RNA–Protein interactions for RNA: ENST00000570139.1

CNOT1-222, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 458 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-222ENST00000570139 BECN1Q14457 450 aa8.21□□□□□ -1.1
CNOT1-222ENST00000570139 NKPD1Q17RQ9 610 aa8.21□□□□□ -1.1
CNOT1-222ENST00000570139 CAVIN4Q5BKX8 364 aa8.21□□□□□ -1.1
CNOT1-222ENST00000570139 TOR2AQ5JU69 321 aa8.21□□□□□ -1.1
CNOT1-222ENST00000570139 TSHZ3Q63HK5 1081 aa8.21□□□□□ -1.1
CNOT1-222ENST00000570139 FSTL4Q6MZW2 842 aa8.21□□□□□ -1.1
CNOT1-222ENST00000570139 CCDC149Q6ZUS6 474 aa8.21□□□□□ -1.1
CNOT1-222ENST00000570139 ESPNLQ6ZVH7 1005 aa8.21□□□□□ -1.1
CNOT1-222ENST00000570139 TXNRD3Q86VQ6 643 aa8.21□□□□□ -1.1
CNOT1-222ENST00000570139 CXorf67Q86X51 503 aaPredicted RBP8.21□□□□□ -1.1
CNOT1-222ENST00000570139 TEX2Q8IWB9 1127 aa8.21□□□□□ -1.1
CNOT1-222ENST00000570139 GRAMD1CQ8IYS0 662 aa8.21□□□□□ -1.1
CNOT1-222ENST00000570139 TMEM151AQ8N4L1 468 aa8.21□□□□□ -1.1
CNOT1-222ENST00000570139 KBTBD3Q8NAB2 608 aa8.21□□□□□ -1.1
CNOT1-222ENST00000570139 UHMK1Q8TAS1 419 aaKnown RBP8.21□□□□□ -1.1
CNOT1-222ENST00000570139 PIP4K2CQ8TBX8 421 aa8.21□□□□□ -1.1
CNOT1-222ENST00000570139 PARD3BQ8TEW8 1205 aa8.21□□□□□ -1.1
CNOT1-222ENST00000570139 UBE2FQ969M7 185 aa8.21□□□□□ -1.1
CNOT1-222ENST00000570139 MEGF10Q96KG7 1140 aa8.21□□□□□ -1.1
CNOT1-222ENST00000570139 FSD1Q9BTV5 496 aa8.21□□□□□ -1.1
CNOT1-222ENST00000570139 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.21□□□□□ -1.1
CNOT1-222ENST00000570139 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.21□□□□□ -1.1
CNOT1-222ENST00000570139 BOLA2Q9H3K6 86 aa8.21□□□□□ -1.1
CNOT1-222ENST00000570139 CASS4Q9NQ75 786 aa8.21□□□□□ -1.1
CNOT1-222ENST00000570139 PAG1Q9NWQ8 432 aa8.21□□□□□ -1.1
CNOT1-222ENST00000570139 PNMA2Q9UL42 364 aa8.21□□□□□ -1.1
CNOT1-222ENST00000570139 COL11A2P13942 1736 aaPredicted RBP8.2□□□□□ -1.1
CNOT1-222ENST00000570139 LTBP1Q14766 1721 aa8.2□□□□□ -1.1
CNOT1-222ENST00000570139 KIAA1551Q9HCM1 1747 aa8.2□□□□□ -1.1
CNOT1-222ENST00000570139 KIF13BQ9NQT8 1826 aa8.2□□□□□ -1.1
CNOT1-222ENST00000570139 H3BML4 177 aa8.2□□□□□ -1.1
CNOT1-222ENST00000570139 SGSM2O43147 1006 aa8.2□□□□□ -1.1
CNOT1-222ENST00000570139 NDUFS2O75306 463 aa8.2□□□□□ -1.1
CNOT1-222ENST00000570139 MYL3P08590 195 aa8.2□□□□□ -1.1
CNOT1-222ENST00000570139 MMP10P09238 476 aa8.2□□□□□ -1.1
CNOT1-222ENST00000570139 NPR1P16066 1061 aa8.2□□□□□ -1.1
CNOT1-222ENST00000570139 CD53P19397 219 aa8.2□□□□□ -1.1
CNOT1-222ENST00000570139 ALDH1B1P30837 517 aa8.2□□□□□ -1.1
CNOT1-222ENST00000570139 KCNJ4P48050 445 aa8.2□□□□□ -1.1
CNOT1-222ENST00000570139 OXCT1P55809 520 aa8.2□□□□□ -1.1
CNOT1-222ENST00000570139 CORO7P57737 925 aa8.2□□□□□ -1.1
CNOT1-222ENST00000570139 MRPS9P82933 396 aaKnown RBP8.2□□□□□ -1.1
CNOT1-222ENST00000570139 KIF23Q02241 960 aaPredicted RBP8.2□□□□□ -1.1
CNOT1-222ENST00000570139 SLC9A5Q14940 896 aa8.2□□□□□ -1.1
CNOT1-222ENST00000570139 UGT8Q16880 541 aa8.2□□□□□ -1.1
CNOT1-222ENST00000570139 LONRF1Q17RB8 773 aa8.2□□□□□ -1.1
CNOT1-222ENST00000570139 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.2□□□□□ -1.1
CNOT1-222ENST00000570139 UAP1L1Q3KQV9 507 aa8.2□□□□□ -1.1
CNOT1-222ENST00000570139 SPTY2D1Q68D10 685 aaPredicted RBP8.2□□□□□ -1.1
CNOT1-222ENST00000570139 CYP4F22Q6NT55 531 aa8.2□□□□□ -1.1
CNOT1-222ENST00000570139 USP45Q70EL2 814 aa8.2□□□□□ -1.1
CNOT1-222ENST00000570139 SMIM5Q71RC9 77 aa8.2□□□□□ -1.1
CNOT1-222ENST00000570139 ZNF765Q7L2R6 523 aa8.2□□□□□ -1.1
CNOT1-222ENST00000570139 DENND1CQ8IV53 801 aa8.2□□□□□ -1.1
CNOT1-222ENST00000570139 SPACA3Q8IXA5 215 aa8.2□□□□□ -1.1
CNOT1-222ENST00000570139 CPXCR1Q8N123 301 aa8.2□□□□□ -1.1
CNOT1-222ENST00000570139 SH3RF2Q8TEC5 729 aa8.2□□□□□ -1.1
CNOT1-222ENST00000570139 MVB12AQ96EY5 273 aa8.2□□□□□ -1.1
CNOT1-222ENST00000570139 MAML3Q96JK9 1138 aa8.2□□□□□ -1.1
CNOT1-222ENST00000570139 C16orf92Q96LL3 132 aa8.2□□□□□ -1.1
CNOT1-222ENST00000570139 HSPA12BQ96MM6 686 aa8.2□□□□□ -1.1
CNOT1-222ENST00000570139 QRSL1Q9H0R6 528 aaKnown RBP8.2□□□□□ -1.1
CNOT1-222ENST00000570139 TMX4Q9H1E5 349 aaPredicted RBP8.2□□□□□ -1.1
CNOT1-222ENST00000570139 TMEM60Q9H2L4 133 aa8.2□□□□□ -1.1
CNOT1-222ENST00000570139 GULP1Q9UBP9 304 aa8.2□□□□□ -1.1
CNOT1-222ENST00000570139 ZNF804BA4D1E1 1349 aa8.2□□□□□ -1.1
CNOT1-222ENST00000570139 XDHP47989 1333 aa8.2□□□□□ -1.1
CNOT1-222ENST00000570139 AKAP11Q9UKA4 1901 aa8.19□□□□□ -1.1
CNOT1-222ENST00000570139 LCHNA4D1U4 455 aa8.19□□□□□ -1.1
CNOT1-222ENST00000570139 OSMP13725 252 aa8.19□□□□□ -1.1
CNOT1-222ENST00000570139 SDHAP31040 664 aa8.19□□□□□ -1.1
CNOT1-222ENST00000570139 ADMP35318 185 aa8.19□□□□□ -1.1
CNOT1-222ENST00000570139 PPM1FP49593 454 aaPredicted RBP8.19□□□□□ -1.1
CNOT1-222ENST00000570139 TEKQ02763 1124 aa8.19□□□□□ -1.1
CNOT1-222ENST00000570139 EGR3Q06889 387 aa8.19□□□□□ -1.1
CNOT1-222ENST00000570139 MOGSQ13724 837 aa8.19□□□□□ -1.1
CNOT1-222ENST00000570139 C15orf52Q6ZUT6 534 aaKnown RBP8.19□□□□□ -1.1
CNOT1-222ENST00000570139 KCTD1Q719H9 257 aa8.19□□□□□ -1.1
CNOT1-222ENST00000570139 BEND7Q8N7W2 519 aaPredicted RBP8.19□□□□□ -1.1
CNOT1-222ENST00000570139 C7orf31Q8N865 590 aa8.19□□□□□ -1.1
CNOT1-222ENST00000570139 CELF1Q92879 486 aaKnown RBP8.19□□□□□ -1.1
CNOT1-222ENST00000570139 NAA15Q9BXJ9 866 aaKnown RBP8.19□□□□□ -1.1
CNOT1-222ENST00000570139 HELLSQ9NRZ9 838 aa8.19□□□□□ -1.1
CNOT1-222ENST00000570139 TNFRSF10DQ9UBN6 386 aa8.19□□□□□ -1.1
CNOT1-222ENST00000570139 MED23Q9ULK4 1368 aa8.19□□□□□ -1.1
CNOT1-222ENST00000570139 C10orf71Q711Q0 1435 aa8.19□□□□□ -1.1
CNOT1-222ENST00000570139 TAF1P21675 1872 aa8.18□□□□□ -1.1
CNOT1-222ENST00000570139 ABHD14A-ACY1A0A1B0GW23 586 aa8.18□□□□□ -1.1
CNOT1-222ENST00000570139 A6NNZ2 444 aa8.18□□□□□ -1.1
CNOT1-222ENST00000570139 ARHGEF15O94989 841 aa8.18□□□□□ -1.1
CNOT1-222ENST00000570139 FUCA1P04066 466 aa8.18□□□□□ -1.1
CNOT1-222ENST00000570139 CEACAM5P06731 702 aa8.18□□□□□ -1.1
CNOT1-222ENST00000570139 ZKSCAN1P17029 563 aaPredicted RBP8.18□□□□□ -1.1
CNOT1-222ENST00000570139 TM4SF4P48230 202 aa8.18□□□□□ -1.1
CNOT1-222ENST00000570139 ALDH5A1P51649 535 aaPredicted RBP8.18□□□□□ -1.1
CNOT1-222ENST00000570139 MANFP55145 182 aaKnown RBP8.18□□□□□ -1.1
CNOT1-222ENST00000570139 BTKQ06187 659 aa8.18□□□□□ -1.1
CNOT1-222ENST00000570139 RABEP1Q15276 862 aa8.18□□□□□ -1.1
CNOT1-222ENST00000570139 MBNL2Q5VZF2 373 aaKnown RBP8.18□□□□□ -1.1
CNOT1-222ENST00000570139 XRRA1Q6P2D8 792 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms