000570150	NT5DC4	Q86YG4	428 aa		19.61	■□□□□ 0.73
PKD1-238	ENST00000570150	FSIP1	Q8NA03	581 aa		19.61	■□□□□ 0.73
PKD1-238	ENST00000570150	GOLGA5	Q8TBA6	731 aa		19.61	■□□□□ 0.73
PKD1-238	ENST00000570150	SNX27	Q96L92	541 aa		19.61	■□□□□ 0.73
PKD1-238	ENST00000570150	ASB7	Q9H672	318 aa		19.61	■□□□□ 0.73
PKD1-238	ENST00000570150	UBE2Z	Q9H832	354 aa	Predicted RBP	19.61	■□□□□ 0.73
PKD1-238	ENST00000570150	COL4A4	P53420	1690 aa	Predicted RBP	19.61	■□□□□ 0.73
PKD1-238	ENST00000570150	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	19.6	■□□□□ 0.73
PKD1-238	ENST00000570150	SMIM28	A0A1B0GU29	152 aa		19.6	■□□□□ 0.73
PKD1-238	ENST00000570150		A0A1B0GVL5	298 aa		19.6	■□□□□ 0.73
PKD1-238	ENST00000570150	ARHGEF37	A1IGU5	675 aa		19.6	■□□□□ 0.73
PKD1-238	ENST00000570150	CXCL14	O95715	111 aa		19.6	■□□□□ 0.73
PKD1-238	ENST00000570150	EDN1	P05305	212 aa		19.6	■□□□□ 0.73
PKD1-238	ENST00000570150	HOXB8	P17481	243 aa	Predicted RBP	19.6	■□□□□ 0.73
PKD1-238	ENST00000570150	CYP3A5	P20815	502 aa		19.6	■□□□□ 0.73
PKD1-238	ENST00000570150	CAMK1	Q14012	370 aa		19.6	■□□□□ 0.73
PKD1-238	ENST00000570150	USP41	Q3LFD5	358 aa		19.6	■□□□□ 0.73
PKD1-238	ENST00000570150	HS2ST1	Q7LGA3	356 aa		19.6	■□□□□ 0.73
PKD1-238	ENST00000570150	POMGNT1	Q8WZA1	660 aa		19.6	■□□□□ 0.73
PKD1-238	ENST00000570150	ASB2	Q96Q27	587 aa		19.6	■□□□□ 0.73
PKD1-238	ENST00000570150	PPP1R10	Q96QC0	940 aa	Known RBP	19.6	■□□□□ 0.73
PKD1-238	ENST00000570150	HERC2P3	Q9BVR0	1158 aa		19.6	■□□□□ 0.73
PKD1-238	ENST00000570150	ZBP1	Q9H171	429 aa		19.6	■□□□□ 0.73
PKD1-238	ENST00000570150	EXOC1	Q9NV70	894 aa		19.6	■□□□□ 0.73
PKD1-238	ENST00000570150	AGO2	Q9UKV8	859 aa	Known RBP	19.6	■□□□□ 0.73
PKD1-238	ENST00000570150	NT5C1B-RDH14	C9J2C7	533 aa		19.59	■□□□□ 0.73
PKD1-238	ENST00000570150	PTGES	O14684	152 aa		19.59	■□□□□ 0.73
PKD1-238	ENST00000570150	IL18RAP	O95256	599 aa		19.59	■□□□□ 0.73
PKD1-238	ENST00000570150	HARS	P12081	509 aa	Known RBP	19.59	■□□□□ 0.73
PKD1-238	ENST00000570150	DNAJB1	P25685	340 aa		19.59	■□□□□ 0.73
PKD1-238	ENST00000570150	PBX3	P40426	434 aa		19.59	■□□□□ 0.73
PKD1-238	ENST00000570150	OSTN	P61366	133 aa		19.59	■□□□□ 0.73
PKD1-238	ENST00000570150	CTC1	Q2NKJ3	1217 aa		19.59	■□□□□ 0.73
PKD1-238	ENST00000570150	LEXM	Q3ZCV2	418 aa		19.59	■□□□□ 0.73
PKD1-238	ENST00000570150	CASP10	Q92851	521 aa		19.59	■□□□□ 0.73
PKD1-238	ENST00000570150	PAGE5	Q96GU1	130 aa		19.59	■□□□□ 0.73
PKD1-238	ENST00000570150	CLDND1	Q9NY35	253 aa		19.59	■□□□□ 0.73
PKD1-238	ENST00000570150	HCST	Q9UBK5	93 aa		19.59	■□□□□ 0.73
PKD1-238	ENST00000570150	UBQLN1	Q9UMX0	589 aa	Known RBP	19.59	■□□□□ 0.73
PKD1-238	ENST00000570150	PRG3	Q9Y2Y8	225 aa	Predicted RBP	19.59	■□□□□ 0.73
PKD1-238	ENST00000570150	PRRC2B	Q5JSZ5	2229 aa	Known RBP	19.59	■□□□□ 0.73
PKD1-238	ENST00000570150	ACTN4	O43707	911 aa	Known RBP	19.58	■□□□□ 0.72
PKD1-238	ENST00000570150	ADH1A	P07327	375 aa		19.58	■□□□□ 0.72
PKD1-238	ENST00000570150	CA8	P35219	290 aa		19.58	■□□□□ 0.72
PKD1-238	ENST00000570150	NRIP1	P48552	1158 aa		19.58	■□□□□ 0.72
PKD1-238	ENST00000570150	GLUD2	P49448	558 aa		19.58	■□□□□ 0.72
PKD1-238	ENST00000570150	AFF1	P51825	1210 aa	Known RBP	19.58	■□□□□ 0.72
PKD1-238	ENST00000570150	ERVFC1	P60507	584 aa		19.58	■□□□□ 0.72
PKD1-238	ENST00000570150	DUSP6	Q16828	381 aa		19.58	■□□□□ 0.72
PKD1-238	ENST00000570150	ZC2HC1C	Q53FD0	456 aa	Predicted RBP	19.58	■□□□□ 0.72
PKD1-238	ENST00000570150	PLPP4	Q5VZY2	271 aa		19.58	■□□□□ 0.72
PKD1-238	ENST00000570150	TMEM184A	Q6ZMB5	413 aa		19.58	■□□□□ 0.72
PKD1-238	ENST00000570150	DZANK1	Q9NVP4	752 aa		19.58	■□□□□ 0.72
PKD1-238	ENST00000570150	MIOS	Q9NXC5	875 aa		19.58	■□□□□ 0.72
PKD1-238	ENST00000570150	SERTAD1	Q9UHV2	236 aa		19.58	■□□□□ 0.72
PKD1-238	ENST00000570150	USP20	Q9Y2K6	914 aa		19.58	■□□□□ 0.72
PKD1-238	ENST00000570150	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	19.57	■□□□□ 0.72
PKD1-238	ENST00000570150	TTC26	A0AVF1	554 aa		19.57	■□□□□ 0.72
PKD1-238	ENST00000570150	C2orf71	A6NGG8	1288 aa		19.57	■□□□□ 0.72
PKD1-238	ENST00000570150	ADRB2	P07550	413 aa		19.57	■□□□□ 0.72
PKD1-238	ENST00000570150	AFM	P43652	599 aa		19.57	■□□□□ 0.72
PKD1-238	ENST00000570150	NDUFV1	P49821	464 aa		19.57	■□□□□ 0.72
PKD1-238	ENST00000570150	NDUFA8	P51970	172 aa		19.57	■□□□□ 0.72
PKD1-238	ENST00000570150	HYAL1	Q12794	435 aa		19.57	■□□□□ 0.72
PKD1-238	ENST00000570150	ADAM15	Q13444	863 aa		19.57	■□□□□ 0.72
PKD1-238	ENST00000570150	SURF1	Q15526	300 aa		19.57	■□□□□ 0.72
PKD1-238	ENST00000570150	TPRN	Q4KMQ1	711 aa		19.57	■□□□□ 0.72
PKD1-238	ENST00000570150	FUT10	Q6P4F1	479 aa		19.57	■□□□□ 0.72
PKD1-238	ENST00000570150	ZNF507	Q8TCN5	953 aa		19.57	■□□□□ 0.72

Retrieved 100 of 20,778 RNA–protein pairs in 30 ms