RNA–Protein interactions for RNA: ENST00000569827.5

CAPN3-220, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 908 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-220ENST00000569827 I3L4J1 428 aa13.36□□□□□ -0.27
CAPN3-220ENST00000569827 NEMFO60524 1076 aa13.36□□□□□ -0.27
CAPN3-220ENST00000569827 JAK2O60674 1132 aa13.36□□□□□ -0.27
CAPN3-220ENST00000569827 TUSC3Q13454 348 aa13.36□□□□□ -0.27
CAPN3-220ENST00000569827 PPM1LQ5SGD2 360 aa13.36□□□□□ -0.27
CAPN3-220ENST00000569827 C1orf210Q8IVY1 113 aa13.36□□□□□ -0.27
CAPN3-220ENST00000569827 PJA1Q8NG27 643 aa13.36□□□□□ -0.27
CAPN3-220ENST00000569827 LNX1Q8TBB1 728 aaPredicted RBP13.36□□□□□ -0.27
CAPN3-220ENST00000569827 SLC7A14Q8TBB6 771 aa13.36□□□□□ -0.27
CAPN3-220ENST00000569827 HDAC7Q8WUI4 952 aa13.36□□□□□ -0.27
CAPN3-220ENST00000569827 FGF13Q92913 245 aa13.36□□□□□ -0.27
CAPN3-220ENST00000569827 RHOBTB2Q9BYZ6 727 aa13.36□□□□□ -0.27
CAPN3-220ENST00000569827 PDZD7Q9H5P4 517 aa13.36□□□□□ -0.27
CAPN3-220ENST00000569827 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.36□□□□□ -0.27
CAPN3-220ENST00000569827 ANKEF1Q9NU02 776 aa13.36□□□□□ -0.27
CAPN3-220ENST00000569827 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.36□□□□□ -0.27
CAPN3-220ENST00000569827 SF3B1O75533 1304 aaKnown RBP eCLIP13.36□□□□□ -0.27
CAPN3-220ENST00000569827 SDK1Q7Z5N4 2213 aa13.35□□□□□ -0.27
CAPN3-220ENST00000569827 MED24O75448 989 aa13.35□□□□□ -0.27
CAPN3-220ENST00000569827 LYPLA2O95372 231 aa13.35□□□□□ -0.27
CAPN3-220ENST00000569827 SPATA31C1P0DKV0 1188 aa13.35□□□□□ -0.27
CAPN3-220ENST00000569827 FOXK2Q01167 660 aa13.35□□□□□ -0.27
CAPN3-220ENST00000569827 GUCY1B3Q02153 619 aa13.35□□□□□ -0.27
CAPN3-220ENST00000569827 UBXN2BQ14CS0 331 aa13.35□□□□□ -0.27
CAPN3-220ENST00000569827 NAB2Q15742 525 aa13.35□□□□□ -0.27
CAPN3-220ENST00000569827 LIN9Q5TKA1 542 aa13.35□□□□□ -0.27
CAPN3-220ENST00000569827 POTEHQ6S545 545 aa13.35□□□□□ -0.27
CAPN3-220ENST00000569827 RSPO2Q6UXX9 243 aaPredicted RBP13.35□□□□□ -0.27
CAPN3-220ENST00000569827 CYP26C1Q6V0L0 522 aa13.35□□□□□ -0.27
CAPN3-220ENST00000569827 ERMP1Q7Z2K6 904 aa13.35□□□□□ -0.27
CAPN3-220ENST00000569827 MAML2Q8IZL2 1156 aaPredicted RBP13.35□□□□□ -0.27
CAPN3-220ENST00000569827 FAM177A1Q8N128 213 aaPredicted RBP13.35□□□□□ -0.27
CAPN3-220ENST00000569827 NAP1L4Q99733 375 aaKnown RBP13.35□□□□□ -0.27
CAPN3-220ENST00000569827 TTPALQ9BTX7 342 aa13.35□□□□□ -0.27
CAPN3-220ENST00000569827 GOLGA2P5Q9HBQ8 144 aa13.35□□□□□ -0.27
CAPN3-220ENST00000569827 SLC2A4RGQ9NR83 387 aa13.35□□□□□ -0.27
CAPN3-220ENST00000569827 CDH7Q9ULB5 785 aa13.35□□□□□ -0.27
CAPN3-220ENST00000569827 PAPLNO95428 1278 aa13.34□□□□□ -0.27
CAPN3-220ENST00000569827 MCM7P33993 719 aa13.34□□□□□ -0.27
CAPN3-220ENST00000569827 POU5F1BQ06416 359 aa13.34□□□□□ -0.27
CAPN3-220ENST00000569827 PCBP1Q15365 356 aaKnown RBP eCLIP13.34□□□□□ -0.27
CAPN3-220ENST00000569827 ME3Q16798 604 aa13.34□□□□□ -0.27
CAPN3-220ENST00000569827 PHLDB3Q6NSJ2 640 aa13.34□□□□□ -0.27
CAPN3-220ENST00000569827 DIS3L2Q8IYB7 885 aaKnown RBP13.34□□□□□ -0.27
CAPN3-220ENST00000569827 PIK3R5Q8WYR1 880 aa13.34□□□□□ -0.27
CAPN3-220ENST00000569827 NXPE3Q969Y0 559 aa13.34□□□□□ -0.27
CAPN3-220ENST00000569827 NFKBIZQ9BYH8 718 aa13.34□□□□□ -0.27
CAPN3-220ENST00000569827 SPATA6Q9NWH7 488 aaPredicted RBP13.34□□□□□ -0.27
CAPN3-220ENST00000569827 ZNF638Q14966 1978 aaKnown RBP13.34□□□□□ -0.27
CAPN3-220ENST00000569827 PRKCBP05771 671 aa13.33□□□□□ -0.28
CAPN3-220ENST00000569827 THP07101 528 aa13.33□□□□□ -0.28
CAPN3-220ENST00000569827 TKTP29401 623 aaKnown RBP13.33□□□□□ -0.28
CAPN3-220ENST00000569827 OR1D2P34982 312 aa13.33□□□□□ -0.28
CAPN3-220ENST00000569827 CREMQ03060 361 aa13.33□□□□□ -0.28
CAPN3-220ENST00000569827 PRPF4BQ13523 1007 aaKnown RBP13.33□□□□□ -0.28
CAPN3-220ENST00000569827 MLF2Q15773 248 aaPredicted RBP13.33□□□□□ -0.28
CAPN3-220ENST00000569827 SLC5A9Q2M3M2 681 aa13.33□□□□□ -0.28
CAPN3-220ENST00000569827 AXDND1Q5T1B0 1012 aaPredicted RBP13.33□□□□□ -0.28
CAPN3-220ENST00000569827 CDCA2Q69YH5 1023 aaPredicted RBP13.33□□□□□ -0.28
CAPN3-220ENST00000569827 TSSK4Q6SA08 328 aa13.33□□□□□ -0.28
CAPN3-220ENST00000569827 PPP4R3CPQ6ZMV5 832 aa13.33□□□□□ -0.28
CAPN3-220ENST00000569827 CATSPER3Q86XQ3 398 aa13.33□□□□□ -0.28
CAPN3-220ENST00000569827 ZBTB8OSQ8IWT0 167 aa13.33□□□□□ -0.28
CAPN3-220ENST00000569827 TMEM130Q8N3G9 435 aa13.33□□□□□ -0.28
CAPN3-220ENST00000569827 C3orf58Q8NDZ4 430 aa13.33□□□□□ -0.28
CAPN3-220ENST00000569827 NSUN7Q8NE18 718 aaKnown RBP13.33□□□□□ -0.28
CAPN3-220ENST00000569827 MTMR9Q96QG7 549 aa13.33□□□□□ -0.28
CAPN3-220ENST00000569827 PLA2G2FQ9BZM2 168 aa13.33□□□□□ -0.28
CAPN3-220ENST00000569827 FZD8Q9H461 694 aa13.33□□□□□ -0.28
CAPN3-220ENST00000569827 BRMS1Q9HCU9 246 aa13.33□□□□□ -0.28
CAPN3-220ENST00000569827 PRMT7Q9NVM4 692 aaPredicted RBP13.33□□□□□ -0.28
CAPN3-220ENST00000569827 DNMT3BQ9UBC3 853 aaKnown RBP13.33□□□□□ -0.28
CAPN3-220ENST00000569827 KANSL1LA0AUZ9 987 aa13.32□□□□□ -0.28
CAPN3-220ENST00000569827 NRG2O14511 850 aaPredicted RBP13.32□□□□□ -0.28
CAPN3-220ENST00000569827 N4BP3O15049 544 aa13.32□□□□□ -0.28
CAPN3-220ENST00000569827 BRCC3P46736 316 aa13.32□□□□□ -0.28
CAPN3-220ENST00000569827 STARD6P59095 220 aa13.32□□□□□ -0.28
CAPN3-220ENST00000569827 ST3GAL1Q11201 340 aa13.32□□□□□ -0.28
CAPN3-220ENST00000569827 PADI6Q6TGC4 694 aa13.32□□□□□ -0.28
CAPN3-220ENST00000569827 DGLUCYQ7Z3D6 616 aa13.32□□□□□ -0.28
CAPN3-220ENST00000569827 NPAS3Q8IXF0 933 aa13.32□□□□□ -0.28
CAPN3-220ENST00000569827 CEP120Q8N960 986 aa13.32□□□□□ -0.28
CAPN3-220ENST00000569827 SUMF1Q8NBK3 374 aa13.32□□□□□ -0.28
CAPN3-220ENST00000569827 GTF3C6Q969F1 213 aa13.32□□□□□ -0.28
CAPN3-220ENST00000569827 MCRS1Q96EZ8 462 aa13.32□□□□□ -0.28
CAPN3-220ENST00000569827 CCDC113Q9H0I3 377 aa13.32□□□□□ -0.28
CAPN3-220ENST00000569827 CDY1Q9Y6F8 540 aa13.32□□□□□ -0.28
CAPN3-220ENST00000569827 TCHHQ07283 1943 aa13.32□□□□□ -0.28
CAPN3-220ENST00000569827 SPAG17Q6Q759 2223 aa13.32□□□□□ -0.28
CAPN3-220ENST00000569827 MAP1BP46821 2468 aaKnown RBP13.32□□□□□ -0.28
CAPN3-220ENST00000569827 ZMYM2Q9UBW7 1377 aa13.32□□□□□ -0.28
CAPN3-220ENST00000569827 EPG5Q9HCE0 2579 aa13.31□□□□□ -0.28
CAPN3-220ENST00000569827 HNRNPA1P09651 372 aaKnown RBP eCLIP13.31□□□□□ -0.28
CAPN3-220ENST00000569827 CEBPBP17676 345 aa13.31□□□□□ -0.28
CAPN3-220ENST00000569827 TARSP26639 723 aaKnown RBP13.31□□□□□ -0.28
CAPN3-220ENST00000569827 CLCNKBP51801 687 aa13.31□□□□□ -0.28
CAPN3-220ENST00000569827 OSTNP61366 133 aa13.31□□□□□ -0.28
CAPN3-220ENST00000569827 CSTF1Q05048 431 aaKnown RBP13.31□□□□□ -0.28
CAPN3-220ENST00000569827 SOX4Q06945 474 aaPredicted RBP13.31□□□□□ -0.28
CAPN3-220ENST00000569827 PABPC1LQ4VXU2 614 aaKnown RBP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms